TCONS_00046127 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046127
Unique NameTCONS_00046127
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046127 ID=TCONS_00046127|Name=TCONS_00046127|organism=Clytia hemisphaerica|type=transcript|length=131bp
ATGTGGCTTGTGATTTGGGGCAATCACCTCTCTCATGTCAACAAAAGTGG
ATCATATAGATTTAAGGAGCTGCGCGTAAAGAATTATAATGGCAAATATT
TCACCACAACAGCACACACTGAAATTGCTGC
Run BLAST on NCBI

transcript from alignment at scaffold_105:811847..811977

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046127 ID=TCONS_00046127|Name=TCONS_00046127|organism=Clytia hemisphaerica|type=transcript|length=131bp|location=Sequence derived from alignment at scaffold_105:811847..811977 (Clytia hemisphaerica)
GCAGCAATTTCAGTGTGTGCTGTTGTGGTGAAATATTTGCCATTATAATT
CTTTACGCGCAGCTCCTTAAATCTATATGATCCACTTTTGTTGACATGAG
AGAGGTGATTGCCCCAAATCACAAGCCACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029471XLOC_029471Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046127-exon-scaffold_105-1491911889:811847..811977TCONS_00046127-exon-scaffold_105-1491911889:811847..811977Clytia hemisphaericaexon
TCONS_00046127-exon-scaffold_105-1510915933:811847..811977TCONS_00046127-exon-scaffold_105-1510915933:811847..811977Clytia hemisphaericaexon
TCONS_00046127-exon-scaffold_105-1575043694:811847..811977TCONS_00046127-exon-scaffold_105-1575043694:811847..811977Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:811847..811977 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046127 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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