TCONS_00069708-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069708-protein
Unique NameTCONS_00069708-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1229

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069708-protein ID=TCONS_00069708-protein|Name=TCONS_00069708-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1229bp
MSAGKYSPPERLIFDVQGLIAEIKSEYFSNDQTPLDDNDTLVHKLCVRLE
NILRYGAREKYSFMGTKKDYWNFINDSLPKDEIVKFVQTIQELKSNQGKG
RALLRQALMEKCLADTLQRCAINERLTKEYYLTDSIFRNNSHLQTLVHSL
YDLNAIDFNLPHKGYDLDRSFPSFARKTFGNEPRQRRDSTMSTVSHLEND
PVHILSGHVINLASLLNSWYPENIIKTVGEETLSLKDNIEKVRQITSNFE
KLYGKITSDNSALKTELNRVKEENLKTNGDYELRLKQLNERYTSLQNMDI
SATEEKLKGLYDKLVITETELTESKVKLVSSAKENELLQNKLEISLNTQK
TLIEEKEQLREQVEQCNAEIERTKHIEHCSESTNKILEGKLSELQKVNGE
LKTKERELGNQVVQLDSQLKIRDNELESLKSAFEQSTGFVVGSFKELKNE
LNNQLLEKNSDISSMSSKNDNLIEESKSLSNQNGELQTRIETLEQKVLGE
SKKRDDLESIVQLQKQNLAVEMKHKSYLSSCMQEIWSQLVESDHVDGKTT
QQDLDYNAMTLKQESFVQKLKSLQSDHENISNLMKSKNDDMTHLQEELQK
KDTSCNEFEIQVKELQNEIAELQKNITELNNQLTNLKNDMESSQNEQVST
LSSELTQLTEEIELKSQKYEDLEKRFVELEMEMLKIKPAFEELSSEKENV
LKENEELSSTVTNLTKKLEEMRIQHQDASSSLEGFNAKENSYRNEIKTIK
QEMESLVNIKNQEIQSLKFEMSSAEMKYETAASEMRKLEDAKNDLEKLNR
SKDEKITELESNVSTCSATFRTEKEAVEREYASLQKKFDAAEEKIKITEK
EITFLKVQVAKIAKEKEEERATRINTFNKLNNVIEEKKKMALDFEEERDQ
LISDMKELKDHLVNMTKDKHELWQKKDSLEFAIRQKNEERWVDDKEAKQC
SLCLTDFSLVVRKHHCRLCGNIFCNNCSNHWLKTAHSRKKIRACRACSTT
YNEKNGAGTAAADEDNSLSDTISVHSHFESFDQNDQSDIDSNPGNFEVLD
SSSITKSGSFGPTEQITIDETTDEIKETIIPTPGEISIPVNTELENDAEN
EDSSAVESTLELDDREKIELTVYAGKRCFVPLVVAGRFYELSWEFTSAPK
DVGFGIAFKKTEEVGNEGLETLVPFSRYMSHKSVIHGKMTIDHPGLYYLC
FSNAYSRFTSKTIECFVSLSKCVIKPSPE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043407XLOC_043407Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069708TCONS_00069708Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004012Run_dom
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR009038GOLD_dom
IPR001841Znf_RING
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 732..759
NoneNo IPR availableCOILSCoilCoilcoord: 462..496
NoneNo IPR availableCOILSCoilCoilcoord: 278..298
NoneNo IPR availableCOILSCoilCoilcoord: 877..918
NoneNo IPR availableCOILSCoilCoilcoord: 648..682
NoneNo IPR availableCOILSCoilCoilcoord: 771..812
NoneNo IPR availableCOILSCoilCoilcoord: 384..407
NoneNo IPR availableCOILSCoilCoilcoord: 690..724
NoneNo IPR availableCOILSCoilCoilcoord: 817..858
NoneNo IPR availableCOILSCoilCoilcoord: 342..376
NoneNo IPR availableCOILSCoilCoilcoord: 577..646
NoneNo IPR availableGENE3D1.20.5.170coord: 616..641
e-value: 4.2E-4
score: 20.0
NoneNo IPR availableGENE3D1.20.5.340coord: 642..749
e-value: 1.7E-6
score: 27.4
NoneNo IPR availableGENE3D1.20.5.1000coord: 750..814
e-value: 0.2
score: 11.1
NoneNo IPR availableGENE3D1.20.5.50coord: 815..934
e-value: 5.4E-4
score: 19.2
NoneNo IPR availableGENE3D1.20.5.730coord: 444..527
e-value: 0.01
score: 15.3
NoneNo IPR availableGENE3D2.60.120.680coord: 1115..1219
e-value: 3.1E-19
score: 68.6
NoneNo IPR availableGENE3D1.20.5.340coord: 548..615
e-value: 0.0036
score: 17.1
NoneNo IPR availableGENE3D1.20.1170.10coord: 185..438
e-value: 0.039
score: 12.3
NoneNo IPR availableCDDcd15730FYVE_EEA1coord: 940..999
e-value: 3.79865E-23
score: 94.3876
NoneNo IPR availableSUPERFAMILY140741RUN domain-likecoord: 10..168
IPR004012RUN domainSMARTSM00593893paper3coord: 100..163
e-value: 2.8E-7
score: 40.2
IPR004012RUN domainPFAMPF02759RUNcoord: 45..162
e-value: 8.0E-17
score: 61.4
IPR004012RUN domainPROSITEPS50826RUNcoord: 36..165
score: 26.077
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 936..1003
e-value: 7.1E-24
score: 95.3
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 940..1001
e-value: 4.4E-18
score: 65.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 935..1008
e-value: 8.2E-21
score: 73.1
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 944..1002
score: 12.652
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 1115..1219
score: 12.298
IPR009038GOLD domainSUPERFAMILY101576Supernatant protein factor (SPF), C-terminal domaincoord: 1117..1217
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 950..998
score: 8.55
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 940..1003

Blast
BLAST of TCONS_00069708-protein vs. Swiss-Prot (Human)
Match: FYCO1 (FYVE and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=FYCO1 PE=1 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 8.806e-56
Identity = 243/943 (25.77%), Postives = 417/943 (44.22%), Query Frame = 0
Query:  361 EQVEQCNAEIERTKHIEHCSESTNKILEGKLSELQKVNGELKTKERELGNQVVQLDSQLKIRDNELESLKSAFEQSTGFVVGSFKELKNELNNQLLEKNSDISSMSSKNDNLIEESKSLSNQNGELQTRIETLEQ-KVLGESKKRD--DLESIVQLQKQ-------------------NLAVEMKHKSYLSSCMQEIWS---QLVESDHVDGKT-TQQDLDYNAMTLKQESFVQKLKSLQSDHENISNLMKSKNDDM--THLQEELQKKDTSCNEFEIQVKELQ-NEIAELQKNITELNNQLTNLKNDMESSQNEQVSTLSSELTQLTEEIELKSQKYEDLEKRFVELEMEMLKIKPAF----EELSSEKENVLKENEELSSTVTNLTKK---LEEMRIQHQDASSSLEGFNAKENSYRNEIKTIKQEMESLVNIKNQEIQSLKFEMSSAEMKYET----AASEM-----------RKLEDAKNDLEKLNRSK---DEKITELESNVSTC-SATFRTEKEAVEREYASLQKKFDAAEEKIKITEKEITFLKVQVAKIAKEKEEERATRINTF-NKLNNVIEEK----KKMALDFEEERDQLISDMKELKDHLVNMTKDKHELWQKKDSLEFAIRQKNEERWVDDKEAKQCSLCLTDFSLVVRKHHCRLCGNIFCNNCSNHWLKTAHSRKKIRACRACSTTYNEKNGA--GTAAADEDNSLSDTISVHSHFESFDQNDQSDIDSNPGNFEVLDS------SSITKSGSF---GPTEQITIDETT---DEIKETIIPTPGEISIPVNTELENDAENEDSSAVESTLELDDREKI-----ELTVYAGKRCFVPLVVAGRFYELSWEFTSAPKDVGFGIAFKKTEEVGNEGLETLVPFSRYMSHKSVIHGKMTIDHPGLYYLCFSNAYSRFTSKTIECFVSLSKCVI 1224
            E++ Q N E+E  K +++     N++LEGKL  LQ     L+ +E  +   +  L++                EQ+      S + L +++   LL       +M ++   + E+   L ++ GE Q   E +EQ + L E++ R+   LES  Q Q Q                   N A E+  +  LS    E+     Q +++  VD +   +  LD       Q S  +   ++  +H+ +   +K +N+ +   H+QE LQ     C+E E  ++E + +E  + ++ +  L  +L+  K   E +Q E          +L E++   +    +L  +   L +E  +++ A     +EL   KE   +E E L   V  L ++   L+E     + A+ SL G  A       ++   +Q  +SL    +QE+ +LKF++S+  M Y++    A  E            R+L+ A+  +EKL  ++    EK++   ++++ C +A  R +KE              A  E ++ T+KE+               E+  T+I  + NKL   +  +    +KM  D     D L    K L++ L+ + +DK  LWQK D+LEF  +   EERW+ D EA  C  C  +FS +VR+HHCR+CG IFC  C N+++ + H  KK R CRAC    +E  G+   + +       S  +S  S          ++ D  P +  V D         I +SGS     PTE  ++D      D    ++ P   E  +PV  + E          ++  L +D+         EL V +     +P+ VA     +SW F+S PK + F + F++ E+   +  + L+P +R  SHK  I G++ +  PG+Y L F N +SRF SK +   +++ + VI
Sbjct:  612 EELRQANRELE--KELQNVV-GRNQLLEGKLQALQADYQALQQRESAIQGSLASLEA----------------EQA------SIRHLGDQMEASLLAVRKAKEAMKAQ---MAEKEAILQSKEGECQQLREEVEQCQQLAEARHRELRALESQCQQQTQLIEVLTAEKGQQGVGPPTDNEARELAAQLALSQAQLEVHQGEVQRLQAQVVDLQAKMRAALDDQDKVQSQLSMAE---AVLREHKTLVQQLKEQNEALNRAHVQELLQ-----CSEREGALQEERADEAQQREEELRALQEELSQAKCSSEEAQLEHA--------ELQEQLHRANTDTAELGIQVCALTVEKERVEEALACAVQELQDAKEAASREREGLERQVAGLQQEKESLQEKLKAAKAAAGSLPGLQA-------QLAQAEQRAQSLQEAAHQELNTLKFQLSAEIMDYQSRLKNAGEECKSLRGQLEEQGRQLQAAEEAVEKLKATQADMGEKLSCTSNHLAECQAAMLRKDKEGA------------ALREDLERTQKEL---------------EKATTKIQEYYNKLCQEVTNRERNDQKMLADL----DDLNRTKKYLEERLIELLRDKDALWQKSDALEFQQKLSAEERWLGDTEANHCLDCKREFSWMVRRHHCRICGRIFCYYCCNNYVLSKHGGKKERCCRACFQKLSEGPGSPDSSGSGTSQGEPSPALSPASPGPQATGGQGANTDYRPPDDAVFDIITDEELCQIQESGSSLPETPTETDSLDPNAAEQDTTSTSLTPEDTE-DMPVGQDSEICLLKSGELMIKVPLTVDEIASFGEGSRELFVRSSTYSLIPITVAEAGLTISWVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQLKVRTPGIYMLIFDNTFSRFVSKKVFYHLTVDRPVI 1471          

HSP 2 Score: 140.198 bits (352), Expect = 2.636e-33
Identity = 64/174 (36.78%), Postives = 110/174 (63.22%), Query Frame = 0
Query:   10 ERLIFDVQGLIAEIKSEYFSNDQTPLDDNDTLVHKLCVRLENILRYGAREKYSFMGTKKDYWNFINDSLPK----DEIVKFVQTIQELKSNQGKGRALLRQALMEKCLADTLQRCAINERLTKEYYLTDSIFRNNSHLQTLVHSLYDLNAIDFNLPHKGYDLDRSFPSFARKTF 179
            +R+I D+Q  + E+  E F     P+ D+ T +HK   +LE +L++  +EK + +G KKDYW++    L K    ++ ++FV++I EL+++ GKGRA +R +L+ + LADTLQ+C +N ++T ++Y   S F        +V  LY+L  + F+L  +G+DLD ++P+FAR+T 
Sbjct:   11 QRIIRDLQDAVTELSKE-FQEAGEPITDDSTSLHKFSYKLEYLLQFDQKEKATLLGNKKDYWDYFCACLAKVKGANDGIRFVKSISELRTSLGKGRAFIRYSLVHQRLADTLQQCFMNTKVTSDWYYARSPFLQPKLSSDIVGQLYELTEVQFDLASRGFDLDAAWPTFARRTL 183          
The following BLAST results are available for this feature:
BLAST of TCONS_00069708-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FYCO18.806e-5625.77FYVE and coiled-coil domain-containing protein 1 O... [more]
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