TCONS_00058323-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058323-protein
Unique Name	TCONS_00058323-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1152

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058323-protein ID=TCONS_00058323-protein|Name=TCONS_00058323-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1152bp
MFMSTRYKKRPEPLTRKRPIFSADDSLAKLCEVLNNESSVTKLITPKYKD
FRSQKLKFDQKTRLNNAIWRAWHIQYKMNTKARFLQFAAPFSDETQHSIS
QAVLLEGKYWRRRLDAVLHEFKKWRRLHGEKLLKNSGAMIKSISAVQGDL
SSDSELDEREDESVPKPDLPVEKSLDTLSAMYAFPDTLFSSCLDMQKDID
NNPKHQLSKDSSGMIQPSLNHLNPSFDELLDNFDFLLSSDFSNYHNSHQQ
SDNSMLSMQQQQDQQQAYTPMQHTDTTQHQSNMVHHQSHQENYPNLSNMM
FQPHSGDGAGGKHACNMQQVNDTGMQDQNSFRNEETFQQLPPQLQAPNLA
SRIQAAMSTRPKGRGKSESGKSQKRDNSGPSNSKRAKRQHSHEKALESNK
HIAQKKFPESHNNSEHHGRTNNSRPRSASSIPILPKGGNEQNHIVHPAKH
PSLFFVGSDIQPRPHHSNYTIPAAASATPHHASASAAMPYVIMSCVPVIT
QNSQPIAKNTPTIVEPQHYHHPQTYPSSQQHQYMNMMTSQQTNNRHTPIN
HHQQTQAANTHQHHNHHSGHSTPTPDNSISNQQQMLHLQNAVSQLSGIND
TQLVQLAQLLQNVPQGTEATLSYLELLQQQLHLMLKHQHENIEFKQQVQQ
QAEKMLTHQNPSSMQHSYPTNAQHQQQHQLQSATQHVSSVQSPVIVSSAQ
QQPYSSYQPQHSTYDHATNTSSKKKRGHPTTQQQHERYSRQSSLEIPLPK
NLQEKENPHTQSPVYTRSNEPTLNIPINRSSPATTLNLPQPLATNDRQQK
TSDVEQPTSSGCTTLDSAIALVALRHGSISPEVPVNLSRSIKTGEEIPAK
RITILRGGETITSSTETRPSVSTTGAVGEITISNESSASSSDNRVKEVQD
RTVYNEHRRQCHLSAEQRRRGMIKNAFEELSNMLYLNNFIQGPINGKPPK
LSNAAILQNTCDYIQELVQERASCDVNMNKIQQEIEEMRNEISKCQKRLP
SSGADTSLEGSNTVEKGFLAYCKDLIKLDRKSWIFSAIVRPLFDSYNKSV
RTKTIDDFVESVIQWVDSHFTLPNLRLVILETLTKLSTSTAILDDSDCLN
DLAASALRIDDPTDINATAEGVQQQQSTPSNPSNQLNLPSSTSSTFRTFN
KR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036733	XLOC_036733	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058323	TCONS_00058323	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 964..998
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1119..1152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 651..811
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 540..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..440
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 913..973 e-value: 2.4E-7 score: 40.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	4.10.280.10		coord: 904..999 e-value: 1.7E-12 score: 46.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 908..967 e-value: 7.6E-10 score: 38.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 907..967 score: 12.932
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 905..972 e-value: 8.04741E-10 score: 55.6831
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 906..996

Blast

[Close]

BLAST of TCONS_00058323-protein vs. Swiss-Prot (Human)
Match: MLXIP (MLX-interacting protein OS=Homo sapiens GN=MLXIP PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.011e-32
Identity = 98/315 (31.11%), Postives = 157/315 (49.84%), Query Frame = 0

Query:  811 GCTTLDSAIALVALRHGSISPEVPVN------LSRSIKTGEEIPAKRITILRGGETITSSTETRPSVSTTGAVGEITISNESSASSSD----------NRVKEVQDRTVYNEHRRQC-HLSAEQRRRGMIKNAFEELSNMLYLNNFIQGPINGKPPKLSNAAI-LQNTCDYIQELVQERASCDVNMNKIQQEIEEMRNEISKCQKRLPSSGADTSLEGSNTVEKGFLAYCKDLIKLDRKSWIFSAIVRPLFDSYNKSVRTKTIDDFVESVIQWVDSHFTLPNLRLVILETLTKLSTSTAILDDSDCLNDLAASAL 1107
            G     S+I +  L HG+ SP  PV+          +  GE++P      L GG          P V+ TG   +   S ++S  +S+          N   +   + V     RQ  H+SAEQ+RR  IK  F+ L++++  N+           KL++ AI LQ T +YI +L QER        ++++EIEE+   I  CQ+ LP++G   +    + ++  F  Y K     + K WIFS I++PLF+S+   V T ++++   + + W+D H +LP LR ++L TL +LSTST+IL D   L + A+ A+
Sbjct:  621 GVPEFHSSILVTDLGHGTSSPPAPVSRLFPSTAQDPLGKGEQVP------LHGGS---------PQVTVTGPSRDCPNSGQASPCASEQSPSPQSPQNNCSGKSDPKNVAALKNRQMKHISAEQKRRFNIKMCFDMLNSLISNNS-----------KLTSHAITLQKTVEYITKLQQERGQMQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHMKDMFDEYVKTRTLQNWKFWIFSIIIKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPMVLSTLRQLSTSTSILTDPAQLPEQASKAV 909

HSP 2 Score: 122.479 bits (306), Expect = 4.315e-28
Identity = 83/241 (34.44%), Postives = 122/241 (50.62%), Query Frame = 0

Query:   21 FSADDSLAKLCEVLNNESSVTKLITPKYKDFRSQKLKFDQKTRLNNAIWRAWHIQYKMNTKARFLQFAAPFS---DETQHSISQAVLLEGKYWRRRLDAVLHEFKKWRRLHGEKLLKNSGAMIKSISAVQGDLSSDSELDEREDESVPKPDLPVEKS--LDTLSAMYAFPDTLFSSCLDMQKDIDNNPKHQLSKDSSGMIQPSLNHLNPSFDELLDNFDFLLSSDFSNYHNSHQQSDNSML 256
             S D SL KL E +    S  KL++PK+K+F+  KL++  K RLNNAIWRAW++QY    K     F  P     D  +H   +A+  EGKYW+ R++ V+ E+ KWR    ++L ++    + S+  VQ D   D     +  +    P +P+E+   LDT   M  F DTLFS+    Q     NP+      ++ MIQP L  L P+ D  +D F+      F +  +S +    SML
Sbjct:  120 LSIDASLTKLFECMTLAYS-GKLVSPKWKNFKGLKLQWRDKIRLNNAIWRAWYMQYLEKRKNPVCHFVTPLDGSVDVDEHRRPEAITTEGKYWKSRIEIVIREYHKWRTYFKKRLQQHKDEDLSSL--VQDD---DMLYWHKHGDGWKTP-VPMEEDPLLDTDMLMSEFSDTLFSTLSSHQPVAWPNPREIAHLGNADMIQPGLIPLQPNLD-FMDTFE-----PFQDLFSSSRSIFGSML 347

The following BLAST results are available for this feature:

BLAST of TCONS_00058323-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058323-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MLXIP	1.011e-32	31.11	MLX-interacting protein OS=Homo sapiens GN=MLXIP P...	[more]

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TCONS_00058323-protein (polypeptide) - C. hemisphaerica