TCONS_00004279 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004279
Unique NameTCONS_00004279
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length638

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004279 ID=TCONS_00004279|Name=TCONS_00004279|organism=Clytia hemisphaerica|type=transcript|length=638bp
ATTGAAGAGCATCGGATAAACatcaacaaaatcaaaatgaagattttcat
CGCCGCCGTTCTTATTGCTGcatgCTACGCCGCAGAACCATGTCCAAACT
CACTCTGCAAATGGAGAGAAGATGGATTTTCCGCCCGAGTCAGTGATGAT
CATCCAGGATTTTTCTTCCAATGTTCCAACTGGATCGCTTATTGTTTCGA
TTGCCCAGCCAACACAGTTTTCGATAACCACTTGAGAGTTTGTGTCAACC
GAAAGACCACTACCACTACCACTACAACTACTACCACCACTACCACCACC
ACACCCCCACCACCAAAATGTCCACAAAGCTTATGCAACTGGCAACCCGT
TGGAGCTTTAGTCAGCTACCCAGGAAAACCAACCTACTACGTTCAATGCG
CCAACACTGGAGCTGTTTGCAGAAAGTGTCCAGACGGTCTTGTCTTCAGA
AATGGAATCGATGTTTGCGTCCGTCCTCCAATCTCAAAACATGGCAAAAA
ACATTAAACGTCGACGATTTCGCCGAACTCCCTCAACTCCTCTCTCTCTT
GTCtctttgtaaattttgataTACATGTATATTATTTCTttgttagtttt
tgtttttgatcaaaTATATATTTCTGcataaataaaag
Run BLAST on NCBI

protein sequence of TCONS_00004279-protein

>TCONS_00004279-protein ID=TCONS_00004279-protein|Name=TCONS_00004279-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
IEEHRININKIKMKIFIAAVLIAACYAAEPCPNSLCKWREDGFSARVSDD
HPGFFFQCSNWIAYCFDCPANTVFDNHLRVCVNRKTTTTTTTTTTTTTTT
TPPPPKCPQSLCNWQPVGALVSYPGKPTYYVQCANTGAVCRKCPDGLVFR
NGIDVCVRPPISKHGKKH
Run BLAST on NCBI

transcript from alignment at sc0000041:311324..323382-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004279 ID=TCONS_00004279|Name=TCONS_00004279|organism=Clytia hemisphaerica|type=transcript|length=12059bp|location=Sequence derived from alignment at sc0000041:311324..323382- (Clytia hemisphaerica)
ATTGAAGAGCATCGGATAAACATCAACAAAGAATCAAAATGAAGATTTTC
ATTGCCGTCGTCCTTATTGCTGGTAAGTTTGTCTCTCTTATTTGTCTAAA
CCAAAGATTGCAAATCTCTAAACAATGATTTTTCTGACAATGTATAAACA
ATGGAAGTTCTGCCGTTCGCCGTTTCTTTTTACACTGGACTGATGTTTAG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTGTCCAGACGGTCTTGTCTTCAGAAATGGAATCGATGTTTGCGT
CCGTCCAGCTTCTGGCAAAAAACATTAAATGTCAACGACGTCTACGAACT
CCCTCAACTCCTCTCTCTTGCCTCTTTGTAAATTTTGATATACATGTATA
TGTCTTTGTTATTGTTTTGTTTTTGATCAAAATATATATTTCTGCACAAT
GAAAGTAAATCTTCTAACCCTTGTCTATTCTTGATTCTGTAAAGATCTGA
TGCCAAGTATACTAAATTTTCCTAATCGAAGAACTACAACATCTCAACAG
ATATAGCCTTTCTTTTTTGATTAAGTGGTAAGTAAATTGTAGTGGTCGAA
AAAGAGAGTGGGTTCTAAAAAGAGATAATCAAGAAATTTTCGCTACACAA
TGATAAACTCTAGTCAAAAATGTTCATATACATAAACGTTAACTAAAAAT
TATTTGACTGTAAATGATTTTGTAAAAATACTTGAGAATTCAACTTTTCA
CTTAGANCCCACAACAACCACCACCACCACCACACCTCCACCACCAAAAT
GTACGTATACACGCTGTCTCATTCCTCATTTTCAGGGACCTCCTTTTTTG
GCCTTATAAAACTGAAAAATTCTCTCAACATACACAATGGTTTGCAAATA
ATTTCTTTAAATTAAACTTTTTTCTCAAATCTTAGGCCCACAAAGCTTAT
GCAATTGGCAACCTGTTGGAGCTTTAGTTAGCTACCCAGGAAAACCAACC
TACTACGTTCAATGCGCCAACACTGGAGCTGTTTGTAGAAAGTGTCCAGA
CGGTCTTGTCTTCAGAAATGGAATCGATGTTTGCGTCCGTCCAGCTTCTG
GCAAAAAACATTAAATGTCAACGACGTCTACGAACTCCCTCAACTCCTCT
CTCTTGCCTCTTTGTAAATTTTGATATACATGTATATGTCTTTGTTATTG
TTTTGTTTTTGATCAAAATATATATTTCTGCACAATGAAAGTAAATCTTC
TAACCCTTGTCTATTCTTGATTCTGTAAAGATCTGATGCCAAGTATACTA
AATTTTCCTAAACGAAGAACTACAACATCTCAACAGATATAGCCTTTCTT
TTTTGATTAAGTGGTAAGTAAATTGTAGTGGTCGAAAAAGAGACTGGGTT
CTAAAAAGAGATAATCAAGAAATTTTCGCTACACAATGATAAACTCTAGC
CAAAAATGTTCATATACATAAACGTTAACTAAAAATTATTTGACTGTAAA
TGATTTTGTAAAAATACTTGAGAATTCAACTTTTCACTTAGAAAACCATT
GAATTTTGGTTCCAGTTGAAAAACAAACTGTAATTCCCTCCCATCGCACC
ATCAAAAGGAAAGATATTTATTGTATCTGTGCACCTTGCTCGGTTTGGTT
CAACATACTTTGTTTGCGCCCATATTATCTAAGGTGATAAGAATAAAGTT
TGATGAGTTTTTTATTCAGCCATCGCAAAACTAATCAAAATAACTGTAAG
CAGAAAATTTCTGATTGCCACTTAACCCTTTCCCTTGACAGAGATTTCAG
ACCTTTACAAAATAGGCTGTTCTTATATCCATACAGGGGTGAACGGACCA
ATGAAGTATAAGCCCGAAGGGCTAGAAGTCAATCTCCTTGGTAGGATTTG
AAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGCGGCTCGCCTGGT
TTTTACACAAATGACAGATTGAAACTAAAATCTACCGCTAAATTTCGAAA
AAAATATCAATCGTAAACAAAGGAATTGCTAGATTCAATCCATCGTCAAA
AATACGGCGCATTTTTTAAGGCTTCACTTTTTCTTGCCTGAGAAAGGTTA
GAGATTGAACTCTAACCCTTCAGGCTTTAAACTCAATGGAACGGACCTCT
TCTTGAAAAATGACATAACACCCTATAGAAAATTGTAACATTTTAAGTAT
TGAAAAATTGTTACTGTTATACCGTGATTCAAACGTTGCACTGACAAAAA
CAATCTTTATTTCAGTGAACCTTTCAACCCTCTGTAAAAGTCATGCTAGG
TTCCTGTCATGAGAAAAGTCTCCCCTCCCCCTTTGGAAAAGAAACGATCT
TGTCGATTCACTCCTGGAAAAATGAAACGTAGGTTGACTGAAATGCAATG
GTCTTTTGTTCTTTCTTTACAAATAATTTTCAACTGCCTCTCCCCCTCCC
CTTGTCACATAAAAACTAACCCCTGAGTGGATTGATATTTGCATGAACTT
TTTTTCGCGAATTGAGAATCTAAACTTACGTCTTATGATTAAAGTTCGCA
AATAAACCTCTTTTTAACCTAATTTCTTTCATTTTCCTCGGGGTCTGGGC
TGAAGCTCGGATTTTAAATTTTTCACATGGACTAAATTTTGCAAAAAAGG
GCCAAAATAGCGAAAATCATAAAAACTGATTCACGCGAATTTAATCTACG
TAAGATAAACATTTAACTGGCTCTCTATCAAAAAAAAACTAAGGAGCTCA
TTAGCAACACCCTGACGCAAAGAGTTCATCCCTTTAGTCCCAAAGTTATA
GTCTTACTGATTTAAAAATCAATTTTTTGAGCCCCCTGAAGGAAAAGGAA
AGGAAAAGGAAAGGAGGTAAAAAAAGTCCACCCCCTCCCTCCATCGTTGC
TAATTGGCAACAAACACAAAAATGAATGCAGATAAGGAAGGGATTTTAGT
AGCTAGCCAATTTCTAAAATCCTGAAGTTGTCTTACAATCTTTAAATTTG
AAACACCGAAATTTGTGGGGAAGTCAGCGAATGTGCAGCGACAAGCACAA
ACTTTCATCTCCGCAATTTTTATGCATTGATCATCATTTGTCTTTTCACG
AATAAGTATTGAAGAGAATGATAAGCCAACATAACATGAATTTTCCTAAT
GAAGATAAATTCCAGAAACATATATCATAAGTTTATCAGGAGAAAGTAAC
TTGAATAAAGAGCTGCGACAAAAAAAAAACATTGTCGTGGCAACAATGAA
AACAAAATATTTGGCAGAATGACCAACGATTCCGAGTGACCTTAAAAATG
TCAGCCACCTGAGTCTAAAATATAATGGATAGTTGTTTGTTTGTTTTATT
TTTTTATATTTTGTAACCGAAAGAGCTTTAAAATGATCTAGAAATATTAA
AGTTGAAGTAAGTAGAACTGAGAACGTCCTTTAGGCAAAATATTTCCAGC
AACAATTTTTTTTTTGCAAGAGTACGTTGGAAATTAAGACCAGTGATCTA
AGAAGATGAAGTGTACATGAACGGAGAGAATCAAACAGAGGGATCGAAAA
AAATGCCGCACTCGCAACAAGAAACACACGTTGATAGGGCGTCTTCACTT
AAACCACACAAACAGTTAATCACTGAATGTCTGTCAGGAATTTAAAAGAA
CCAATCAGCACAAAGATGTTGATTAAAATTTGTGGTAAGGAAGTCATTAG
GGGGAATCAATGTTCCAATTAACGATCAATTATCTTTCCACTATAAATAG
TGGAAAAAATCAAGGCTCAAGCATCCACTTTCAATTNCAGCTTTCCACTA
TAAATAGTGGAAGAAATCAAGGCTCAAGCATCCATATTCAATTGAAGAGC
ATCGGATAAACATCAACAAAATCAAAATGAAGATTTTCATCGCCGCCGTT
CTTATTGCTGGTAAGTTTCTTTAGTGAAACCAAAGATTCCTGATTCTTAC
AAAATGATGGTTCTGTCAATGTATAAACAAAACAAAAGTTCTGCATTTCA
CCATCCCCAAAATGTACTGATGTTTTGCATACTTTTTCTTTTTAGCATGC
TACGCCGCAGAACCATGTCCAAACTCACTCTGCAAATGGAGAGAAGATGG
ATTTTCCGCCCGAGTCAGTGATGATCATCCAGGATTTTTCTTCCAATGTT
CCAACTGGATCGCTTATTGTTTCGATTGCCCAGCCAACACAGTTTTCGAT
AACCACTTGAGAGTTTGTGTCAACCGAAAGACCACTACCACTACCACTAC
AACTACTACCACCACTACCACCACCACACCCCCACCACCAAAATGTACGT
TCAATGTAGTTTCCTTTTATTTCTTACTGCTAACTCTAACCAATATACCT
TTCAAATACATTAGCTCCCTTTTTTCTAGCACTTATATTTATTGCACTTA
AGCCACTGAATCCGAGGATGACTTTTTGATTATTTTCTAAACCGATATCC
TTAACATTCCAGGTCCTAAAAGCTTGTGTAATTGGCAACCCGTTGGAGCT
TTAGTCAGCTACCCAGGAAAACCAACCTACTACGTTCAATGCGCCAACAC
TGGGGCTGTTTGCAGAAAGTGTCCAGACGGTCTTGTCTTCAGAAATGGAG
TCGATGTTTGCGTCCGTCCTCCAGTCTCAAAACATGGCAAAAAACATTAA
ATGTCAATGATGTCGCCGAGCTCCCTCAACTCCTCTCTCTTGCATCTTTG
TAAATTTTGATATACATTTATATTTCTTTGTTAGTTTTTTGTTTTTGATC
AAATATATATTTCTGAACAATGAAAGTAATCCTGTGTGTTGAAGATTTAT
TTTTCGATATGGGAAATAACATATGGGGGACCTAATTACCGGGGTCAATA
ACAACAGGGTAATTATACCGAAGCCTGGACATTTAAATCCAAATAAGGAA
CTCTTCTTTTCAAAAAATAGTAACAAGGTTTAGGGGGGTGTAGGAAAAAA
TCGAAATATTAACAAGCAGGGGTCGTTTATTAGGCACCTGAGAGTGACCG
GTTTATTGCAACTGCTATGCTACTAAGGGTCAAATAATGAACAAACAATA
CTTCCTAAGAAATTCTCCGCTGCCAAAATGCATCCTGCAAAATGCTTTCT
TTCAGAAACTTCTAAAAGAGTTAAAAGCTTCACGAAGCCTGTATAGATAA
GCTAAATGGAAAGTCAAAGTTATACGAAAGAATCAGTAACTTTTTGTGAT
CAAGAAGCTGTTTTCAAATAAATCTCGTGTCCTTTTTAGTTTCATGGAGT
TGTTCAGAGGAAAAATAATTTTCAAGTCATATCAAACGTAGCCTTAGAAA
ATTTATTTAAAACCAGAGAGGATTACCTGAATCTTGTTTTACTTTGGAAG
TCACCGTTGTGTGTCACCTTTATCGGTCCATAAAATACTATATCCATTTG
TATTAATTGACCTGTGAAAAAAGGGAAGAATGAAAAAACAAACATAACAA
ACTAGAAAGCTGAATGACGCTACCTGATATGATTGAAGTTTGACGAGTTT
GACTAAGTAAAGTAAGCAAAGCAAAAACAGTTTAAAGCAAGCAGATCCAG
AAAAATAATTTAGCGAACGAACGATTGAACACACAAAAAGCCCGTGCGAT
TAAATCTGTAAATATAAAATGATTTTCTTTTTACAAAGTGACATCTGTAT
GGAAATTTTGAAAATTTTCCAATTGCCACTATGAACTTTAAGGAAATTTA
AGAACAGTACTTCTGATAATAACGGGTGATAACGGGTTCTTTCGGCGGTT
TTGAAAACCCAGCTGGCACACAACGTTGTTTCAACGTTTATCTAACGTTC
ACAACGTCCATACAACGTTAGATGAACGTTCAAAATATTGTGTCCAGCTA
TGGCTCAATATATTCACAACTGCTACCACCGCCCATCAAGACTTTTCCTA
ATGGGAGGAAAGGAGATTGCATCGCAAGAAGNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTAGATGAACGTTATGAACGTTGTTACAA
CGTTGTGTGCCAGCTGGGAAGTTCATTCTCAAAATCAGTTTTTTTTGGAA
ATCAACATTGGCTGGCAGATCTCAAGTATTACAGGTCAAAGGGTGTATTT
AAATTTACACTGAAAGTTTCAAGCTAATGGCCTTAACGTGTCCAAATCAT
ATATGTTGTTACTGATGTACGTAAAACGTTTAAGCGAAAGTAATAATTGC
GTTTGTTTCTTTGACGTAGGTTCGAAGCAGCTCAAAATGTTGCAGCAATG
ATTTTAAAATTACCAAACGGTTCAAAATACAACAAATTCACGTTGATTCA
CACACTTCAAGGATTGCTTTCTCGGTATGATAAAACTATTGTTTTACCAT
ATCAACACAAAATCATGGTTTTGGCATGATGAAGTTTGCTTGAAATACGA
TCACGCAATCGTGCAAAGTTAGATAATAAGAGCCAAAGGAGAAGATCGTG
CAGTTCCTTGTCCCATATTTTCAAGCAACTTTTAAACTACAGTGTGAATA
CACCCAAAATCCTACTTAAATTTAGTAGCACCCCTTACATACCCAGTTAT
CAAGATATTACATTTAGTTTAATGACAATTCAAGAAAACAGTTTCTCCGG
CGATCTTGAAGTCTGACTCTAAAAATCAGTTTTGCTGGAAATGAAACGCT
GCAGGCAAATCTCAAGTATCGTAGATAAAAATCCTGTTTAAATCTAGTAG
CTCCCCTTTAATGTGCCAGATATTACATTTAGTTTAATGAAAAGTAGATC
GAATTAATCTACTATGTGGGTTTCAAATATATTAACCGGTAATTNCCCCT
TTAATGTCCCAGATATTGCATTTAGTTTAATGGCAAGTAGATCGAATTAA
TCTACTATGTGGGTTTCAAATATATTAACCGGTAATTTCCGGTTACGATT
GTTAAGATCTAAGAATGTAGACCTCGAATTAAAAAATATTAGTTGTTTTC
CATTTTAATTGCCTTAATCGCAAGAAGAACGTGGAACGCTGCGCTGGTAA
CATCTTTCGATGTAACATGGCATGGACCAGGGGTTTAGGTACCCCCTAAG
AAAATAGGTACCCTCTGAATTTTAGGTACCCCCAAACAACAGACGTTAGT
AGGTACCCCNCACGTGAAGTTAATCGCAAAAAAGTTTTCCTGTGGGAGAA
GAGGGAATACTTTCTTCAATGAACTTTTCTCCTTAAATCTTAACAATCGC
AAAAAAGATTGTTTGGAATGATCAACAACAAAATTATTCCTATTATTGAG
CATGCTACATATTAGAGGCCCCTCAAGCGGTTGTTAAGCGATGTCGTGAT
GGGGAATTTTTTTCTGCGTGATTTCGCATAGACAGGGTTCAGACAGACCT
TCGAAAATAAAATCTCCTGAGTTTCCCTGAATTTTAATCAATTTTCAAAG
GTTTTTTCCCTGAGAAATTCCTCATTTTAGCTATTTTTTCCCTATTTTTT
CCCTGAGTATCAAGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGCAGACTGGGAAAAAAAAATTTTTTCCCTGGGTTTCCCT
GAGTTTCCCTGATTTTTCTGAAAATTTATCATATTTCCAGGTTTTCCAGG
GTCTGTCTGAACCCTGCATAGATTAAACTTATTCTTCACGAAGATTTAAA
ATCCCAAAATTGGCCAAAACCCCTAGAAAAATGAAAGAAAAAGAGGCCGA
TTCGCGAAATTTAATCCACACGAAAATATTTATGATTCCTAAATTGCGAA
AAAGTCGACACAGGGATTAATCCACTTGAGGTAGGAACAATTTTTCATCT
ACTGACTGGAATATTTCATTGATGAAAAATTGTTCTTAATGCAAAGAATA
TTGACCCCTTTTCAAGATTTCTGCGTCATAATTGTTTAGTGGTAAGGAAG
CGATCAGAAAAGAATTTGAGTGGTGGTTGATATCACTATGACAACTAATA
GAAAACACCAAGCCTTCACTGATGCCCAGTTGACCAAAGGAATTTTAGAT
TTACCCTACATAATAATCATTTCAAAATTTGTAACCACGGGTGCCTACTC
TGGCAATTAAGTCAGAGAGACCAAAGGAAGTTAACAAACAAAAAGAAGGC
TAAGGAAGTATTTAAGTTGAGGTTTTAAGCTTCTCTGGTTTTTCCTATAA
ATACTGAAAAATCTTTTAAAACAAGGCATCCAACATTCTAAATTGATAAA
AATCCAAAGAGATTCAGTCAATCAGATACCAAATCACAAAAATGAAGATT
TCCATCGCCGTCGTACTTATTGTTGGTAAGTTTCTCCTCGGTTTGATCAA
AGCCTCTTTAAGTTATCAAAATGAAGTTATTCTTGCCGAGATAAGCGAAA
CCTACTTCAATTGACCATATTCAAACCTAATTTCTACCTTCTTTTAGCAT
GTTACGCCAGAGAGCCATGTCCAAACTCACTCTGCAAATGGAGAGAAGAT
GGATTCTCCGCCCGAGTCAGTAATGATCATCCAGGATTTTTCTTCCAATG
TTCCAACTGGATCGCTTATTGTTTCGATTGCCCAGCCAACACAGTTTTCG
ATAACCACTTGAGAGTCTGCGTTCAACCAAAGAAGACATCCACAACCACC
ACCACCACTACCACAACTACGACCACCACGACACCACCACCACCAAAATG
TATGTTGTGAAATCGTTTTGTTTCCTTTATTTATACAATTTAACCTTGAC
CAATATACTTTCGAATGTCATTGCGTTCTTTTCCTCAACATTGTATAGCA
TTGAAAAATCAACTGAATAGAGGATAAGCTGTCATCAAGTTATTATGATG
TTTGTGGAATAAAACTCAAATAATATCCTAAATATTTCAGGTCCACAAAG
CTTATGCAACTGGCAACCCGTTGGAGCTTTAGTCAGCTACCCAGGAAAAC
CAACCTACTACGTTCAATGCGCCAACACTGGAGCTGTTTGCAGAAAGTGT
CCAGACGGTCTTGTCTTCAGAAATGGAATCGATGTTTGCGTCCGTCCTCC
AATCTCAAAACATGGCAAAAAACATTAAACGTCGACGATTTCGCCGAACT
CCCTCAACTCCTCTCTCTCTTGTCTCTTTGTAAATTTTGATATACATGTA
TATTATTTCTTTGTTAGTTTTTGTTTTTGATCAAATATATATTTCTGCAT
AAATAAAAG

Coding sequence (CDS) from alignment at sc0000041:311324..323382-

>TCONS_00004279 ID=TCONS_00004279|Name=TCONS_00004279|organism=Clytia hemisphaerica|type=CDS|length=2028bp|location=Sequence derived from alignment at sc0000041:311324..323382- (Clytia hemisphaerica)
GTCCACAAAGCTTATGCAACTGGCAACCCGTTGGAGCTTTAGTCAGCTAC
CCAGGAAAACCAACCTACTACGTTCAATGCGCCAACACTGGAGCTGTTTG
CAGAAAGTGTCCAGACGGTCTTGTCTTCAGAAATGGAATCGATGTTTGCG
TCCGTCCTCCAATCTCAAAACATGGCAAAAAACATTAACATGCTACGCCG
CAGAACCATGTCCAAACTCACTCTGCAAATGGAGAGAAGATGGATTTTCC
GCCCGAGTCAGTGATGATCATCCAGGATTTTTCTTCCAATGTTCCAACTG
GATCGCTTATTGTTTCGATTGCCCAGCCAACACAGTTTTCGATAACCACT
TGAGAGTTTGTGTCAACCGAAAGACCACTACCACTACCACTACAACTACT
ACCACCACTACCACCACCACACCCCCACCACCAAAATATCAACAAAATCA
AAATGAAGATTTTCATCGCCGCCGTTCTTATTGCTGATTGAAGAGCATCG
GATAAACGTCCACAAAGCTTATGCAACTGGCAACCCGTTGGAGCTTTAGT
CAGCTACCCAGGAAAACCAACCTACTACGTTCAATGCGCCAACACTGGAG
CTGTTTGCAGAAAGTGTCCAGACGGTCTTGTCTTCAGAAATGGAATCGAT
GTTTGCGTCCGTCCTCCAATCTCAAAACATGGCAAAAAACATTAACATGC
TACGCCGCAGAACCATGTCCAAACTCACTCTGCAAATGGAGAGAAGATGG
ATTTTCCGCCCGAGTCAGTGATGATCATCCAGGATTTTTCTTCCAATGTT
CCAACTGGATCGCTTATTGTTTCGATTGCCCAGCCAACACAGTTTTCGAT
AACCACTTGAGAGTTTGTGTCAACCGAAAGACCACTACCACTACCACTAC
AACTACTACCACCACTACCACCACCACACCCCCACCACCAAAATATCAAC
AAAATCAAAATGAAGATTTTCATCGCCGCCGTTCTTATTGCTGATTGAAG
AGCATCGGATAAACGTCCACAAAGCTTATGCAACTGGCAACCCGTTGGAG
CTTTAGTCAGCTACCCAGGAAAACCAACCTACTACGTTCAATGCGCCAAC
ACTGGAGCTGTTTGCAGAAAGTGTCCAGACGGTCTTGTCTTCAGAAATGG
AATCGATGTTTGCGTCCGTCCTCCAATCTCAAAACATGGCAAAAAACATT
AACATGCTACGCCGCAGAACCATGTCCAAACTCACTCTGCAAATGGAGAG
AAGATGGATTTTCCGCCCGAGTCAGTGATGATCATCCAGGATTTTTCTTC
CAATGTTCCAACTGGATCGCTTATTGTTTCGATTGCCCAGCCAACACAGT
TTTCGATAACCACTTGAGAGTTTGTGTCAACCGAAAGACCACTACCACTA
CCACTACAACTACTACCACCACTACCACCACCACACCCCCACCACCAAAA
TATCAACAAAATCAAAATGAAGATTTTCATCGCCGCCGTTCTTATTGCTG
ATTGAAGAGCATCGGATAAACGTCCACAAAGCTTATGCAACTGGCAACCC
GTTGGAGCTTTAGTCAGCTACCCAGGAAAACCAACCTACTACGTTCAATG
CGCCAACACTGGAGCTGTTTGCAGAAAGTGTCCAGACGGTCTTGTCTTCA
GAAATGGAATCGATGTTTGCGTCCGTCCTCCAATCTCAAAACATGGCAAA
AAACATTAACATGCTACGCCGCAGAACCATGTCCAAACTCACTCTGCAAA
TGGAGAGAAGATGGATTTTCCGCCCGAGTCAGTGATGATCATCCAGGATT
TTTCTTCCAATGTTCCAACTGGATCGCTTATTGTTTCGATTGCCCAGCCA
ACACAGTTTTCGATAACCACTTGAGAGTTTGTGTCAACCGAAAGACCACT
ACCACTACCACTACAACTACTACCACCACTACCACCACCACACCCCCACC
ACCAAAATATCAACAAAATCAAAATGAAGATTTTCATCGCCGCCGTTCTT
ATTGCTGATTGAAGAGCATCGGATAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002376XLOC_002376Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004279-exon-sc0000041-1575043694:323362..323382TCONS_00004279-exon-sc0000041-1575043694:323362..323382Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1575043694:319473..319521TCONS_00004279-exon-sc0000041-1575043694:319473..319521Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1575043694:319089..319337TCONS_00004279-exon-sc0000041-1575043694:319089..319337Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1575043694:311324..311642TCONS_00004279-exon-sc0000041-1575043694:311324..311642Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1510915933:323362..323382TCONS_00004279-exon-sc0000041-1510915933:323362..323382Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1510915933:319473..319521TCONS_00004279-exon-sc0000041-1510915933:319473..319521Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1510915933:319089..319337TCONS_00004279-exon-sc0000041-1510915933:319089..319337Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1510915933:311324..311642TCONS_00004279-exon-sc0000041-1510915933:311324..311642Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1491911889:323362..323382TCONS_00004279-exon-sc0000041-1491911889:323362..323382Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1491911889:319473..319521TCONS_00004279-exon-sc0000041-1491911889:319473..319521Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1491911889:319089..319337TCONS_00004279-exon-sc0000041-1491911889:319089..319337Clytia hemisphaericaexon
TCONS_00004279-exon-sc0000041-1491911889:311324..311642TCONS_00004279-exon-sc0000041-1491911889:311324..311642Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004279-proteinTCONS_00004279-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:311324..323382 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18426	1.4947	0	0.602968	0	0.262714	0.314843	0	0	0.149937	0.318769	0.139874	9.23419	3.51081	8.84031	16.1895	0.00415604	7.78687	2.30181	0.489804	0.277154	0.567983	0.313331	0.223109	0.768939	0.512097	0.432467	0.614906	0.231497	0.727412
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004279 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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