TCONS_00067885-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067885-protein
Unique NameTCONS_00067885-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length767

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067885-protein ID=TCONS_00067885-protein|Name=TCONS_00067885-protein|organism=Clytia hemisphaerica|type=polypeptide|length=767bp
MAGTRYLRTLFYCSIGALLGLISPSLYYGLIPRCQQNTESTMQRRNIKDI
AATSKNAALPKKKLLFAGVMTAEKFLDTRAKAVYETWGKIMPGKMMFFAS
SSSHRDDLPVVSLTGVDDSYPPQRKSMMMLKYMHDNFIDDFEWFLRADDD
VYIRTDKMEQFLRQLNSSDDLYIGQAGVGIQKEKGKLGLGLGDNFCMGGP
GVIISASTLRKVVPYLEHCLQNLYTTHEDVEVGRCIKKFVGISCTWAFEM
QSLFYHNRTGAKAYTTNLDTKAVRNAVTLHPLKRPEFMYRLHTHFMELKI
QQTSYDVVVHQRQLDIVEKLLTKDLDKQSDDKLARLKDRKMFNQKMLPKE
VPDWEMFTPRKVYSYQTNAPEIGMLNPVKDGLNHVLGQTMSIINKEARKV
LHRTLEFKRLNHGYKRYHPRYGMQYMLDLLMKYHRHVGYNRRRMTVHVRH
HAYLQQPFTSLMYAEDEQTRVQEPINFLLPLAGRLVQFKRFMGNFERICL
HQEEKASLTILYFPDEGHNSTEHKIIFESLKEKYTRANLKWINMEGRFSR
ALALTVGVAQFDKTSLLFFCDVDLEFDSAFMERCRSNTVLDQQIYYPIXE
FDSAFMERCRSNTVLDQQIYYPIVFSQFDPEMANYKQEKPESVFYYSKDT
GFWRKYAFGITCQYRRDFDLIGGFDTTIQGWGMEDVDLYDRFVLSEKHNV
FRAPDPGLVHIYHPVQCDEKIAEKQLKMCYASKAQTYGSQNKIYEVLYDR
GYFNQTKSLADDELFFY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042399XLOC_042399Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067885TCONS_00067885Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008428Chond_GalNAc
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Molecular Function
TermDefinition
GO:0008376acetylgalactosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0032580Golgi cisterna membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0032580 Golgi cisterna membrane
molecular_function GO:0008376 acetylgalactosaminyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008428Chondroitin N-acetylgalactosaminyltransferasePFAMPF05679CHGNcoord: 600..742
e-value: 6.1E-56
score: 190.2
coord: 216..598
e-value: 1.3E-114
score: 383.8
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 115..275
e-value: 0.0029
score: 16.6
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 494..758
e-value: 1.8E-20
score: 72.8
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 651..735
coord: 543..603
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 140..262

Blast
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BLAST of TCONS_00067885-protein vs. Swiss-Prot (Human)
Match: CHSS3 (Chondroitin sulfate synthase 3 OS=Homo sapiens GN=CHSY3 PE=2 SV=3)

HSP 1 Score: 594.349 bits (1531), Expect = 0.000e+0
Identity = 311/746 (41.69%), Postives = 440/746 (58.98%), Query Frame = 0 
Query:   56 NAALPKKK---LLFAGVMTAEKFLDTRAKAVYETWGKIMPGKMMFFASSSSHRDD-----LPVVSLTGVDDSYPPQRKSMMMLKYMHDNFIDDFEWFLRADDDVYIRTDKMEQFLRQLNSSDDLYIGQAGVGIQKEKGKLGLGLGDNFCMGGPGVIISASTLRKVVPYLEHCLQNLYTTHEDVEVGRCIKKFVGISCTWAFEMQSLFY----HNRTGAKAYTTNLDTKAVRNAVTLHPLKRPEFMYRLHTHFMELKIQQTSYDVVVHQRQLDIVEKLLTKDLDKQSDDKLARLKDRKMFNQKMLPKEVPDWEMFTPRKVYSYQTNAPEIGMLNPV-KDGLNHVLGQTMSIINKEARKVLHRTLEFKRLNHGYKRYHPRYGMQYMLDLLMKYHRHVGYNRRRMTVHVRHHAYLQQPFTSLMYAEDEQTRV-------------------------------------QEPINFLLPLAGRLVQFKRFMGNFERICLHQEEKASLTILYFP-DEGHNSTEHKIIFESLKEKYTRANLKWINMEGRFSRALALTVGVAQFDKTSLLFFCDVDLEFDSAFMERCRSNTVLDQQIYYPIXEFDSAFMERCRSNTVLDQQIYYPIVFSQFDPEMANYKQEKPESVFYYSKDTGFWRKYAFGITCQYRRDFDLIGGFDTTIQGWGMEDVDLYDRFVLSEKHNVFRAPDPGLVHIYHPVQCDEKIAEKQLKMCYASKAQTYGSQNKIYEVLYDR 750
             AA P  +    L+ GVMTA+K+L +RA A   TW + +PG++ FF+S            LPV++L GVDDSYPPQ+KS MM+KYMHD+++D +EWF+RADDDVYI+ DK+E+FLR LNSS  LY+GQ G+G  +E GKLGL  G+NFCMGGPG+I S   LR++VP++  CL+ +YTTHEDVEVGRC+++F G  C W++EMQ LF+    HNR   K Y  +L    +  A+TLHP KRP + YRLH + +  KI +  Y  +   R+  ++ KL   ++ K+ D +L  +     F Q     EV +WE  T + +YS   N P    L+ + +  L+  + Q M +IN+ A K   R ++FK + +GY+R +P +G++Y+LDLL+ Y RH G   R++TV VR HAYLQQ F+   + E E+  V                                     ++ ++ L+PL GR   F RFM NFE +CL  ++   L I+ F  D G +S++H  + +  + KY +A +  I M+G FSR L L +  AQFD  +LL FCDVDL F   F++RCR NT+  QQ                         +YYPI+FSQ+DP++ N      +  F +SK TGFWR Y +GITC Y+ D    GGFDT+IQGWG+EDVDLY++ +LS     FR+ + G+VHI+HPV CD  +  KQ KMC  SKA T+ S  ++ E+  ++
Sbjct:  161 GAAAPSARPRDFLYVGVMTAQKYLGSRALAAQRTWARFIPGRVEFFSSQQPPNAGQPPPPLPVIALPGVDDSYPPQKKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNIEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFHENYEHNR---KGYIQDLHNSKIHAAITLHPNKRPAYQYRLHNYMLSRKISELRYRTIQLHRESALMSKLSNTEVSKE-DQQLGVIPSFNHF-QPRERNEVIEWEFLTGKLLYSAAENQPPRQSLSSILRTALDDTVLQVMEMINENA-KSRGRLIDFKEIQYGYRRVNPMHGVEYILDLLLLYKRHKG---RKLTVPVRRHAYLQQLFSKPFFRETEELDVNSLVESINSETQSFSFISNSLKILSSFQGAKEMGGHNEKKVHILVPLIGRYDIFLRFMENFENMCLIPKQNVKLVIILFSRDSGQDSSKHIELIKGYQNKYPKAEMTLIPMKGEFSRGLGLEMASAQFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQ-------------------------VYYPIIFSQYDPKVTNGGNPPTDDYFIFSKKTGFWRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILS-GLRPFRSQEVGVVHIFHPVHCDPNLDPKQYKMCLGSKASTFASTMQLAELWLEK 871
The following BLAST results are available for this feature:
BLAST of TCONS_00067885-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHSS30.000e+041.69Chondroitin sulfate synthase 3 OS=Homo sapiens GN=... [more]
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