TCONS_00061981-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061981-protein
Unique NameTCONS_00061981-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061981-protein ID=TCONS_00061981-protein|Name=TCONS_00061981-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MKFRSKLVDIGCIHQLTKILGTISKITKTCTLILSEQQVVFTQNERATGG
GASLWCELKQVDFFEDYRIEGKDDNNQIYLEIINENLLRALKSGQNAQCI
KIKLVKKQTPCLMFEVSLPSMTAHTRVVVHDIPVAVIPTRFWENFQRPIL
PAYDIKISLPNLKILKNIIERMKNISGFMVLSASQNGNLSCKVETEEVTA
TTYFSNMEIEKNDNNMPHRSQRRSVDIDEDDELVEARIDVQKLVTFLNVQ
QFNANKVMCGIVNGQSVHMFLQCGDMFFQYFIPAMNVSIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038852XLOC_038852Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061981TCONS_00061981Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007150Hus1/Mec3
IPR016580Cell_cycle_HUS1
Vocabulary: Cellular Component
TermDefinition
GO:0030896checkpoint clamp complex
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0000077DNA damage checkpoint
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000077 DNA damage checkpoint
cellular_component GO:0030896 checkpoint clamp complex
cellular_component GO:0005730 nucleolus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007150Checkpoint protein Hus1/Mec3PFAMPF04005Hus1coord: 1..285
e-value: 1.1E-74
score: 251.1
NoneNo IPR availableGENE3D3.70.10.10coord: 1..288
e-value: 1.5E-37
score: 128.5
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 15..113
IPR016580Cell cycle checkpoint, Hus1PIRSFPIRSF011312HUS1coord: 1..287
e-value: 8.0E-81
score: 268.9

Blast
[Close]
BLAST of TCONS_00061981-protein vs. Swiss-Prot (Human)
Match: HUS1 (Checkpoint protein HUS1 OS=Homo sapiens GN=HUS1 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 2.187e-85
Identity = 126/287 (43.90%), Postives = 189/287 (65.85%), Query Frame = 0 
Query:    1 MKFRSKLVDIGCIHQLTKILGTISKITKTCTLILSEQQVVFTQNERATGGGASLWCELKQVDFFEDYRIEG-KDDNNQIYLEIINENLLRALKSGQNAQCIKIKLVKKQTPCLMFEVSLPSMTAHTRVVVHDIPVAVIPTRFWENFQRPILPAYDIKISLPNLKILKNIIERMKNISGFMVLSASQNGNLSCKVETEEVTATTYFSNMEIEKNDNNMPHRSQRRSVDIDEDDELVEARIDVQKLVTFLNVQQFNANKVMCGIVNGQSVHMFLQCGDMFFQYFIPAMN 286
            MKFR+K+VD  C++  T+I   I+K+ KTCTL +S  ++ F   ++   GG S+WCEL+Q +FF ++++EG   +NN+IYLE+ +ENL RALK+ QNA+ +KIKL  K  PCL   V L SM++ +R+V HDIP+ VIP + W++ Q P++P  D+ I LP LK +K+++E+MKNIS  +V+ A+ +G L+ K+ETE V  TT+F ++       N P  S+    D +  + + E  ID++KL+ FL  QQ N  K +C IVN + VH  L   D+  QYFIPA++
Sbjct:    1 MKFRAKIVDGACLNHFTRISNMIAKLAKTCTLRISPDKLNFILCDKLANGGVSMWCELEQENFFNEFQMEGVSAENNEIYLELTSENLSRALKTAQNARALKIKLTNKHFPCLTVSVELLSMSSSSRIVTHDIPIKVIPRKLWKDLQEPVVPDPDVSIYLPVLKTMKSVVEKMKNISNHLVIEANLDGELNLKIETELVCVTTHFKDL------GNPPLASESTHEDRNV-EHMAEVHIDIRKLLQFLAGQQVNPTKALCNIVNNKMVHFDLLHEDVSLQYFIPALS 280
The following BLAST results are available for this feature:
BLAST of TCONS_00061981-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HUS12.187e-8543.90Checkpoint protein HUS1 OS=Homo sapiens GN=HUS1 PE... [more]
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