TCONS_00072528-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072528-protein
Unique NameTCONS_00072528-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length660

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072528-protein ID=TCONS_00072528-protein|Name=TCONS_00072528-protein|organism=Clytia hemisphaerica|type=polypeptide|length=660bp
MNIFALSRNAFKNTIYTSIIKQTSFSTRTTFSSLANQNQCRLCGSKLNTG
ARNVFRIKSIRFKGTSTKVEDGNTKEKLTRLLSLAHPERWRIGGAVGLLL
FSSAVSMSVPFFIGKLMDIIFSDPQSNEEMLKRLKEMCFLLGFVFAAGAV
ANTGRIYMMQTSGQRIVQRLRSNAFRSVISQEVAFFDKEKSGELINRLAT
DTSLVSRAITDNISDGLRATSQAIGGVSLMVYTSPKLAGISLVVVPPIVL
FAVLYGRYVRKITKNVQDKLAESSSVAEEKFANIRTVRAFGQESKEMNLY
NAVVTDIYDLARKEAIARSLFYGYNGFTGNMIAMMVLYSGGCMMIDSQIT
VGDLTSFMLYTVYVGVSIAGLGSFYTELMRGLGASSRLWQLVDKKPTIPL
TGGSDILRVIADNSIDFKTIDFYYPSRPDVQILDEFNMKVKSGDICAIVG
ESGSGKTTIGSLLLRYYDVNKGGIDVGGHDIRSFDPTSLRQYIGTVSQEP
ALFSMTIGENISYGATHDVTTDDIIDAAKKANAYKFISDFPDGFDTLVGE
RGQMLSGGQRQRIAIARAIIKNPKILLLDEATSALDAESEHLVQDALQKL
MHGRTTIIIAHRLSTIKSANQIAVLQKGRIAEIGSYYDLLTKEDGLFKQL
VDRQNFQVEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045009XLOC_045009Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072528TCONS_00072528Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 442..628
e-value: 5.2E-16
score: 69.2
NoneNo IPR availableGENE3D3.40.50.300coord: 412..651
e-value: 1.4E-73
score: 246.9
NoneNo IPR availableGENE3D1.20.1560.10coord: 70..397
e-value: 4.2E-70
score: 235.7
NoneNo IPR availablePIRSFPIRSF002773ABC_prm/ATPase_Bcoord: 3..660
e-value: 1.7E-237
score: 788.2
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 415..654
e-value: 2.09318E-124
score: 370.332
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 433..583
e-value: 9.6E-32
score: 110.3
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 417..652
score: 23.69
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 98..363
e-value: 4.8E-59
score: 200.2
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 94..380
score: 52.692
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 77..396
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 555..569
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 407..654

Blast
[Close]
BLAST of TCONS_00072528-protein vs. Swiss-Prot (Human)
Match: ABCBA (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2)

HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0
Identity = 311/579 (53.71%), Postives = 433/579 (74.78%), Query Frame = 0 
Query:   80 RLLSLAHPERWRIGGAVGLLLFSSAVSMSVPFFIGKLMDIIFSDPQSNEEMLKRLKEMCFLLGFVFAAGAVANTGRIYMMQTSGQRIVQRLRSNAFRSVISQEVAFFDKEKSGELINRLATDTSLVSRAITDNISDGLRATSQAIGGVSLMVYTSPKLAGISLVVVPPIVLFAVLYGRYVRKITKNVQDKLAESSSVAEEKFANIRTVRAFGQESKEMNLYNAVVTDIYDLARKEAIARSLFYGYNGFTGNMIAMMVLYSGGCMMIDSQITVGDLTSFMLYTVYVGVSIAGLGSFYTELMRGLGASSRLWQLVDKKPTIPLTGGSDILRVIADNSIDFKTIDFYYPSRPDVQILDEFNMKVKSGDICAIVGESGSGKTTIGSLLLRYYDVNKGGIDVGGHDIRSFDPTSLRQYIGTVSQEPALFSMTIGENISYGA--THDVTTDDIIDAAKKANAYKFISDFPDGFDTLVGERGQMLSGGQRQRIAIARAIIKNPKILLLDEATSALDAESEHLVQDALQKLMHGRTTIIIAHRLSTIKSANQIAVLQKGRIAEIGSYYDLLTKEDGLFKQLVDRQNF 656
            +LL LA+PER R+  AVG L  SS +SMS PFF+GK++D+I+++P  +      L  +C  L  VF  GA AN  R+Y+MQTSGQRIV RLR++ F S++ QEVAFFDK ++GELINRL++DT+L+ R++T+N+SDGLRA +QA  G+S+M + SP LA   L VVPP+ + AV+YGRY+RK+TK  QD LA+++ +AEE+  N+RTVRAFG+E  E+  Y + V  +  LARKEA AR+ F+G  G +GN+I + VLY GG +M  + +TVG+L+SF++Y  +VG+SI GL SFY+ELM+GLGA  RLW+L++++P +P   G  +       +++FK + F YP+RP+V I  +F++ + SG + A+VG SGSGK+T+ SLLLR YD   G I + GHDIR  +P  LR  IGTVSQEP LFS +I ENI+YGA     VT ++I   A+ ANA  FI +FP GF+T+VGE+G +LSGGQ+QRIAIARA++KNPKILLLDEATSALDAE+E+LVQ+AL +LM GRT ++IAHRLSTIK+AN +AVL +G+I E G + +LL+K +G++++L+++Q+F
Sbjct:  159 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYS--DNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFNEGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKPNGIYRKLMNKQSF 735
The following BLAST results are available for this feature:
BLAST of TCONS_00072528-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCBA0.000e+053.71ATP-binding cassette sub-family B member 10, mitoc... [more]
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