TCONS_00069359-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069359-protein
Unique NameTCONS_00069359-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length226

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069359-protein ID=TCONS_00069359-protein|Name=TCONS_00069359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
MSDDEGPKKAKIPRVSKPKDRDKRLIVILECASLETVKNGKTFELLNCDD
HKGILRKKGNDPANYRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLI
EINPQTRIPRTYNRFSGLMVQLLHKLSIHASNGPIKLMKVIKNPITDHLP
VGCKKLVMSYKAKKCTPPRELVPTDEPIVFVIGAMAHGKVDASYGEEDIA
ISEYPLSAALTCAKVCSAFEEQWGIT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043223XLOC_043223Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069359TCONS_00069359Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005304Rbsml_bgen_MeTrfase_EMG1/NEP1
IPR029028Alpha/beta_knot_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008168 methyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005304Ribosomal biogenesis, methyltransferase, EMG1/NEP1PFAMPF03587EMG1coord: 27..220
e-value: 1.0E-86
score: 289.4
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 11..225

Blast
[Close]
BLAST of TCONS_00069359-protein vs. Swiss-Prot (Human)
Match: NEP1 (Ribosomal RNA small subunit methyltransferase NEP1 OS=Homo sapiens GN=EMG1 PE=1 SV=4)

HSP 1 Score: 305.834 bits (782), Expect = 4.314e-106
Identity = 143/203 (70.44%), Postives = 168/203 (82.76%), Query Frame = 0 
Query:   23 KRLIVILECASLETVKNGKTFELLNCDDHKGILRKKGNDPANYRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTYNRFSGLMVQLLHKLSIHASNGPIKLMKVIKNPITDHLPVGCKKLVMSYKAKKCTPPRELVPTDEPIVFVIGAMAHGKVDASYGEEDIAISEYPLSAALTCAKVCSAFEEQWGI 225
            +RLIV+LE ASLETVK GKT+ELLNCD HK IL K G DP   RPDITHQ LLMLMDSPLNRAGLLQVYIHT+KNVLIE+NPQTRIPRT++RF GLMVQLLHKLS+ A++GP KL+KVIKNP++DH PVGC K+  S+     +  RELVP+ +PIVFV+GA AHGKV   Y E+ ++IS YPLSAALTCAK+ +AFEE WG+
Sbjct:   41 RRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGV 243
The following BLAST results are available for this feature:
BLAST of TCONS_00069359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEP14.314e-10670.44Ribosomal RNA small subunit methyltransferase NEP1... [more]
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