TCONS_00070720-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070720-protein
Unique NameTCONS_00070720-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length622

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070720-protein ID=TCONS_00070720-protein|Name=TCONS_00070720-protein|organism=Clytia hemisphaerica|type=polypeptide|length=622bp
MDKEIKIKIEEEDFSYDGAEFTETINIKIETDSIGCNNEQGNNEQSDTAV
SHGTGMQLEEIPVQLDTFDSIKVKIETNDFDVFDQTIDTNVQSSSKIDPV
ETKTESNLGTIENELSLDLNKAASTCLNSEGSMSKAKLEEDNDSYFDVSR
SADMDESIEHDTDNPELNIKIEKDCVYISQIAKPNENRNNKDTNSNGINA
TRNQPNPSLQDKRIGAVKVITGNQRPGSSSNRFTAVASISPFIDKLNQTL
VASPSIPALIPITSSIIPKRKRNEIYDTLDSDKNQTRTVFYEEKEKEFGC
TKCGRYFASKQKLSTHIRISHKHSKAFQCQECGKCFEWKAHLNKHLKKHA
SQKEKFLLKLKGESHSNDKVPCHICNKFYSKHNLQRHINNKHSTTTQFKC
KKCEETFPVKSALNKHLKTHGDNLYECDKCNESFKFKTELHSHKVTVHNA
STYAYKCGECGAHFETKDELSFHFIIHQGAQKYQCDKCCRYFGSEIELKF
HADEHMTWSIPLPCEACGKEFTEKFDFENHKKFSKCRTFECAQCDKLFAT
KLELKNHQREHDVIETQSSSKKQSYYPKEGFSEDVYLGVMSVTKPFKCNV
CGERFSQEEKLRTHKRTHLKQN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043996XLOC_043996Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070720TCONS_00070720Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 370..392
e-value: 8.1
score: 14.1
coord: 596..618
e-value: 4.1E-4
score: 29.7
coord: 512..532
e-value: 41.0
score: 7.9
coord: 327..349
e-value: 8.4E-4
score: 28.6
coord: 298..321
e-value: 0.024
score: 23.8
coord: 483..505
e-value: 1.7
score: 17.6
coord: 398..420
e-value: 4.5E-4
score: 29.5
coord: 425..448
e-value: 0.17
score: 21.0
coord: 455..477
e-value: 0.047
score: 22.8
coord: 539..561
e-value: 0.0033
score: 26.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 457..477
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 300..321
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 485..505
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 329..349
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 598..618
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 427..448
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 541..561
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 400..420
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 596..622
score: 13.256
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 398..420
score: 11.136
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 298..326
score: 12.362
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 327..354
score: 14.087
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 483..505
score: 8.683
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 455..482
score: 11.51
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 425..453
score: 10.928
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 539..561
score: 11.24
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 371..420
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 296..349
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 406..464
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 455..505
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 511..548
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 537..561
coord: 591..618
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 596..620
e-value: 2.2E-5
score: 24.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 327..349
e-value: 0.0067
score: 16.7
coord: 398..420
e-value: 1.4E-4
score: 22.0
coord: 539..561
e-value: 0.0066
score: 16.7
NoneNo IPR availableGENE3D3.30.160.60coord: 524..548
e-value: 6.7E-10
score: 38.5
NoneNo IPR availableGENE3D3.30.160.60coord: 601..619
e-value: 7.1E-10
score: 38.4
NoneNo IPR availablePFAMPF16622zf-C2H2_11coord: 300..322
e-value: 1.7E-4
score: 21.1
NoneNo IPR availableGENE3D3.30.160.60coord: 383..409
e-value: 9.0E-9
score: 35.1
coord: 410..434
e-value: 6.0E-10
score: 38.8
coord: 469..490
e-value: 6.0E-8
score: 32.4
NoneNo IPR availableGENE3D2.20.28.10coord: 549..600
e-value: 2.2E-5
score: 23.6
NoneNo IPR availableGENE3D2.10.69.10coord: 435..468
e-value: 5.5E-9
score: 35.6
coord: 307..341
e-value: 9.2E-14
score: 50.9
NoneNo IPR availableGENE3D3.30.160.60coord: 342..382
e-value: 1.7E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..212
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 182..306
e-value: 2.6E-4
score: 20.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 491..523
e-value: 0.0026
score: 17.1

Blast
BLAST of TCONS_00070720-protein vs. Swiss-Prot (Human)
Match: ZN782 (Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.654e-40
Identity = 105/330 (31.82%), Postives = 160/330 (48.48%), Query Frame = 0
Query:  295 EKEFGCTKCGRYFASKQKLSTHIRISHKHSKAFQCQECGKCFEWKAHLNKHLKKHASQKEKFLLKLKGESHSNDKVPCHICNKFYSKHNLQRHINNKHSTTTQFKCKKCEETFPVKSALNKHLKTH-GDNLYECDKCNESFKFKTELHSHKVTVHNASTYAYKCGECGAHFETKDELSFHFIIHQGAQKYQCDKCCRYFGSEIELKFHADEHMTWSIPLPCEACGKEFTEKFDFENHKK-FSKCRTFECAQCDKLFATKLELKNHQREHDVIETQSSSKKQSYYPKEGFSEDVYLGVMSVT----KPFKCNVCGERFSQEEKLRTHKRTH 618
            EK + C +CG+ F+ K +L  H R +H   K ++C  C K F  K+ L  H + H  +K                  CH C K ++  ++       H+    F+C +C ++F   S L  H +TH G+  Y+CD+C ++FK K+ L  H  T  +     YKC +CG  F  K +L  H  IH G + Y+C+ C   F  +  L+ H   H T   P  CE CGK F +K +   H++  +  + +EC +C K F+ K  L+ HQR H   +  + ++       E FS+   L V   T    KP+KC+ CG  FSQ+  LR H++ H
Sbjct:  391 EKPYECPECGKAFSEKSRLRKHQR-THTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKP---------------FECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRT--HTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTH-TGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKPYNCNQ-----CGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFSQKSSLREHQKAH 696          

HSP 2 Score: 119.398 bits (298), Expect = 4.898e-28
Identity = 109/391 (27.88%), Postives = 165/391 (42.20%), Query Frame = 0
Query:  304 GRYFASKQKLSTHIRISHKHSKAFQCQECGKCFEWKAHLNKHLKKHASQK--------------------EKFLLKLKG--------------------ESHSNDK-VPCHICNKFYSKHNLQRHINNKHSTTTQFKCKKCEETFPVKSALNKHLKTH-GDNLYECDKCNESFKFKTELHSHKVTVHNASTY--------------------------AYKCGECGAHFETKDELSFHFIIHQGAQKYQCDKCCRYFGSEIELKFHADEHMTWSIPLPCEACGKEFTEKFDFE-NHKKFSKCRTFECAQCDKLFATKLELKNHQREHDVIETQSSSKKQSYYPKE---GFSEDVYLGVMSVT----KPFKCNVCGERFSQEEKLRTHKRTH 618
            G+ F+ K  +  H R+ H   K F   E GK F   + L  H + HA+ K                    +K  ++ K                     +SH+ +K   C  C K +S+ +  R     H+    +KC  C++ F  KS L  H +TH G+  +EC +C +SF +K+ L  H+ T      +                           YKC ECG  F+ K  L  H   H G + Y+C++C + FG + +L+ H   H T   P  C  CG+ F++K +   +H+  +  + ++C +C K F  K  L+ HQR H        + ++ Y   E    FSE   L     T    KP+ CN CGE FSQ+  LR H+RTH
Sbjct:  291 GKSFSQKSHIREHHRV-HIGVKPF---EYGKSFNRNSTLPVHQRTHATDKYSDYHPCTETFSYQSTFSVHQKVHIRAKPYEYNECGKSCSMNSHLIWPQKSHTGEKPYECPECGKAFSEKSRLRKHQRTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIH-TGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTH--------TGEKPYECNECGKAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTH 668          

HSP 3 Score: 89.3521 bits (220), Expect = 1.606e-18
Identity = 68/219 (31.05%), Postives = 103/219 (47.03%), Query Frame = 0
Query:  276 YDTLDSDKNQTRTVFYEEKEKEFGCTKCGRYFASKQKLSTHIRISHKHSKAFQCQECGKCFEWKAHLNKHLKKHASQK------------EKFLLKLKGESHSNDK-VPCHICNK-FYSKHNLQRHINNKHSTTTQFKCKKCEETFPVKSALNKHLKTH-GDNLYECDKCNESFKFKTELHSHKVTVHNASTYAYKCGECGAHFETKDELSFHFIIHQG 479
            +  +   +N  RT      E+ + C +CG+ F  K  L  H R +H   K ++C +CGK F  K+ L  H + H  +K            +K  L++   +H+ +K   C  C K F  K NL+ H    H+    ++C +C + F  KS L KH +TH G+  Y C++C E+F  K+ L  H+ T  +     YKC +CG  F  K  L  H   H G
Sbjct:  487 FSHMSGLRNHRRT---HTGERPYKCDECGKAFKLKSGLRKHHR-THTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGH-QRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRT--HTGEKPYKCDKCGRTFSQKSSLREHQKAHPG 698          
The following BLAST results are available for this feature:
BLAST of TCONS_00070720-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7823.654e-4031.82Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 ... [more]
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