TCONS_00058493-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058493-protein
Unique NameTCONS_00058493-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058493-protein ID=TCONS_00058493-protein|Name=TCONS_00058493-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
MTEVSTSSISSAEVQILNRFPEESFNEFIQLVFDFLLNPKDASKLLDDLH
IFCENAGASAGAVKNLVKLLISYLREKLKKNVSSNSINDQLEKLGLSASK
LEIILEKWKQYNNVLTRSMANQVFNINQLVDMDWKFGVTAATSDEGQVGH
SFIQLKLVIDKGNKENENVCLELTLPQFYEFLHEMQKAKNSLELLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036852XLOC_036852Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058493TCONS_00058493Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017920COMM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017920COMM domainPFAMPF07258COMM_domaincoord: 126..193
e-value: 1.2E-16
score: 60.5
IPR017920COMM domainPROSITEPS51269COMMcoord: 128..196
score: 15.065

Blast
[Close]
BLAST of TCONS_00058493-protein vs. Swiss-Prot (Human)
Match: COMD7 (COMM domain-containing protein 7 OS=Homo sapiens GN=COMMD7 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.108e-44
Identity = 77/192 (40.10%), Postives = 112/192 (58.33%), Query Frame = 0 
Query:    2 TEVSTSSISSAEVQILNRFPEESFNEFIQLVFDFLLNPKDASKLLDDLHIFCENAGASAGAVKNLVKLLISYLREKLKKNVSSNSINDQLEKLGLSASKLEIILEKWKQYNNVLTRSMANQVFNINQLVDMDWKFGVTAATSDEGQVGHSFIQLKLVIDKGNKENENVCLELTLPQFYEFLHEMQKAKNSLE 193
            TE         ++Q LN+   + F+   +++F FL  PK+  + L  L  F      S G+++++VK L+      LKK++++  +      LGLS  K     EKWKQ    L R    Q   INQL+DM+WKFGVT+ +S+  +VG  F+QLKLV+ KGN + ENV +ELTLPQFY FLHEM++ + S+E
Sbjct:    7 TEDPVPEAVGGDMQQLNQLGAQQFSALTEVLFHFLTEPKEVERFLAQLSEFATTNQISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLSEEKATYFSEKWKQNAPTLARWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQLKLVVKKGN-QTENVYIELTLPQFYSFLHEMERVRTSME 197
The following BLAST results are available for this feature:
BLAST of TCONS_00058493-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COMD72.108e-4440.10COMM domain-containing protein 7 OS=Homo sapiens G... [more]
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