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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00071597-protein ID=TCONS_00071597-protein|Name=TCONS_00071597-protein|organism=Clytia hemisphaerica|type=polypeptide|length=781bp
MNLSHYHDALRIFKEIETVRKDILGERHNDYLTTKHNIGHCLMNLSHHHD
ALRIFKEIETVEKDTLGERHNSYLSTKHNIGHCLMNLSHHQEALRIFKEI
ETVRKDILGERHNDYLTTKHAIGHCLVKLSHYHDALRIFKEIETVEKETL
GERHNDYLSTKHNIGHCLMNLSHYHDALRIFKEIETVRKDILGERHNDYL
TTKHNIGHCLMNLSHHHDALRIFKEIETVEKDTLGERHNSYLSTKHNIGH
CLMNLSHHQEALRIFKEIETVRKDILGERHNDYLTTKHAIGHCLVKLSHY
HDALRIFKEIETVEKETLGERHNDYLSTKHNIGHCLMNLSHYHDALRIFK
EIETVRKDILGERHNDYLTTKHNIGNCLMDLSHHHDALRIFKEIETVQKD
TLGERHNSYLTTKHNIGQCLTDLSHHHEALRIFKEIETVQKDTLGERHND
YLTTKHNIGNCLMDLSHHHDALRIFKEIETVEKETFGERHNSYLATKHNI
GRCLMNLSHHHDALRIFKEIEAVKKDTLGERHNDYLTTKHGIGQCLMNLS
HYHEALRIFKEIEIVWNKTIGQRHGNYLIGKIYIGECLKRMKAFDDALQI
FESSKPILSEVFGDHHDRYLRNDFHIGHVLTMKGRFDDALKILESTQTKQ
IEIFDKSHLEVLKTTSVIGRCLAERGLFDKAHDTLSQTLEDGLQVLDKEH
LIILSIRINLAHCLFGMKKIEEAMIHLTEVEEISLQRFGDHHSIYREAVE
MKEHHEQKQKQKEEGVDVSPVTERMQSAKLE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0004045 | aminoacyl-tRNA hydrolase activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004045 |
aminoacyl-tRNA hydrolase activity |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 452..485
e-value: 140.0
score: 4.9
coord: 704..737
e-value: 40.0
score: 9.7
coord: 116..149
e-value: 330.0
score: 1.6
coord: 158..191
e-value: 75.0
score: 7.3
coord: 200..233
e-value: 150.0
score: 4.7
coord: 410..443
e-value: 310.0
score: 1.9
coord: 578..611
e-value: 320.0
score: 1.8
coord: 242..275
e-value: 75.0
score: 7.3
coord: 494..527
e-value: 190.0
score: 3.7
coord: 284..317
e-value: 330.0
score: 1.6
coord: 368..401
e-value: 130.0
score: 5.2
coord: 326..359
e-value: 75.0
score: 7.3
coord: 32..65
e-value: 150.0
score: 4.7
coord: 74..107
e-value: 75.0
score: 7.3 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 75..141
e-value: 6.0E-8
score: 32.8
coord: 368..437
e-value: 3.9E-9
score: 36.6
coord: 583..645
e-value: 3.6E-7
score: 30.3
coord: 452..525
e-value: 2.4E-7
score: 30.8
coord: 243..309
e-value: 5.7E-8
score: 32.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 751..781 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 90..172
e-value: 1.3E-13
score: 50.5
coord: 257..341
e-value: 1.2E-13
score: 50.6
coord: 2..89
e-value: 2.9E-13
score: 49.4
coord: 426..502
e-value: 1.3E-13
score: 50.5
coord: 173..256
e-value: 4.3E-13
score: 48.9
coord: 681..769
e-value: 4.2E-9
score: 36.1
coord: 601..680
e-value: 9.5E-6
score: 25.3
coord: 342..425
e-value: 6.5E-14
score: 51.5 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 503..551
e-value: 9.9E-5
score: 21.9
coord: 552..600
e-value: 0.016
score: 14.8 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 530..645 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 3..184 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 658..738 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 405..556 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 159..352 |
| IPR018171 | Peptidyl-tRNA hydrolase, conserved site | PROSITE | PS01195 | PEPT_TRNA_HYDROL_1 | coord: 367..380 |
| IPR018171 | Peptidyl-tRNA hydrolase, conserved site | PROSITE | PS01195 | PEPT_TRNA_HYDROL_1 | coord: 451..464 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 1..527
score: 12.966 |
Blast
The following BLAST results are available for this feature:
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