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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00058877-protein ID=TCONS_00058877-protein|Name=TCONS_00058877-protein|organism=Clytia hemisphaerica|type=polypeptide|length=755bp
QIKACFIMGSGSTKKSKEDREPRMDSIQNNNNSDEVSLNKDGETVVDFLQ
NFENLLQTCSGLFDDGIDAFKWATENSCNLFDQLTRSCLRNTAGGKRHLE
REEREEIASKVVISDITKHFTDCLQYIRQNYPDALEKDEKSLKNEFQSLD
EEEDSKEKLELTILFQKIICAIVGFFVNNVDVSKNFGGKCVENGTVGILL
QYVESYQNICFEEDKTDVKFENLRENKRIQTVNRVLSFHHNISKDFCEHM
VKNKAIETMAPYVNSTNPLLAMKSLLVLSHLISEEQNNMITSTDGPISIL
LQHLEGAAKSNSNRYNGFETSELLMGLSKILQNDQNKKKVGDQGGIEILS
QIIYKITSSNSEDENNMKILEFVFNCIYLLSFHEDNKENIMNNGVIVHAL
HNCSSMNNKSILIDAHGTLWELKDKKTRVPMKHQYMRSKSMKSKKATLPK
LRKKSRSHSELEWNENQQLPNARELSVNEPISGGSSETEEKEEQDEEDEQ
QPEEEEDVVIKEQKLQHIMISYQWSHQPIMLKVRDKLQEEGFTVWIDLDE
MKGSTLEAMANAVEDAYLILVTVSSNYKASANTRSEAEYAFQLKKPIIPL
MMERDYKADGWLGFIVGSKLWIDFIDENNIESSSLNNLVAEIHRQGFKPD
NENEVLKPQPSPQPSTKFSDREELRKKISQWTPDDVRKWITSNELIVNDD
VIVKHLDGYVLLHLFDLRKEAPDTFYKFLKKDLALDTLKNLFQFADCLAK
LLDDT Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0005488 | binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007165 |
signal transduction |
| molecular_function |
GO:0005488 |
binding |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 142..162 |
| None | No IPR available | GENE3D | 1.10.150.50 | | coord: 679..721
e-value: 3.4E-4
score: 20.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 8..36 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 649..669 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 431..508 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | PFAM | PF13676 | TIR_2 | coord: 518..616
e-value: 2.6E-19
score: 69.3 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | GENE3D | 3.40.50.10140 | | coord: 518..678
e-value: 6.1E-14
score: 51.9 |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | SUPERFAMILY | 52200 | Toll/Interleukin receptor TIR domain | coord: 513..630 |
| IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 192..517
e-value: 1.8E-14
score: 52.9 |
| IPR016024 | Armadillo-type fold | SUPERFAMILY | 48371 | ARM repeat | coord: 235..425 |
Blast
The following BLAST results are available for this feature:
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