TCONS_00072093-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072093-protein
Unique NameTCONS_00072093-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length524

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072093-protein ID=TCONS_00072093-protein|Name=TCONS_00072093-protein|organism=Clytia hemisphaerica|type=polypeptide|length=524bp
VTEGVDALFFNVVILGMLQTPLGKVWHKNQQDYVIIEMTTTHTNSVSNFM
AMLPQTRCATPQETINFYKNDEVISPTKYCQLNLLSLEPFRRVHTYLEAY
VAGEEILNQLAYFVASEEALTILQKVAMLEMFVRKCGVLNPTWMEIRNFV
YFFNMQLMDSENCIYTSVECSEMFPGFKNFVLKFLLRMAKDFSTRSLGDD
DTNKLESGGFLLELKTKWEQSHHPYLFFNKDGGTFTFFGLNINQAGDLVH
KRPNGSNEIVEPQLMNSKLHGILSENMKFDIVNFASDYQKLPREKKLTIL
YRVLIGGSDFNFDPDPNYQLTVDNMKKMLAIFTRIKCSIPVILMGETGCG
KTSLITFMCKILAKSKEASNLVLVKIHGGVTKQHIMQHVQNAKKLAKKSG
DKKTILFFDEANTTDAIGLIKEIIIDKSLNGELLGLEENNMVVIAACNPY
RRHSQDMIERLESAGLGYHVGTDQTYEKIGQIPLRQLVYRVHPLPESMKP
LVWDFGQLDDVTEELYTREIVNSA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044778XLOC_044778Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072093TCONS_00072093Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 337..473
e-value: 8.3E-6
score: 35.3
NoneNo IPR availableGENE3D3.40.50.300coord: 289..466
e-value: 3.4E-12
score: 45.8
NoneNo IPR availableCDDcd00009AAAcoord: 340..463
e-value: 2.62695E-8
score: 50.9927
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 341..462
e-value: 1.8E-8
score: 34.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 322..462

Blast
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BLAST of TCONS_00072093-protein vs. Swiss-Prot (Human)
Match: RN213 (E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens GN=RNF213 PE=1 SV=3)

HSP 1 Score: 360.918 bits (925), Expect = 3.204e-110
Identity = 215/554 (38.81%), Postives = 305/554 (55.05%), Query Frame = 0 
Query:    1 VTEGVDALFFNVVILGMLQTPLGKVWHKNQQDYVIIEMTTTHTNSVS-------------NFMAMLPQTRCATPQETINFYKNDEVISPTKYCQLNLLSLEPFRRVHTYLEAYVAGEEILNQLAYFVASEEALTILQKVAMLEMFVRKCGVLNPTWMEIRNFVYFFNMQLMDSENCIYTSVE-CSEMFPGFKNFVLKFLLRMAKDFSTRSLGDDDTNK----------LESGGFLLELKTKWEQSHHPYLFFNKDGGTFTFFGL----NINQAGDLVHKRPNGSNEIVEPQLMNSKLH-GILSENMKFDIVNFASDYQKLPREKKLTILYRVLIGGSDFNFDPDPNYQLTVDNMKKMLAIFTRIKCSIPVILMGETGCGKTSLITFMCKILAKSKEASNLVLVKIHGGVTKQHIMQHVQNAKKLAKKSGDK---KTILFFDEANTTDAIGLIKEIIIDKSLNGELLGLEENNMVVIAACNPYRRHSQDMIERLESAGLGYHVGTDQTYEKIGQIPLRQLVYRVHPLPESMKPLVWDFGQLDDVTEELYTREIVN 522
            V  G+    F ++IL  L    GK+W +N     I+E+    T+  S             +F+ + P+  C  P+E I+   +           L     E F+R + YL  +   ++ L+   Y   S E          L+ F+  CGV+NP+W E+RNF  F N QL D E  ++ +     +   GFK FV+ F++ MA+DF+T SL   D +            E       L+ +WE   HPY+FFN D  T TF G     NIN + D +    + + ++++  +M   L+ G+L + + F++     D+ KLPR KKL  L   L  G     DPD  Y+LT DNM K+LAI  R +C IPVI+MGETGCGKT LI F+  +      A  + LVK+HGG T   I   V+ A+ +A  + D+    TILFFDEANTT+AI  IKE++ D  ++G+ L  E++ + +IAACNPYR+HS++MI RLESAGLGY V  ++T +++G IPLRQLVYRVH LP S+ PLVWDFGQL DV E+LY ++IV 
Sbjct: 2062 VQTGIWVFLFKLLILQYLMDINGKMWLRNPCHLYIVEILERRTSVPSRSSSALRTRVPQFSFLDIFPKVTCRPPKEVIDMELSALRSDTEPGMDLWEFCSETFQRPYQYLRRFNQNQD-LDTFQYQEGSVEG----TPEECLQHFLFHCGVINPSWSELRNFARFLNYQLRDCEASLFCNPSFIGDTLRGFKKFVVTFMIFMARDFATPSLHTSDQSPGKHMVTMDGVREEDLAPFSLRKRWESEPHPYVFFNDDHTTMTFIGFHLQPNINGSVDAIS---HLTGKVIKRDVMTRDLYQGLLLQRVPFNV-----DFDKLPRHKKLERL--CLTLGIPQATDPDKTYELTTDNMLKILAIEMRFRCGIPVIIMGETGCGKTRLIKFLSDLRRGGTNADTIKLVKVHGGTTADMIYSRVREAENVAFANKDQHQLDTILFFDEANTTEAISCIKEVLCDHMVDGQPLA-EDSGLHIIAACNPYRKHSEEMICRLESAGLGYRVSMEETADRLGSIPLRQLVYRVHALPPSLIPLVWDFGQLSDVAEKLYIQQIVQ 2599
The following BLAST results are available for this feature:
BLAST of TCONS_00072093-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RN2133.204e-11038.81E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens... [more]
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