TCONS_00061413-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061413-protein
Unique Name	TCONS_00061413-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	795

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061413-protein ID=TCONS_00061413-protein|Name=TCONS_00061413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=795bp
MFTMSSAGTNTDLDQHQPIENLVQKNKSIYDGGGGVSDTAVKDIDSEKAI
HTKPLDVVSPRVEKETLTCPDKALAAHHPENERINDDVFADTTNTNVNNK
TAERLDSTSSDSEKIVTDLHKQNSISDVLVSPPPVSANVKRGVFSRAYSD
PVNERTPLNSSSSETSSVASVGSAKNKMDYKSFTRAKSADDSKTLKRDNS
LEEESPEEKGKMKNRFKSLASFATLTKWWKKNVDYKRKKREKIEERKMRL
KLQYHFMTPFEKYKLGRKPWKLGIQILKILIVTTQVILFGADRFASVAFI
KNTHKSFRYMFLENFDGTPDFSLYTRRQLVKTIYHVNNVYHNITETPIGR
YWYPSHPMEPVELCEVIYRLHNESQKIDYNQDPIKVCQSVSKHSNFTNML
ENVNYFDRVVRMTIKFDLIGIYLNALILGHKPECMKLKIAIKIDNSKHDG
RLRIVLKIKEHLLMKCHDRNYVFDSGSDHTIQGILIAFDALVITVCFISL
VLCLRSVIKSIILAQAAEQYFEEYRHERLTKWDLVELINKWFPVIALSDL
LSITGSIYKIYVDRRDIMYYNVTSVFLGVGVILVWVGLLRFFTYVKNYNA
LLITLYVAAPNLLRFMFCAMFIFFGFTFCGWVVLGAYHEKFKTFLTTAEC
LYSLVNGDDMYPTFSSMPSRNISIWVFSKIYLYIFVSLFIYLILSTFISI
VGDAYERLKDYGRLPPTRIERFISGRKSPKRRSKHAACQRCEREQGLGMV
SDQSNDPLDSARSGDESADESFGGGLLSRRVFTNSQLSLVSASLE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038529	XLOC_038529	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061413	TCONS_00061413	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013122	PKD1_2_channel

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.70		coord: 373..709 e-value: 2.3E-7 score: 29.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 749..772
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
IPR013122	Polycystin cation channel, PKD1/PKD2	PFAM	PF08016	PKD_channel	coord: 571..706 e-value: 8.8E-9 score: 34.4

Blast

[Close]

BLAST of TCONS_00061413-protein vs. Swiss-Prot (Human)
Match: MCLN2 (Mucolipin-2 OS=Homo sapiens GN=MCOLN2 PE=1 SV=2)

HSP 1 Score: 332.028 bits (850), Expect = 2.452e-104
Identity = 187/530 (35.28%), Postives = 308/530 (58.11%), Query Frame = 0

Query:  242 KIEERKMRLKLQYHFMTPFEKYKLGRK-PWKLGIQILKILIVTTQVILFGADRFASVAFIKNTHKSFRYMFLENFDGTPD----FSLYTRRQLVKTIYHVNNVYHNITETPIGRYWYPSHPMEPVEL--CEVIYRL-----HNESQKIDYNQDPIKVCQSVSKHSNFTNMLENVNYFD----RVVRMTIKFDLIGIYLNALILGHKPECMKLKIAIKIDNSKHDGRLRIVL----KIKEHLLMKCHDRNYVFDSGSDHTIQGILIAFDALVITVCFISLVLCLRSVIKSIILAQAAEQYFEEYRHERLTKWDLVELINKWFPVIALSDLLSITGSIYKIYVDRRDIMYYNVTSVFLGVGVILVWVGLLRFFTYVKNYNALLITLYVAAPNLLRFMFCAMFIFFGFTFCGWVVLGAYHEKFKTFLTTAECLYSLVNGDDMYPTFSSMPSRNISIWVFSKIYLYIFVSLFIYLILSTFISIVGDAYERLKDYGR--LPPTRIERFI----SGRKSPKRRSKHAACQRCEREQ 745
            +++E  +R  L+++FM+P EKY+  R+ PWKLG+QILKI++VTTQ++ FG      VAF ++   +F+++FL+ + GT +     S+YT+    ++I+   N YH + +  +G   Y  +    + L  C+  Y+       NE+  ID + +   V   +   S      +N ++F     R++++ I F L GI L  +     P+C   +  I  DN  H G+++I      KI+E     C D N +F  GS       ++ FDA VI +C  SL+LC RS++ ++ L +    +F E     +   D  E IN W+ ++ +SDL++I GSI K+ +  +++  Y++ S+FLG   +LVWVG++R+  Y + YN L++T+  + P +LRF  CA  I+ G+TFCGW+VLG YH+KF+   T AECL+SLVNGDDM+ TF+ +  ++I +W+FS++YLY F+SLFIY+ILS FI+++ D+Y+ +K + +   P T ++ F+    S  +  K  S   +C  C R +
Sbjct:   35 EMKEECLREDLKFYFMSPCEKYRARRQIPWKLGLQILKIVMVTTQLVRFGLSNQLVVAFKEDNTVAFKHLFLKGYSGTDEDDYSCSVYTQEDAYESIFFAINQYHQLKDITLGTLGYGENEDNRIGLKVCKQHYKKGTMFPSNETLNIDNDVELDCVQLDLQDLSKKPPDWKNSSFFRLEFYRLLQVEISFHLKGIDLQTIHSRELPDCYVFQNTIIFDNKAHSGKIKIYFDSDAKIEE-----CKDLN-IF--GSTQKNAQYVLVFDAFVIVICLASLILCTRSIVLALRLRKRFLNFFLEKYKRPVCDTDQWEFINGWYVLVIISDLMTIIGSILKMEIKAKNLTNYDLCSIFLGTSTLLVWVGVIRYLGYFQAYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHDKFENLNTVAECLFSLVNGDDMFATFAQIQQKSILVWLFSRLYLYSFISLFIYMILSLFIALITDSYDTIKKFQQNGFPETDLQEFLKECSSKEEYQKESSAFLSCICCRRRK 556

The following BLAST results are available for this feature:

BLAST of TCONS_00061413-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061413-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MCLN2	2.452e-104	35.28	Mucolipin-2 OS=Homo sapiens GN=MCOLN2 PE=1 SV=2	[more]

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TCONS_00061413-protein (polypeptide) - C. hemisphaerica