TCONS_00063925-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063925-protein
Unique NameTCONS_00063925-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length895

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063925-protein ID=TCONS_00063925-protein|Name=TCONS_00063925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=895bp
MKVKRTATFCLLVQLTFRLLTANGTDRKKVAHWAKLIGESAKTFSDEITA
SKHIKKAYEDLGLKIQKVDGESLTIDLANELERFFDEKVKTLRKLAEEAS
RIEDEYRENYQHHDWFNGKALQGMKLVQHANFDVPVNLTDSIVHVPTEVY
DQDSKVVRDIQWTKALNKIFQNNFEQYSGLSWQYFGTVEGVHRQFPGREW
PLPSNGFPDLYDARRRPWYIQGANSPKNVIILIDRSGSLLGSRIEIASYA
ARILVETLTTNDFFHVITFNEESDLICCHTNEQNKLLQATRGNKEYVKAL
LKQIKAEGTTDWERAIKMALQMLKKTQEDMEGSLCQQTLFILSDGSATYP
KELFEKYDPHGLVHVFAYVIGPKQYEVTQMQEMACKHKGVFLRISSIGAV
WDIVTSSTRILSRPIGRSADKPTTFTSAFVDATGGGLVSTGSTPVFKKSN
SELLGVMATDVPVKDLHEFIYYPLTGQNSYVFVIDNNGLVLIHPAINGKK
LARLNPQPNMAIEELEFAVHNHSHVKQLHREMILMNPGTPKQLKFDVYIK
SKDELRVRRIAATYHFFRSTKSPFSTGIASPKFGFFVQSPNITLKEGLKY
LKNVSDIMHWPFCPKLRRLKDTKTVMVQRIAENENKTHLDTCNHRMVHGL
LLDAKATSQLPKQWKSKREKIEENGINHIFIRTHWGVIQSIKRKNNSELI
DGGFESISRESYDPFDFYKRANHIPNRLTISLIKGRGEDDHVISIHNPIL
QKKAGITLAVTGVEMSYEKFMTTNFIEKTKEFPDEHLYDGRLTCDRHLKN
QVEGLYCYLLDENGFVVASNEEADIGLFFGEVDQNVMRKLIEEDKSHSLY
QVVTLPDYQASCKLPTNNDSSAAELKNIFTWIISLLVSLLQTSLF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040066XLOC_040066Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063925TCONS_00063925Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR013608VWA_N
IPR013680VDCC_a2/dsu
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..109
NoneNo IPR availableGENE3D3.30.450.20coord: 145..227
e-value: 0.023
score: 14.0
NoneNo IPR availableGENE3D3.30.450.20coord: 731..871
e-value: 0.0031
score: 16.9
coord: 427..582
e-value: 8.4E-13
score: 47.9
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 226..412
e-value: 4.5E-13
score: 59.4
IPR002035von Willebrand factor, type APFAMPF13768VWA_3coord: 228..390
e-value: 2.0E-13
score: 50.5
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 228..414
e-value: 8.8E-21
score: 74.2
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 228..408
score: 13.194
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 226..404
IPR013608VWA N-terminalPFAMPF08399VWA_Ncoord: 111..200
e-value: 1.8E-25
score: 89.7
IPR013680Voltage-dependent calcium channel, alpha-2/delta subunit, conserved regionPFAMPF08473VGCC_alpha2coord: 613..883
e-value: 1.8E-20
score: 73.1

Blast
BLAST of TCONS_00063925-protein vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.592e-109
Identity = 276/934 (29.55%), Postives = 459/934 (49.14%), Query Frame = 0
Query:   30 VAHWAKLIGESAKTFSDEITASKHIKKAYEDL--GLKIQKVDGESLTIDLANELERFFDEKVKTLRKLAE--EASRIEDEYRENYQHHDWFN----------GKALQ-GMKLVQHAN---FDVPVNLTDSIVHVPTEVYDQDSKVVRDIQWTKALNKIFQNNFEQYSGLSWQYFGTVEGVHRQFPGREWPLPSNGFPDLYDARRRPWYIQGANSPKNVIILIDRSGSLLGSRIEIASYAARILVETLTTNDFFHVITFNEESDLICCHTNEQNKLLQATRGNKEYVKALLKQIKAEGTTDWERAIKMALQMLKKTQEDMEGSLCQQTLFILSDGSATYPKELFEKYD-PHGLVHVFAYVIGPKQYEVTQMQEMACKHKGVFLRISSIGAVWDIVTSSTRILSRPIGRSADKPTTFTSAFVDAT-----------GGGLVSTGSTPVFKKSNSE-----LLGVMATDVPVKDLHEFIYYPLTGQNSYVFVIDNNGLVLIHPAI-----NGKKLARLNPQPNMAIEELEFAVHNHSHVKQLHREMILMNPGTPKQL-KFDVYIKSKDELRVRRIAAT--YHFFRSTKSPFSTGIA-SPKFGFFVQSPNITLKEGLKYLK--NVSDIMHWPFC-----PKLRRLKDTKTVMVQRIAENENKTHLDTCNHRMVHGLLLDAKATSQLPKQWKSKREKIEEN---GINHIFIRTHWGV------IQSIKRKNNSELIDGGFESISRESYDPFDFYKRANHIPNRL--TISLIKGRGEDDHVISIHNPI--LQKKAGITLAVTGVEMSYEKFMTTNFIEKTKEFPDEHLYDGR--LTCDRHLKNQVEGLYCYLLDENGFVVASNEEADIGLFFGEVDQNVMRKLIEEDKSHSLYQVVTLPDYQASCKLPTNNDSSAAELKNIFT-------WIISLLVSLL 890
            V  WA   G   K+ + + + S+ ++K Y++    + I+++DG  L   LA  +E  F +K + +R+L E  E + ++ E+  + Q+ ++FN          G  L+ G + +   N    ++PVN++ S V VPT +Y++D  +V  + W+++LNK+F +NF++   L WQYFG+ +G  RQ+PG +W    NG    +D R R WYIQ A SPK+V+IL+D SGS+ G R+ IA      +++TL  +DFF++I +NEE   +    N    L+QA R NKE+ +  L ++ A+G    + A+  A  +L       +GS+C Q + +++DG+      +F KY+ P   V +F Y+IG +      ++ MAC +KG F +IS++  V + V     +LSRP     +    +T A++D+T           G  L++T + PVF K N       LLGV+ TDVPVK+L + I     G + Y F I NNG +L HP +      GKK  +    PN +  +L       S V+   R+ +L N    ++  KF + +K   +   R +  T  Y++     +PFS G+A S   G +    N+T++EGL  L+  +VS    W +C     P+ R L   + + +      + K  L  C+  ++  +L DA  ++ +   W S      EN   G+   F+ T  G+      + + +  N   L  G  E+I    + P  + + A  IP     +I    G     +V++    I  L ++    +A  G++M  E F    F   +++       DG+  ++CD    N      CYL+D NGF++ S +    G FFGE++  VM KL+    +   ++ +TL DYQA C+    +   A  L + +        WI++ LV  L
Sbjct:   42 VKLWASAFGGEIKSIAAKYSGSQLLQKKYKEYEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQY-EYFNAVLINERDKDGNFLELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPGIKWEPDENGVI-AFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLN--GTLVQADRTNKEHFREHLDKLFAKGIGMLDIALNEAFNILSDFNHTGQGSICSQAIMLITDGAVDTYDTIFAKYNWPDRKVRIFTYLIGREAAFADNLKWMACANKGFFTQISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLTDDQGPVLMTTVAMPVFSKQNETRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRRK----PNYSSVDL-------SEVEWEDRDDVLRNAMVNRKTGKFSMEVKKTVDKGKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTIEEGLHDLEHPDVSLADEWSYCNTDLHPEHRHLSQLEAIKLYL----KGKEPLLQCDKELIQEVLFDAVVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGPVNKSNVVTASTSIQLLDERKSPVVAAVGIQMKLE-FFQRKFWTASRQCAS---LDGKCSISCDDETVN------CYLIDNNGFILVSEDYTQTGDFFGEIEGAVMNKLL----TMGSFKRITLYDYQAMCRANKESSDGAHGLLDPYNAFLSAVKWIMTELVLFL 942          
The following BLAST results are available for this feature:
BLAST of TCONS_00063925-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA2D31.592e-10929.55Voltage-dependent calcium channel subunit alpha-2/... [more]
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