TCONS_00071007-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071007-protein
Unique Name	TCONS_00071007-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	598

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071007-protein ID=TCONS_00071007-protein|Name=TCONS_00071007-protein|organism=Clytia hemisphaerica|type=polypeptide|length=598bp
MLKLNVSSYFVGRLRKFSQRTEGKEMAEVTDDDTQTKVPKQASDTKQPSA
VPEYIFKLGRGLLSVLLIWLVGWFGFSHAWIVAAYVLYVFWCQKKQQRQQ
KWLATRYFSDYENLKSLKNLPSWICIPDVENAEWLNKVIAQVWPFVSTMV
GDILKNEVELEIQKKMPSSIPLLKSFKFHEADLGNHPLTIDGVKVYKDHL
RADEIIMDICISYAGDLEVKVGFGAITAGITKIQLRGQLRVELKPLLPRA
PLIGGMTVSFLEVPEFDFDLTNLLNVLDLPGVSSILHECLEEVIQSFIVL
PNKVTIPFADDPAVQKALLHQPPMGVLQVKIISGRDLKASDKKIFSKDSS
DPYVICKVASHKHKTEIQEDTLNPVWNETFVLFVDTLIGTKIKFDVWDSD
PGKDDDLGKADISILDIVEKQNFKEQNLKLSSGKTGSLDVQCGWLTFSDD
VTQMQKPSMDLTCTAALFVTIVNAKDLPVIDFDKNTCNAFAEIEVQDGKD
SKTKQTKTQRHTTDPVWNESFFFTIKEIKENSKTTIKIMDHGCEDSLGEM
SFNLNNLLSEDKMTCKKTFSLENSTAKNPTLAVTLQLKALVKGDAETK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044126	XLOC_044126	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071007	TCONS_00071007	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR031468	SMP_LBD

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008289	lipid binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 466..566 e-value: 3.2E-15 score: 66.6 coord: 326..426 e-value: 2.4E-19 score: 80.3
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 93..455 e-value: 6.9E-29 score: 100.0
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 325..422 e-value: 3.5E-21 score: 75.3 coord: 467..564 e-value: 9.7E-14 score: 51.4
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 460..598 e-value: 7.9E-20 score: 70.8
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 327..411 score: 14.911
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 452..551 score: 13.431
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 314..435
IPR000008	C2 domain	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 463..573
IPR031468	Synaptotagmin-like mitochondrial-lipid-binding domain	PFAM	PF17047	SMP_LBD	coord: 128..308 e-value: 1.8E-35 score: 121.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..45

Blast

[Close]

BLAST of TCONS_00071007-protein vs. Swiss-Prot (Human)
Match: ESYT2 (Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 7.131e-81
Identity = 176/606 (29.04%), Postives = 309/606 (50.99%), Query Frame = 0

Query:   14 LRKFSQRTEGKEMAEVTDDDTQTKVPKQASDTKQPSAV-----PEYIFKLGRGLLSVLLIWLVGWFGFSHAWIVAAYVLYVFWCQKKQ--QRQQKWLATRYFSDYENLKSLK----NLPSWICIPDVENAEWLNKVIAQVWPFVSTMVGDILKNEVELEIQKKMPSSIPLLKSFKFHEADLGNHPLTIDGVKVYKDHLRADEIIMDICISYAG----DLEVKVGFGAITAGITKIQLRGQLRVELKPLLPRAPLIGGMTVSFLEVPEFDFDLTNLLNVLDLPGVSSILHECLEEVIQSFIVLPNKVTIPFADDPAVQKALLHQP-PMGVLQVKIISGRDLKASDK--KIFSKDSSDPYVICKVASHKHKTEIQEDTLNPVWNETFVLFVDTLIGTKIKFDVWDSDPGKDDDLGKADISILDIVEKQNFKEQNLKLSSGKTGSLDVQCGWLTFSDDVTQMQKPSMDLTC----------TAALFVTIVNAKDLPVIDFDKNTCNAFAEIEVQDGKDSKTKQTKTQRHTTDPVWNESF-FFTIKEIKENSKTTIKIMDHGCEDSLGEMSFNLNNLLSEDKMTCKKTFSLENSTAKNPTLAVTLQLKAL 590
            LR   QR  G  ++       +   P +    + P  V     P  + +L R    +L ++ +G+ G S +W V   +  + WC++ +  +  +   A     D E +  L     +LP+W+  PD E AEWLNK +  +WPF+   +  + +  +E  ++     +   L +F F + D+G  PL I+GVKVY +++   +II+D+ IS+ G    DLE+K  F    AG+  IQ+ G +RV L+PL+   PL+G +++ FL  P  + + T L N+LD+PG++ +    + ++I +++VLPN++T+P   +  VQ A L  P P GVL++  I  +DL+  D   K   K  SDPY I +V +   ++ + ++ L+P WNE +   V    G +++ +++D DP KDD LG   I +++ VEK+   ++   L     G L ++  WLT   + + + K   D+            +A L + + +A++LP      +  N   ++ V      K +++K +  T +PVW E+F FF     +++ +  ++   H C  SLG +   L+ LL+ + MT  + F L NS   N T+ + + L+ L
Sbjct:   69 LRGHRQRGAGAGLSR--PGSARAPSPPRPGGPENPGGVLSVELPGLLAQLARSFALLLPVYALGYLGLSFSW-VLLALALLAWCRRSRGLKALRLCRALALLEDEERVVRLGVRACDLPAWVHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEPAVR----GANTHLSTFSFTKVDVGQQPLRINGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYF--CRAGVKSIQIHGTMRVILEPLIGDMPLVGALSIFFLRKPLLEINWTGLTNLLDVPGLNGLSDTIILDIISNYLVLPNRITVPLVSE--VQIAQLRFPVPKGVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYEALVYEHPGQELEIELFDEDPDKDDFLGSLMIDLIE-VEKERLLDEWFTLDEVPKGKLHLRLEWLTLMPNASNLDKVLTDIKADKDQANDGLSSALLILYLDSARNLPSGKKISSNPNPVVQMSV----GHKAQESKIRYKTNEPVWEENFTFFIHNPKRQDLEVEVRDEQHQC--SLGNLKVPLSQLLTSEDMTVSQRFQLSNS-GPNSTIKMKIALRVL 655

The following BLAST results are available for this feature:

BLAST of TCONS_00071007-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071007-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ESYT2	7.131e-81	29.04	Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 ...	[more]

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TCONS_00071007-protein (polypeptide) - C. hemisphaerica