TCONS_00071584-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071584-protein
Unique NameTCONS_00071584-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length628

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071584-protein ID=TCONS_00071584-protein|Name=TCONS_00071584-protein|organism=Clytia hemisphaerica|type=polypeptide|length=628bp
MMELGKILLVSIVIATVSIKDSVNSEDAAEMEKYAKKYLTKYGYKSNWLL
IYSKYSYEKDLRTFQAYFGQRVSGVLTEETYSLMKQERCGMSDVGFRLGK
ETEQEKKHDFVLQGTKWTKNTILWDFKSFPKHSKQQREKYNKIITKSFER
WSKHTNLRFEKSSLNPDIVINITKDFHRDPYPFTKEFKDLGHAFYPLSQR
GLAGDIHLNQDLVEGKADADFNWLFTHMIGHSLGIEHTNDPTSIMYPINK
NFQNEADFQISTGDRLAVQQLYGKPPALKTTVKTQKTKPTTGTIQTSTVK
QSVDKITTTPPAMRISTLTTPATTTTSPTTTTTSPTTTKTTPTTTTTTTT
IPKTTTTTSTTTTTTPITTTTIPVTTTTTPTTTTTIPSKSTITTPSRTTT
TQLNVNRKTCPEFEVTALVYYPFHKRLLVYLQSDKIMMVNSKGVSYTTSR
YALIARRGEYLKCVDASATVRIRAKDYMVVFSKDSYFLYHLRYFQFASGP
HSIHNGQNPLKLKMPPWVHKIDASMTIKGQLYIFNTRYVWKTNLNNLQIT
DEGQAKNIQNVFPGVPNDLSAAFSGVHQEKMLTYFVKNDLIYLYNERTKK
VMDGYPKHWGETILNCKDAGKNVINVRH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044478XLOC_044478Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071584TCONS_00071584Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021190Pept_M10A
IPR018487Hemopexin-like_repeat
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR001818Pept_M10_metallopeptidase
IPR000585Hemopexin-like_dom
IPR002477Peptidoglycan-bd-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 166..194
score: 38.56
coord: 84..97
score: 43.82
coord: 144..159
score: 38.26
coord: 260..273
score: 38.33
coord: 224..249
score: 43.06
IPR018487Hemopexin-like repeatsSMARTSM00120HX_rpt_3coord: 521..567
e-value: 5.6E-4
score: 29.2
coord: 573..616
e-value: 3.2
score: 11.7
IPR018487Hemopexin-like repeatsPROSITEPS51642HEMOPEXIN_2coord: 566..616
score: 9.857
IPR018487Hemopexin-like repeatsPROSITEPS51642HEMOPEXIN_2coord: 518..565
score: 9.546
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 113..274
e-value: 1.3E-14
score: 64.6
NoneNo IPR availablePIRSFPIRSF001191MMP_stromelysincoord: 1..628
e-value: 2.6E-62
score: 209.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..396
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 111..275
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 19..281
e-value: 9.9E-50
score: 168.7
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 116..273
e-value: 5.1E-27
score: 94.6
IPR000585Hemopexin-like domainGENE3D2.110.10.10coord: 416..619
e-value: 5.8E-21
score: 75.1
IPR000585Hemopexin-like domainSUPERFAMILY50923Hemopexin-like domaincoord: 430..618
IPR002477Peptidoglycan binding-likeSUPERFAMILY47090PGBD-likecoord: 28..94

Blast
[Close]
BLAST of TCONS_00071584-protein vs. Swiss-Prot (Human)
Match: MMP25 (Matrix metalloproteinase-25 OS=Homo sapiens GN=MMP25 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.168e-30
Identity = 77/263 (29.28%), Postives = 126/263 (47.91%), Query Frame = 0 
Query:   38 YLTKYGY----KSNWLLIYSKYSYEKDLRTFQAYFGQRVSGVLTEETYSLMKQERCGMSDVGFRLGKETEQEKKHDFVLQGTKWTKNTILWDFKSFPKHSKQQREKYNKIITKSFERWSKHTNLRFEK----SSLNPDIVINITKDFHRDPYPFTKEFKDLGHAFYPLSQRGLAGDIHLNQD--LVEGKADADFNWLFT---HMIGHSLGIEHTNDPTSIMYPINKNFQNEAD-FQISTGDRLAVQQLYGKPPALKTTVKTQK 286
            +LT+YGY          + S       ++  Q + G   +G +   T + M++ RC + DV   LG      ++  + L G+ W K T+ W  +SFP+ S+  +E    +++ +   W   + L F +        PDI+I+  + FH+D YPF      L HAF+P  +  ++GD H + +     G  D +   LF    H  GH+LG+ H++ P SIM P  +    + D +++S  DR  +QQLYGK P       T+K
Sbjct:   35 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPDV---LGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMESGLTFHEVDSPQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFP-GEHPISGDTHFDDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQDDRDGLQQLYGKAPQTPYDKPTRK 293
The following BLAST results are available for this feature:
BLAST of TCONS_00071584-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMP258.168e-3029.28Matrix metalloproteinase-25 OS=Homo sapiens GN=MMP... [more]
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