TCONS_00046650 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046650
Unique NameTCONS_00046650
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length808

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046650 ID=TCONS_00046650|Name=TCONS_00046650|organism=Clytia hemisphaerica|type=transcript|length=808bp
CACCAGTAATGATGAAGGCACATTACGTCCTAAAAAACCACCATCTACCA
AGAAGAAGAATCAATCTCCCTTTAATTatttcaaacaatttcctGAGCTA
AAAGATATACCTTATTACCACCCAAAACTCACGAGATCTGGTTCAAAAAG
CAAGCTAAGAGATTCGGCAGATGGCTCTTATTTGTTAAGAGATTGTTTTA
CGTCCAAAGGAAATTTTGTTTTAAGTTATAAGTATGATGGCGAAGTTATA
GATTTGGTCATTTTAGTGATTGCCAAAAATACATATAAACTTTATAATCA
AAAGCCTGAACGACTGTTCAAGACGTTATCAAAAGCTGTGCAACAtttta
ttgagaaaaaatcgGAAAGTGATTTCCCAAAATTCCGTGGAAATCCCGTC
AGATATATCGAGTCTACTCCATTATCAAGTGCAGAAAGTTTACAATTTAT
CAATTATGCAGACCCGAATGACGAATTACAAAAAACGAgTAGCGTGATGG
GAAGTGAAAGAAACGATAGTTCTTACATGACAATGAGATCACCAGAACTG
AAAGGAAGCTATACGAGTAGTGTTTAAGCGAAAGTTCAAAAGTCCTTCAA
AACGCTCGAATTGGTCACAAAATAGTAATTGTAGGTTTTTCAAGgtcttt
taagaaaaatctatCTTACAACAAGACTTTTTGAGGCAATTTTCTACGGT
TAAAAATCACATAAACAGTTTATTCGATGCTTGTATCGATAAAATATTAC
GTATTCTTTGTATGACtgtatgtaaaaaaaaattatacaactGTACTTTA
TACCTGCT
Run BLAST on NCBI

transcript from alignment at scaffold_116:461288..479099+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046650 ID=TCONS_00046650|Name=TCONS_00046650|organism=Clytia hemisphaerica|type=transcript|length=17812bp|location=Sequence derived from alignment at scaffold_116:461288..479099+ (Clytia hemisphaerica)
CACCAGTAATGATGAAGGTGATATAACTTTCACTTTTCCCTTTGTATTAG ACTTGAACCCTTTCTcttagttttctttttttataatttcagcttttgaa aatttgtaccAATGTTTAACATTAAAGTGAAAAACTTTTACAAGTTGCTC TGGTGTGAAATTGTTTTTGTATACTTAgtgaccgtagcatgaaggtagag catccagctatggtgcgcaaggttgtgggttctatccccagccgggtcat accaaagattcccaaaatggcaCTTGATGCctttctgcttgatgctcagc aacttaagagacggatcaagggtaagtggagaacagggaaaggagtggtg cactcccctaccttcgggtagacagtcATCGTAAGAGAAGCCTTCGGGaa gcctccgactgcggtcgcagacttacttacttacttgtaTACTtaacaaa atcaaataaaaaaaaaatcccagCCAACCAGCATATTATGTACAACGTCA AAAAAAGCGTTGAtctaacgtccatataatgttcAGTGAAAACACTGTTG TGTCATCTGGGCGTTGAAATTATAATGATTTTTAGTTAAACCATATATGT TTAGCTAGCTAAAAACGTAGTTAATGAACATCAAGTAGAGAGGAATCAAG TATAGGTAGCATTTGTAGTTCTTTGATATCTCCCAGCTGGAGGTCGAACC CACAGCTTTGAGCACCGTAGCTGCATGGTCCACCTTCATGCCACGGTTGC TTCTAGCGACCTTTGGTTTGTTTTTGTGATCTCGCTTGGTCTCACTTTTG TTTAAGATTTTCAGCTTGAAAACACAGAGGTAAAAGCGACAAAAGCCGAG GGCAAAATTGGGGGGAGGGGGGCATTTGTCTCCATTATCCTGCATTTCAA TGCAGTTTTTCTAAACTAAACAAGACAAACCAAAACAGAATGACAACACA GTGAATTGGTCTATTAAATCGTTTATTGTTTACTAAAGATTATTCTTGTC AATATTTAATCCTTTAAACCTTTGGATTTTAAAGGCACATTACGTCCTAA AAAACCACCATCTACCAAGAAGAAGAATCAATCTCCCTTTAATTGTAAGC TGTTTTActtctttcaattctttttttggtgTTTGGCTTCTTGGGACAAG GATTAGGAACTAGGCCACCGTTAAGTTTCTGCACAATATCTTGCCCGTGT ATCCTAAGCCTTATTTACATTATACTGATGGTTGACAAAGCATTATCTGA CGCTATTAGTAATACCGATTAtggagccccccccccccagtggaccttca attcacgcaatcacgcaattttccccaaaattcataccctgagtatcaga ggttaagttttcaaagaatatattaacctctgaagaccaataatataaat tttatcgcgcatgtagtgtcaatctaatcacgtagaaagaatcaaagatg aagagcaaatattaccttattaatgtctagcagactgtgtcagtatgcag tttactatttaagaattccccagaaacccccaagtgtaatcgaagtgagt ttctttcgaaagaaatcttatACATGATCcccaatatatgattttgacct gtgcttttcacggtaccaaattcacgcattcacgcaatgttttttcgcaa ttcacgcaatttttgttcacgaaaagttttccaattcacgcattttCGTG Catttattcttttaattttcacgcattcaggcaagtgaaaaagcccattc acacattcacgcaaaccactgagggggggggggcataatACGTGTTAACA TCAAAGTGACTTTAGATGAAATTGGAAGAAATGTGGAATTGGAATTGaat ttacacttttttatttcttttatagatttcaaacaatttcctGAGCTAAA AGATATACCTTATTACCACCCAAAACTCACGAGATCTGGTTCAAAAAGCA AGCTAAGAGATTCGGCAGATGGCTCTTATTTGTTAAGAGATTGTTTTACG TCCAAAGGAAATTTTGTTTTAAGTTATAAGTATGTATAGTAGACTTTCTT TAACACGAATCTCTAAAATTCGAATGTCTCCTAAGCTCGAACAacttttc tcgtcccttcagttaacaataccgagtttatgtatgtgttttcagcgacg gagacggtaaggttctaatttggctaGATCATGACCAGCTgaagacgacg gtaaatcagcacttttaccgtcctcgattttgcgggttaGAAccgcgggt ttttccaaatcgcttcagtcactctaccgtcctccaaagtgcaaatacat aaactcgctaaacCAGAATATCCCTAACTCAAGCAAAATGTGTCCCTCGT GTGATTTTGAGTTATGGAAACTCAACTAGAATTATGTCACGATAGTGATT CTATAGAGGTTTTCCGTAATTTCTCCCATTTTAGAAGCAAACGTTTAAAT TTGTAGCGAttccttacgcaaatcgaatgtttgcttccataatggtggaa attacgtaacttaacaatAAGTGAAAAACATCTGTACCAGAGCCATTGAA TCAATCCAGCTTCCCTAATGGataatacagtagagtctccataactcgaa cacgcacggggcaCGCAAATTTGCTCAAGTAAAgggaatttcgagttatg gagtaaggcttAGAAGGTATTGTGAACCGAAAGGACCattaaacttgttc gagttaaggtgacattcgagttatagaggttcgagttaaaaagaaTGCAC TGTAATATTAAAGTACTTTGGAGACTATGATCATCAATGTTATGTAAAAA TACATCCCTTTCTCACAGCCCTggtgagatttttttcttttgtggggata aaaattgctATTGAAATTCCGATGGGGATAGTAATTCTATTGTCCAAAGG ATAAAGAAACAGTGGGGttgtggttttggagtgcaattttttaacattga atttcgattggggatgaaatcaaagtcaatgtCCCAGTGGTGCTGAAATT tcaaggtattttcccaccggaaacgaaatttttgccaaattttccagtgt ggCTAGGATCCCAGCGGGACTGTGACACAGGGTTGTAAAAATGGGCAACT TTGAATTTTGATATCGGATCAAGAATACCGAGGAAATCTAAaagcaaatt ttcattttctttctttccatttttcagGTATGATGGCGAAGTTATAGATT TGGTCATTTTAGTGATTGCCAAAAATACATATAAACTTTATAATCAAAAG GTTTGTCATGAAATTCATATCATTATTATCATTAAGGACTTGCCATATAG TGTGAACACGAGAGTACacgatttttggacctaccgggaggtcctttaat ttgaccgttgtctgttcgtctgttacaagcttttctcgggattggctcat tagttttttttaattttttgcacaatgatacaaaatggcaaagcctgaaa agtgacggagcccgatttttgaaaaaaaaattttggggggcaaatttggg ccaaaaactacctaaaaataaggttttttggactttgtgcaaagttgctt cattagtttttcctgatttttggcagaaaaatagagtgcaaggtacccta aaatgtggctgaagtaatttttctcggaaaattttttttcgtcgtcaaat acggattttcgcaaatttgggccaaaaactacctaaaaataaggtttttt ggacttggtgcaaaattgcttcattagtttttcctgatttttggcagaaa gatagagtgcaaggtaccctaaaatgtgactgaagtaatttttctcagaa aattttttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaac tacctaaaaataaggttttttggacttggtgcaaaattgcttcattagtt tttcctgatttttggcagaaagatagagtgcaaggtaccctaaaatgtga ctgaagtaatttttctcagaaaattttttttcgtcgtcaattacggattt tcgcttttttggggaaattcccttttaccattttcctgttagcagctttt ctcgggattggctcattagttgtttttaattttttgtataatgatacaaa atagcaattcctgaaaagtgacggagcccgatttttgaaaaaaaattttg gggggcaaatttgggccaaaaactacctaaaaataaggttttttggactt ggtgcaaaattgcttcattagtttttcctgatttttggcagaaagataga gtgcaaggcaccctaaaatgtggctgaagtaatttttctcggaaaatttt ttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactaccta aaaataaggttttttggacttggtgcaaaattgcttcattagtttttcct gatttttggcagaaagatagagtgcaaggtaccctaaaatgtggctgaag taatttttctcggaaaatttttttcgtcgtaaaatacggattttcgtttt tttggggaaactcccttttaccattttcctgttagcagcttttctcggga ttggctcattagtcttttttaattttttgcacaatgatacaaaatagcaa tgtctgaaaagtgacggagcccgatttttgaaaaaaaaattttgagggca aatttgggccaaaaactccctaaaaaaaaggttttttggactttgtgcaa aattgcttcattagtttttcctgatttNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttttc tataagcataacgtttatgagcatatgcaggctcagtttttggtacccaa acaatggctctattgtttaaaaaacaatagaatactAAGCATAATTCGAG CCTGAggtagacacttgcttataaaaaaagatttttgacatGGACTCAGT AAAACTTTCCATCCATGAAGATATAGCTTATTTTATTTTAGCCTGAACGA CTGTTCAAGACGTTATCAAAAGCTGTGCAACAttttattgagaaaaaatc gGAAAGTGATTTCCCAAAATTCCGTGGAAATCCCGTCAGATGTAAGTATC TACGAGAGTTTTTTCAACAAACTTATTATCCTTTTTCTGAAACTGAAACT CAACTGAGCTGAGCGCACCCCTGAAATAGTTTTTGCTAAAAAGAATGCAA ATCGGTTTCCGCTTAAGGTATGGAGCCACTAGAAACAAATTCCCTTataa tcccagctggcacacaacgttgttttaacgtttaaatgacgttatttgga cgttatgaatgtcacatggacgttgctttgacgttgtgtgccagctggga tgaaACATAAACAAGCCGCAATCCAATTGCTAGTCTTTGTTCCAAGTGGC CCACTCGCCTCAGAGAAATTCATGTTTTCTTTCTGTTGATCGAGGTGTTG CCactagcaactttttcatcaaaacaaagtgaaattttttgcatattcag ttttcaaatgtttctatttgatgatgaaaaatgtttccaGTAGCCTTTAA GACCTTTAtagcaaaatttaatttcaaccttgttttgttttcaaccaaAG TTTATGACTTAAAGTAGACTCTCGGTTATTCGAAGCTCCAAGGGGGATAA GAATTTaattcgaataaccgggagttggaataactgaaaaattcgttttc cCACCAGATTCTCAACTTATTAACCTTAATTGGAGGGACTTTTCTGAAGT AATGAGGCATTGCAGTTCAGTTGAGCGtaataaacacaaagaaattgcTT GAATAGCGATANtcagaaagatagagtgcaaggtactttaaaatgtgttt gaagtaatttttctcagaaatttttttcgtcataaaattttcaaaaaaag acgaccaagttacacaatgataaaagaaaataaatcagacgtttttgcat tgttctaaaACTTATCGNTATTgtgtttgctcaataccaatagtaaaatg tagaatacctacttttatctgattttgatcaacaggtaggtccattcagc atgttgcttgtttttataagaacatccaaaatgtcTGAAACCTTCGggtt ttcttaactttttgagttttaagcctaaaaatattcttaacatgttctta ttttcgccattttttgggtatttttgtccattttgttCTGAACATTTTGG CCGTCAaatccttatgttcttatatagtttgttctccataaaaaacatgt agcgcAAAAATCTCAATTTAGTAGTGAACCATTAAACTGATGACTGGAGT GGGATTGGAACTCGCGACTTTTGAATCACTATCACAACTGCTATACTGAA TGACGTATccacaatcaaggtcataatatttgagaaaaaagggaaattcc cttcgaaatcttatagccataaacgatttggaagcgttCTACGTTAGGtt agaagggtagagttttaacaactgctacatgtttttttctataagcataa cgtttatgagcatatgcaggctcagtttttggtacccaaacaatggctct attgtttaaaaaacaatagaatactAAGCATAATTCGAGCCTgaggcaga cacttgcttatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNaggaaaaaaattatttcaatcgCAGAAAATTAATGTTCTCACTTGAC AATCTCCCAATAAGAAAAATTCGAACAACTGAGAGTGATTTAGCCTATAA TGTACCCCAAGGGGAATAGAAATCGTTTCGTATAACTAAAAGCTCGAATA ACTGAAGTTCGAATAACCGAGAGTGTTTTTACCAGGGTCGAGTAAGCGGA TCCAAGGGGAACGCCATCTCACTTCGAATAACCGAATTATTGGAATAAGT GCAGGTTtgaataaccgggagtctactgtaTTGTGTACAATGATACTCTT TCAATGAAATTCAGTGACATCAATGATTCTCTTCTTAAAGAAACTTTCTT ACCAAGAAatttgtaaatcaaaacaaatgtcacatgtcaaaataaaaaac caaaacaaatatggctgattttgattgtttcaattgttttacaagtttgt tttggacacgtgactttaattgttctctttaatgacacgtggttcgcgca atgtttacattttactacttttatgtccctttaaaaagtAGCAGTGATTA ACTTATCAGTGTTGcaaattttcttgaattttctaACCTGGATTTCCGTC CAAATAATCAGCGCCGTAAAATTTGGCACTaaagggaaattccctcaaaa ctgATCAAGACTGCAAATGATTTAtcaagtgctttaaagtacggttagaa agtagagttttaacattagacttgagACTTTAGACGACCTTAGAATCTCA taatttaaaagctcaaaaattttccaacatgGCTGAGAaaatagcctgga agccacttaacacATCCCAAATCGAGAAATCCACTggaacaaagtggaag tactgaaattaCAACTCTCACCCGAGctttaaattttagaaaacgttaaa atacccaaaattgccaatatatttcggcactGATAGTATTAAAGCAAAAT TTTCGTGAACATGGAATCAGATTTTAGACTTTCCGTCCAGATTAAGCAAG TATTCAACAGCCTTGAAATCAACACTccaaaaattaacacgaattttatt tgctttttcaaggacaccacggctggttttaattaaggggttttttatta acacgaaatttttcaattcatgtTTTAataaatgactagtaatattcgtg taataaggtattcaatgaattgaaaaatctccagtCTTTAATGACCCTTC GATGGAAAGCCATAAATATATTGgacattaaaatcatttttactaTAATT ATAGATATCGAGTCTACTCCATTATCAAGTGCAGAAAGTTTACAATTTAT CAATTATGCAGACCCGAATGACGAATTACAAAAAACGAGTAAGTTACACT AAACATACATAGGCAAACTCACTGAGACTCAGTGATGCCGAATATAAGAA TACTTTAAGAACACTCCTCTGAGCCTAGATAGTAGCCTTGATTGGTGTAA TTATCGTGGAAATTCGGAACAAAGCACCAAATTTGGACCAGACATGCCTA ATACACTATGGATTGATATTAGAAGGGCGACACAGAAAAACTTTAAGGGT CCCCCTTATTTTTGGACTCATTTATTGAAAACCTAGGCTAAAGCCCAAAG GcctaattttttatgaaaaaatctttcgcgAGTTCTCTGGGTTTTTTTCA TCCAAGATTTTCCAGATGAGTTGGATAGGAATTTTTATAAGATAAttgat aattggtcatttaaagtaataaaaatgacgtgctctttagaaaaagttgg ttaacgaccaaccaaatcaattAAGAGTTTGCTATTTTTTCTGATACAGA GGCCCCAAACTGattaaatacaccttttcgaccgtagtcgcgcggtcagg tgcgtgccactttattatttaatttactaCCCTAAACTCNatacaccttt tcgaccgtaatcgcgcggtcaggtgcgtgcgactttattatttaatttac taCCCTAAACTCGGTCCAATCCTTTAtttacacatttttctattgtgttt aggtgtgaaaaaatggacaaactagtgtatatgtataagaattgcgaagc gatccaggcaagtcactcgattcgcaagttgcaagcaaaatatttatagg gtcactCACAAATTGCAAGTTAAAATAGACTCATAATTAATTCTTAAATG TAAACCCCGCGAAACCCCGACAACTGCTCAGGTTCAGGAAGACCGAGCCT CTTTAGAGGCTCAAACACTTCAGGTGTACAAACTTACGACGTTTACTTCT acggatttgaggaaaattatatgaTTTCTTTCATGAATCGTTGTGAAAAG TTCAATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTAAAATCctgagataaaaataaaga aaaaccagataaaaaaaactgacatATAGAAATtattcttcaacgattct actaagtaaaacctctaaattttacttgctgtgatttttttcaaagttgg gaaacTCTTAGCTTAAGTTTGCTGTGGAGGCAAGTACAGTATATATACTT TTACCCTCTTACtcgagttgttgacaaacaggagcaaactcttcacataa aaagtaaaaaatctgtgacttttttctcggctgtagcacaggaatttaaa acagttaaaatgcatccataaacataatgtcatgttttgtcgttgtattt cgacattttacaagtcattaccattaattaacattaccaacaataaaatc ttttaatacaatcacatgtcaatgttctatttctctGACCATCGATGCGT ATTCCCagtattcataaacaacaaacaacaaccaaaGATCCCACATCATC GAGGGTCGGTCAAGCCAAAATGTCATAAACaacgacaaacaaacatttct ccttccactgaataaggggagggataaattcttccaggttagccatatcc aaaagcgcaaaatatttttttccccaTCAATTCAAAATATACAATAAGTC CAACACTTCAACATACTACCAAGATTCAATCTAAACCAAAAGCCAAAATG AATGGCTTTCCCACCATATGTATACAGTTCATTTCTTCAGCTTTTAGATC CTCTTCTTGCAATGAAGCAACAACTCTGTTGAGCCTTGCCTGTCGATGAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagcccgcgctgattttcc gacctcttctttagatttcctaatttaaaccttaAGGAGATAAAAACAAG GCTTATCTAGTACCGGTAACCGCGTGTATTATATCTccgtagcttttaag aattgatatatctaaacgcacgaggcgacactttttgaaaaaaacgaatt taaccatccgtaattccagGTCTCTCCGCCGCGATTCTAGGTTTGATCTA AGGAAGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGGGCGGACGGCTTTCTCAA TCATTTCTgcgtttgaaagattggatatatatagtgatttttcatttgcg ctccccagcgtaggtgagatttaaaggtacttatacacgatagcaaaact gcttcgctcatgtatattcgcttcgcaaaacaagccgtatatatataaaa gttgcgaagcgatccagagcctcctcgattcgcaagttgcaagcaagaaa TTTAAGACATACAAACACTGTATATTCAATGGCATTTGTGAAGTTTTACT TAATACATTCGCTGCAGTCTTTCCGAATAGTCTGATAGTACGacaagttg cgaagcgatccagagcctcctcgattcgcaagttgcaagcaagaaaTTTA AGACATACAAACACTGTATATTCAATGGCATTTGTGAAGTTTTACTTAAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NGAgtttaaaggtacgcacacactatagcaaaactgcttcgctcatgtat attcgcttcgcaaataGCCGCATgacaattggcggctacggtcgaaaagg tgtattccttTAAAGAAAACTTCATGACAAAAGgcagattttagaaaaaa gcttttttctcGCGAATAAGGTTTTCAGAAAAGCCAATTGTTTCGCCACA cgtaccgtcagttggtaagcCCACTGTCCCCCGGATCAAATCATGGAAAG TATTTGCTATATATTAATCAAAActcttttcattttgaataggTAGCGTG ATGGGAAGTGAAAGAAACGATAGTTCTTACATGACAATGAGATCACCAGA ACTGAAAGGAAGCTATACGAGTAGTGTTTAAGCGAAAGTTCAAAAGTCCT TCAAAACGCTCGAATTGGTCACAAAATAGTAATTGTAGGTTTTTCAAGgt cttttaagaaaaatctatCTTACAACAAGACTTTTTGAGGCAATTTTCTA CGGTTAAAAATCACATAAACAGTTTATTCGATGCTTGTATCGATAAAATA TTACGTATTCTTTGTATGACtgtatgtaaaaaaaaattatacaactGTAC TTTATACCTGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029777XLOC_029777Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046650-exon-scaffold_116-1491911889:461288..461304TCONS_00046650-exon-scaffold_116-1491911889:461288..461304Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1510915933:461288..461304TCONS_00046650-exon-scaffold_116-1510915933:461288..461304Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1575043694:461288..461304TCONS_00046650-exon-scaffold_116-1575043694:461288..461304Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1491911889:462322..462381TCONS_00046650-exon-scaffold_116-1491911889:462322..462381Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1510915933:462322..462381TCONS_00046650-exon-scaffold_116-1510915933:462322..462381Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1575043694:462322..462381TCONS_00046650-exon-scaffold_116-1575043694:462322..462381Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1491911889:463163..463316TCONS_00046650-exon-scaffold_116-1491911889:463163..463316Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1510915933:463163..463316TCONS_00046650-exon-scaffold_116-1510915933:463163..463316Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1575043694:463163..463316TCONS_00046650-exon-scaffold_116-1575043694:463163..463316Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1491911889:464465..464537TCONS_00046650-exon-scaffold_116-1491911889:464465..464537Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1510915933:464465..464537TCONS_00046650-exon-scaffold_116-1510915933:464465..464537Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1575043694:464465..464537TCONS_00046650-exon-scaffold_116-1575043694:464465..464537Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1491911889:466429..466528TCONS_00046650-exon-scaffold_116-1491911889:466429..466528Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1510915933:466429..466528TCONS_00046650-exon-scaffold_116-1510915933:466429..466528Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1575043694:466429..466528TCONS_00046650-exon-scaffold_116-1575043694:466429..466528Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1491911889:472042..472125TCONS_00046650-exon-scaffold_116-1491911889:472042..472125Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1510915933:472042..472125TCONS_00046650-exon-scaffold_116-1510915933:472042..472125Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1575043694:472042..472125TCONS_00046650-exon-scaffold_116-1575043694:472042..472125Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1491911889:478780..479099TCONS_00046650-exon-scaffold_116-1491911889:478780..479099Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1510915933:478780..479099TCONS_00046650-exon-scaffold_116-1510915933:478780..479099Clytia hemisphaericaexon
TCONS_00046650-exon-scaffold_116-1575043694:478780..479099TCONS_00046650-exon-scaffold_116-1575043694:478780..479099Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:461288..479099 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.658604 0.104833 0.21582 0 0.0403027 0 0 0 0 0 0 0.13969 2.0165 2.98257 0 0 0.522965 0 0.00723123 7.62663e-09 2.00892 1.78235 0.472505 0.718611 3.8723 4.49321 0.420029 1.7657 0.215214 0.0908771
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046650 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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