TCONS_00071325-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071325-protein
Unique NameTCONS_00071325-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071325-protein ID=TCONS_00071325-protein|Name=TCONS_00071325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
LHHQTGHHHHRLSRRDQRDHQQIVSRERTFITLYDYDPYTMGTTDRPDLQ
LSLKKGEVITVLGEVDIEGYFTAVINGRRGLVPSNFVEEYSHSSHAAHNH
TREEHFQGTVQVDGISGPPYAPRDLKVKRVVTRNAVLLSWLLPSMDDHYI
SNGCKVIGYRLWVNGQRKQDVTNPSCNKALIDDVDLAGRVEFSIQTIGES
DVCSEKCHFAITGALSTLETNETLEMEGDHDVFVALYDYDPVKSSPNPNP
ALELLFREGDMMIVYDKSRSDGFYSAKMNGKKGLVPSNFIERVNRRSTHK
TSATSSRHSSSIRSSRHVTSHHDSDSNSRKVQFDSKSSIKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044326XLOC_044326Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071325TCONS_00071325Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR011511SH3_2
IPR003961FN3_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 252..267
score: 30.3
coord: 231..241
score: 43.9
coord: 281..293
score: 36.04
IPR001452SH3 domainSMARTSM00326SH3_2coord: 231..294
e-value: 7.0E-13
score: 58.8
coord: 28..91
e-value: 9.4E-14
score: 61.7
IPR001452SH3 domainPFAMPF14604SH3_9coord: 235..291
e-value: 4.3E-8
score: 32.8
IPR001452SH3 domainPROSITEPS50002SH3coord: 25..92
score: 12.942
IPR001452SH3 domainPROSITEPS50002SH3coord: 228..295
score: 13.597
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 22..96
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 230..298
NoneNo IPR availableGENE3D2.30.30.40coord: 63..229
e-value: 3.0E-15
score: 55.1
NoneNo IPR availableGENE3D2.30.30.40coord: 230..294
e-value: 5.1E-16
score: 57.7
NoneNo IPR availableGENE3D2.30.30.40coord: 295..332
e-value: 0.16
score: 11.3
coord: 12..62
e-value: 1.8E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR011511Variant SH3 domainPFAMPF07653SH3_2coord: 35..89
e-value: 1.4E-10
score: 40.6
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 116..194

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071325-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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