TCONS_00070896-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070896-protein
Unique Name	TCONS_00070896-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	811

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070896-protein ID=TCONS_00070896-protein|Name=TCONS_00070896-protein|organism=Clytia hemisphaerica|type=polypeptide|length=811bp
MPKNIYLQHLHSQTLGQKIKIQKVPADVIYSNSKTKDHQVALNCIQTLDS
NNFAKIFHGDLALETLRKLAKLYEESEGNYRFQPYVDRNGKETLLTDDIH
LFGGVEVIMRTLFHPTVDVKKPSKHVSNDMQLKIQCLCLDILNNLSAASQ
RIAKFVGQYEFLFKYLFNTMEHDITFVAASTLLEELLAANRKIIDLSSIK
NLHTLVSNLTDEHFPGFCRILSSTVADIDLTEERSTLIAQDKEDKSRFKE
RALVEQNQGVLLGFPEFLLKMVKLASRPVPRRVNNYYVLNSNPAPQYLFP
SIEEVHEQLASISQSINNSSNGATGSSSNSGASNIFSSSFASSSSSSQRS
NSNVSSPSTSLQISPSSSSTSQQDRAAQARETIRPMINFQVSLMQEIMHK
VEVLYVLTLFLCGKSKKEVQCKLGELKFIPVLGELFDKLSWNTDSDERFP
RFNHPDSEESDYSPENALKIQFLRFIHSFCDHNEKRYLLLSAREIQEMKD
LCSKCATPKPTSLDKSKSKYRCQGTKGIMSKIIETLTKTNPNNALRFWLS
RAIEGFLRGAVSAPDQHFLMNRGLIKHLVEHIVNDDTKSKEIIQSSFDLL
GELMKFNSAGFQNFNDAVENEQQFEKFLSVMTSNVVDSNMFIRSAVLSHE
KFVSDGTNLKCRLGNTIKKWEHKIYLMYKLVTAISVDSLTQENVSCLNTT
LIFLMFAYNHGQLDKYLQAFLTEEQAQKHPGLILSNLYELLRFWRNHYLS
RKKDCEQLEQSSSISFDQWRLVVDVMLNEDKNKRTSILYYLTPHHRSSMR
FCAVDFPCRDV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044085	XLOC_044085	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070896	TCONS_00070896	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022162	DUF3689
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022162	Protein of unknown function DUF3689	PFAM	PF12463	DUF3689	coord: 419..719 e-value: 1.0E-99 score: 333.6
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 59..530 e-value: 0.027 score: 13.3 coord: 531..741 e-value: 0.15 score: 10.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..378
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 62..237 coord: 526..625

Blast

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BLAST of TCONS_00070896-protein vs. Swiss-Prot (Human)
Match: TP4AP (Short transient receptor potential channel 4-associated protein OS=Homo sapiens GN=TRPC4AP PE=1 SV=2)

HSP 1 Score: 403.29 bits (1035), Expect = 1.319e-128
Identity = 229/700 (32.71%), Postives = 378/700 (54.00%), Query Frame = 0

Query:  101 LFGGVEVIMRTLFHPTVDVKKPSKHVSNDMQLKIQCLCLDILNNLSAASQRIAKFVGQYEFLFKYLFNTMEHDITFVAASTLLEELLAANRKIIDLSSIKNLHTLVSNLTDEHFPGFCRILSSTVADIDL-TEERSTLIAQDKEDKSRFK-ERALVEQNQGVLLGFPEFLLKMVKLASRPVPRRVNNYYVLNSNPAPQYLFPSIEEVHEQLASISQSINNSSNGATGSSSNSGASNIFSSSFASSSSSSQRSNSNVSSPSTSLQISPSSSSTSQQDRAAQARETIRPMINFQVSLMQEIMHKVEVLYVLTLFLCGKSKKEVQCKLGELKFIPVLGELFDKLSWNTDSDERFPRFNHPDSEESDYSPENALKIQFLRFIHSFCDHNEKRYLLLSAREIQEMKDLCSKCATPKPTSLDKSKSKYRCQGTKGIMSKIIETLTKTNPNNALRFWLSRAIEGFLRGAVSAPDQHFLMNRGLIKHLVEHIVNDDTKSKEIIQSSFDLLGELMKFNSAGFQNFNDAVENEQQFEKFLSVMTSNVVDSNMFIRSAVLSHEKFVSDGTNLK-------CRLGNTIKKWEHKIYLMYKLVTAISVDSLTQENVSCLNTTLIFLMFAYNHGQLDKYLQAFLTEEQAQKHPGLILSNLYELLRFWRNHYLSRKKDCEQLEQSSSISFDQWRLVVDVMLNEDKNKRTSILYYL 791
            LFGGV++++  L  PT+ ++     +S++M       CL IL N    ++ + K + +      +LF  M    TF+  +TL+E++L   +++I L  + NL +LVSN   +    FCRIL+ T++++D   +++ TL+A++ + K       +  E NQ  LL  P F+ ++ KLA+R V         L            +EE +  L + +  ++     A   S ++ AS +F    AS  +    +++    P +                               + +M EIM+K+EVLYVL + L G+ + +V   + E K IP L  LFDKL W   S        H  ++  D SP+  LKIQFLR + SF DH+E +YLLL+ +E+ E+  +  K   P+  ++  +     C G +G+++++++ + K    ++ RFW +RA+E FLRG  S  DQ FL+ RGL++H++  IV+ + KS++++QS FDLLGELMKFN   F+ FN  +  + +F+ FL  + S++VDSNM +R   LS ++F  +  ++K       CRL   I +   ++  +++L+  I V +LTQENVSCLNT+L+ LM A    +L  YL+     E ++K+PG +L+N + LLRFW+ HYL + KD   LE SS ISF  W+  V ++LN D+   ++++ Y+
Sbjct:  133 LFGGVDLLVEILMRPTISIRGQKLKISDEMSKD----CLSILYNTCVCTEGVTKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQQLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLSIPGFVERLCKLATRKVSESTGTASFLQE----------LEEWYTWLDN-ALVLDALMRVANEESEHNQASIVFPPPGASEENGLPHTSARTQLPQS-------------------------------MKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGLNNLFDKLIWRKHSASALVLHGH--NQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRF-ENQVDMKVAEVLSECRLLAYISQVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYI 783

The following BLAST results are available for this feature:

BLAST of TCONS_00070896-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070896-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TP4AP	1.319e-128	32.71	Short transient receptor potential channel 4-assoc...	[more]

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TCONS_00070896-protein (polypeptide) - C. hemisphaerica