TCONS_00069410-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069410-protein
Unique NameTCONS_00069410-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069410-protein ID=TCONS_00069410-protein|Name=TCONS_00069410-protein|organism=Clytia hemisphaerica|type=polypeptide|length=129bp
MNNQTQTLLQECLVSTGHVECCAIFRRKDVLLRANSNGFTLSIQEMEDLS
NTFSNLSETHSRGILLKDTNYKVIRADKYSIYGKKGKEGLVMIRTSILII
LALYSADMYPSIVVEAVEKLGDYLREKGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043260XLOC_043260Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069410TCONS_00069410Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005455PFN
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005455ProfilinPRINTSPR00392PROFILINcoord: 111..128
score: 42.78
coord: 63..77
score: 35.17
coord: 98..111
score: 20.0
IPR005455ProfilinSMARTSM00392prof_2coord: 6..129
e-value: 4.5E-6
score: 36.2
IPR005455ProfilinPFAMPF00235Profilincoord: 6..128
e-value: 3.8E-30
score: 104.7
IPR005455ProfilinCDDcd00148PROFcoord: 6..128
e-value: 2.37702E-26
score: 95.8552
IPR005455ProfilinSUPERFAMILY55770Profilin (actin-binding protein)coord: 6..128
NoneNo IPR availableGENE3D3.30.450.30coord: 4..128
e-value: 8.0E-27
score: 93.6

Blast
[Close]
BLAST of TCONS_00069410-protein vs. Swiss-Prot (Human)
Match: PROF4 (Profilin-4 OS=Homo sapiens GN=PFN4 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.470e-24
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 0 
Query:   16 TGHVECCAIFRRKDVLLRANSNGFTLSIQEMEDLSNTFS-NLSETHSRGILLKDTNYKVIRADKYSIYGKKGKEGLVMIRTSILIILALYSADMYPSIVVEAVEKLGDYLREKG 128
            T HV+  A+ + ++  L   S GF ++  ++  L N F+ N  +    G+  K  +Y+ +RAD+YS+Y K    G+V+++T + +++A Y+  MYPSI VEA E LGDYLR+KG
Sbjct:   15 TKHVDSAALIKIQERSLCVASPGFNVTPSDVRTLVNGFAKNPLQARREGLYFKGKDYRCVRADEYSLYAKNENTGVVVVKTHLYLLVATYTEGMYPSICVEATESLGDYLRKKG 128
The following BLAST results are available for this feature:
BLAST of TCONS_00069410-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PROF41.470e-2438.60Profilin-4 OS=Homo sapiens GN=PFN4 PE=1 SV=1[more]
back to top