TCONS_00058268-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058268-protein
Unique NameTCONS_00058268-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length148

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058268-protein ID=TCONS_00058268-protein|Name=TCONS_00058268-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
MCSPKRYCPKHNELLKYFCEQCKVVVCTDCMVSVEHKQHNISLVSETTAK
AKEELKQKLEKMKDKKQTMDDCLQQAKVFYKDVIDEDKVNVELIKKTFNE
VRNILAEKEEQLIAQVQAQSMLKGENLDKFSKAVHAVTQTVNYMESVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036705XLOC_036705Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058268TCONS_00058268Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005622 intracellular
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..148
NoneNo IPR availableCOILSCoilCoilcoord: 45..75
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availableCDDcd00021BBOXcoord: 6..44
e-value: 1.26051E-6
score: 41.1188
NoneNo IPR availableSUPERFAMILY57845B-box zinc-binding domaincoord: 4..63
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 3..44
e-value: 2.6E-7
score: 40.3
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 4..42
e-value: 1.1E-10
score: 41.4
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 3..44
score: 11.562
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..54
e-value: 1.9E-6
score: 27.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058268-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top