TCONS_00065499-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065499-protein
Unique NameTCONS_00065499-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1098

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065499-protein ID=TCONS_00065499-protein|Name=TCONS_00065499-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1098bp
MSKERRKRRSYSVDIDLDRLSQLIPLNHQRKKNFNKALWKGITQRYYNLS
KPPPDSKVKHIFRQYVKTIRETHSPVAKLYCDEIEDETNTPNPQASSRIT
ESYDQTVKQTVEKVEELFTPVKDIDQEIKKVERISLNHDSVTLDRIERLA
ATIVSKTAVELTKYATERISNGNQNTEDLSNANLMNMKNIIRENQNKEDL
SNANLINMENIIHENQNAEDLSNEDLTNENIEAGLDLATNESESDTSSES
NQGNNNQNFFLSEISSTTANLLTSAQIPRDGIFTHQFKKTSFREKLPNNW
TKLKIVQCGNSAFRRFENKYREYLLPLVKEHNKYCNLIIKSQRLRKKDSR
KSSSCPFWNCYIRCKRPECNFSAKVTIENEECKYATLRFYGNVNHDIRKT
SADNISGSKRKIEHQRFEKNLKTPPSKVYGEKLAKIDPEAFAAGNREDAG
RSSKVYQKIKSEVRSPHTKKAFLHRNVQEIASKIEKEDRTEAREKKKARK
FYGYVHDVMVDKEVRITLTNEALIRLYNEKNKKDIIYLDATGSVTLPLKE
CKRILLYSICVRHPYGLTPPLPVAQYLSSSHSVSSIRQFLISVQEKEKLV
FNSISTPSLVLVDYSMAIIVACVREFCGETLPEYINRTFKIITGHEKMLT
KTLLHICFSHITRRNKYILGRLKINKETTILCMHWFSRLTECRFLGELEY
LVKLGQIVFMSPTIDAVNYGKTVNEAVEEIEKSIKQFPHIEEELKETLEE
TAVHESITNSFEADEDNLLASLEETTKSKKNEKRKPVTELSGFWDDVLST
FSVQATTNEEINNQFYAPGYFNFISTYRLPMATLWTGLCLGNLTRFGANN
HEEQQPSASKSTLKNNTTTAQVEGYFSNLKRLQGLHQPIPAFIENTYIDL
QWQMRQFYDGLLEGRSKYVLERTPKISDEDFLPNKSIKVEEGWKKREKRT
DLNEQGFYRSTRRKTLDFKPKPKFERTKEESRNICAVCKEEDNDLFECII
CHNPYHAHCAGTDIAYARVTPRFVCDRCIKSRFLPFTNYIGFKNEEETDI
AVLEFLWNSKEKXSYRLLITSGSKTKKKQTSQFWSFFGIRRKRKKNKF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041048XLOC_041048Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065499TCONS_00065499Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 984..1029
e-value: 4.6E-5
score: 32.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 847..1033
e-value: 4.3E-8
score: 32.7
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 985..1028
NoneNo IPR availableCDDcd15489PHD_SFcoord: 984..1028
e-value: 4.71395E-6
score: 44.2302
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 979..1034

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065499-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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