Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00058308-protein ID=TCONS_00058308-protein|Name=TCONS_00058308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=436bp MTGCAKVKNFGYDFLFNYQTVKLAEIKDKKVGLSFRVIQLAIVCYIIFYV IIYKKGYQEFDTAISTISTKMKGITHVDFTGFNSSLFNGLQVYDAEDYVI KPKDGNSLFVMTNMVITPKQYQGKCPEDPESYQALCKTDKDCQQETSNKY GHGERTGRCVPSYRNSTLTVCEIHGWCPTEDDRLPMIKSNVSTNIPLLEG TKHATVLIKNQIDFMKFDVATYNIPNTNNRTYMKKCRYNAKTDPLCPIFR LQDIVSSCGDNYTQVAFKGAIYGIIIEWKCNLDYSIEECLPKYRFKRLDN SRSSISKGFNFRYVNYYVEKGKRYRTLTKAFGIKFELLAHGKAGKFNIIP LLTNLGAGIGLLGLATLCCDFIVLNLVPKRNVYRDYICADVTQEYEEHLR EAAKEEKEEATRLKLMMVNKCAVRSPHTARKLLEML Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR001429 | P2X_purnocptor |
IPR027309 | P2X_extracellular_dom |
Vocabulary: Biological Process
Term | Definition |
GO:0033198 | response to ATP |
GO:0098655 | cation transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0001614 | purinergic nucleotide receptor activity |
GO:0004931 | extracellular ATP-gated cation channel activity |
Vocabulary: Cellular Component
Term | Definition |
GO:0005887 | integral component of plasma membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0098655 |
cation transmembrane transport |
biological_process |
GO:0033198 |
response to ATP |
cellular_component |
GO:0005887 |
integral component of plasma membrane |
molecular_function |
GO:0004931 |
extracellular ATP-gated cation channel activity |
molecular_function |
GO:0001614 |
purinergic nucleotide receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 388..416 |
None | No IPR available | GENE3D | 1.10.287.940 | | coord: 334..378 e-value: 2.1E-18 score: 65.5 |
IPR001429 | P2X purinoreceptor | PRINTS | PR01307 | P2XRECEPTOR | coord: 307..317 score: 52.57 coord: 169..180 score: 57.97 coord: 91..99 score: 47.34 coord: 326..340 score: 48.7 |
IPR001429 | P2X purinoreceptor | PIRSF | PIRSF005713 | P2X_purinoceptor | coord: 2..417 e-value: 8.3E-136 score: 450.3 |
IPR001429 | P2X purinoreceptor | PFAM | PF00864 | P2X_receptor | coord: 16..394 e-value: 1.6E-130 score: 435.3 |
IPR001429 | P2X purinoreceptor | TIGRFAM | TIGR00863 | TIGR00863 | coord: 13..385 e-value: 5.9E-126 score: 418.2 |
IPR027309 | P2X purinoreceptor extracellular domain | GENE3D | 2.60.490.10 | | coord: 59..333 e-value: 7.0E-98 score: 326.9 |
Blast
BLAST of TCONS_00058308-protein vs. Swiss-Prot (Human)
Match: P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2) HSP 1 Score: 324.709 bits (831), Expect = 2.840e-108 Identity = 163/391 (41.69%), Postives = 243/391 (62.15%), Query Frame = 0 Query: 1 MTGCAKVKNFGYDFLFNYQTVKLAEIKDKKVGLSFRVIQLAIVCYIIFYVIIYKKGYQEFDTAISTISTKMKGITHVDFTGFNSSLFNGLQVYDAEDYVIKPKDGNSLFVMTNMVITPKQYQGKCPEDPESYQALCKTDKDCQQETSNKYGHGERTGRCVPSYRNSTLTVCEIHGWCPTEDDRLPMIKSNVSTNIP---LLEGTKHATVLIKNQIDFMKFDVATYNIPNTNNRTYMKKCRYNAKTDPLCPIFRLQDIVSSCGDNYTQVAFKGAIYGIIIEWKCNLDYSIEECLPKYRFKRLD--NSRSSISKGFNFRYVNYYVE-KGKRYRTLTKAFGIKFELLAHGKAGKFNIIPLLTNLGAGIGLLGLATLCCDFIVLNLVPKRNVYRD 385
M GC FLF Y T ++ I+ +KVGL R +QL I+ Y+I +V +++KGYQE D+ +S+++TK+KG+ + + G +++D DYVI ++ NSLFVMTN+++T Q QG CPE P++ +CK+D C ++ + +G TGRCV N ++ CE+ WCP EDD T++P L+ ++ T+L+KN I + KF+ + NI TY+K C Y+AKTDP CPIFRL IV + G ++ +A +G I GI + W CNLD + CLP+Y F+RLD + ++S G+NFR+ YY + G RTL KA+GI+F+++ GKAGKF+IIP + N+G+G+ LLG+AT+ CD IVL + KR YR+
Sbjct: 1 MAGCCAALA---AFLFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVIPAQEENSLFVMTNVILTMNQTQGLCPEIPDA-TTVCKSDASCTAGSAGTHSNGVSTGRCVAF--NGSVKTCEVAAWCPVEDD----------THVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYDAKTDPFCPIFRLGKIVENAGHSFQDMAVEGGIMGIQVNWDCNLDRAASLCLPRYSFRRLDTRDVEHNVSPGYNFRFAKYYRDLAGNEQRTLIKAYGIRFDIIVFGKAGKFDIIPTMINIGSGLALLGMATVLCDIIVLYCMKKRLYYRE 369
The following BLAST results are available for this feature:
BLAST of TCONS_00058308-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match Name | E-value | Identity | Description | |
P2RX4 | 2.840e-108 | 41.69 | P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S... | [more] |
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