TCONS_00046974 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046974
Unique NameTCONS_00046974
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length808

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046974 ID=TCONS_00046974|Name=TCONS_00046974|organism=Clytia hemisphaerica|type=transcript|length=808bp
gtcagaaacaatatCCATAGACCTGGGAAGATCCAAATTGTTGGTTCGCA
TGGAATTTATACAGAATGGTCAGGATATTGTCGGCGTCGAAATTCATGAT
GTTAAGATAAAACAGGAAGAAGAGGAAGGAGAGGGAGACATAGAAGTCGA
TTTTGTAGTCGAAGAACAGGCGGAAGAAGAGGCGGTAGTAGAAGTAGAAG
AAGCGTTAGCTCTTCCCGCGCCAACACCACAaccatcaccatcaccatca
cCTGCTCCTCTCTCCAAACGAGGCCGCCCAAGACTAGAATATGGAGCGAG
GAGAAGGATCGGTCAAGGAAAGGGTCATCATATCGGTAAACGTACAAAAC
GCCACAAAAAGTCGGCCGATGATGACTGCTTACCCTTGACCGaggaaaga
ataaaagaaatgaAAGTGGTGGTATTGTGGGAAGAGCTAAGACGAAGAAA
TCTATCGTGCAAAGGGGTGAAAGCGGTGCTGGCGGAAAGGTTGTTACACC
ACTGGAGAGAGCACGAGGAAGAACAAGAGGAAAGgaagaagagaagaaaa
aatgatGACGATGATATTGGTGGCCCCGGGCCCAGTGGTATGTCCGttta
gtttattttttgttattttttgcttgatatttttttatttttaattttta
aacttttatatttgacatACCCTGGGTTACTTCTCTTCTTTCTTCGCCTT
TGTTCTTTCTCGTTAATCTCCGAAAAAAATGCCAATAGTTTTAataactt
ttcaaatataaacctTTCAAATCCTGTTCGGCCGCTTCTTTTTTCGCTTT
GCTTCGCT
Run BLAST on NCBI

protein sequence of TCONS_00046974-protein

>TCONS_00046974-protein ID=TCONS_00046974-protein|Name=TCONS_00046974-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
SETISIDLGRSKLLVRMEFIQNGQDIVGVEIHDVKIKQEEEEGEGDIEVD
FVVEEQAEEEAVVEVEEALALPAPTPQPSPSPSPAPLSKRGRPRLEYGAR
RRIGQGKGHHIGKRTKRHKKSADDDCLPLTEERIKEMKVVVLWEELRRRN
LSCKGVKAVLAERLLHHWREHEEEQEERKKRRKNDDDDIGGPGPSGMSV
Run BLAST on NCBI

transcript from alignment at scaffold_119:10922..19132-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046974 ID=TCONS_00046974|Name=TCONS_00046974|organism=Clytia hemisphaerica|type=transcript|length=8211bp|location=Sequence derived from alignment at scaffold_119:10922..19132- (Clytia hemisphaerica)
GTCAGAAACAATATCCATAGACCTGGGAAGATCCAAATTGTTGGTTCGCA
TGGAATTTATACAGGTATGACTTTTTATCTTGTGATCGATATTCAAATTA
CAAAATTAAAGAAATTCTCATTTTCTTTCTACATTAATTCATATTATTAT
ATAGGTATATAGGTCGTAGAACTAGCGTATCTATTAGTTTTTTAAAAAAG
GTTTTATGTGTTCCCCTTTCTTCGGACACATGTTTCATATCAGGACAGTG
TCTGCCTATTGTTATATTATGCTGATATAAGCAAAAAAGGTTTTTCTTTT
CCTCTTTCTAACCAAGTTTGCTCCACATCCGTGTCTATTTTTAAACGTGA
AAAGGCTTGCGCATCAAAACTGAGGAGTAAGCAAAAAATATTTCTCTTAT
TTAAAAACGAAAAGAAAAGATCGAAGCAACTTAGACAGGGACACTTCAAA
ACAGAATCATTGAAACTTAATACTCTCGTTGCAACGTTGTTTCAACGTTT
ATCTAACGTTATATGGAGGTTATGAACACTAGATAAACGTCGAAACAACG
TTTTGTGCCAGATGGGTGAATACTCTCGCTGCAACGAGAAAACTTGATCA
ACTGTTTGCTACTGCGAAAAGACAAACGACTATCTTGAACACTTGGACAA
CTTCTTCTATGTGTCCCCCCTGACAATATTTTAAAACATTTCAAACATTA
TTTTAACCCGGAAAAGGAAAACACTGTCAGACCAGACGAATTGGACAATC
TACCTAGTCGCTTCGTAAGATTTCTTAAATAATGGACATCAATATTGAAC
CTTCTACCATCGATGAGATCGCAAAATATTTACAAAAACTCAAAAACAAG
AAAGCAAATAATGATAATTTGACTCTGAGCTCCTAAAGAAATGTGAGTGC
CTAGCTCTTCTTGACGCTATTCACAAAATGACACTATATGTATGGAAAAA
TCTCGGCATTCCCTCTGTATGGGGAAACTCCAGATTGAAGACTTTATGGA
AAGACAAAGACTCTAAGAAAGATCCTACCAAGTACAGAGGCTTGAGTATC
GGCTCAACAATAAGCAAACTAATTGTGAACAATATCCTAAGCAGACTCCA
GGCACAACTGACGAGGCACAACTGTCCGATGAGCAGAACGGATTAAATGG
GTGTTCGACTCAATCAGACTTCGATTTAAGGATACCCAAAATCCTATCTT
GATTGACATTCTTAAAAAAGTATCCGAAAGAACTTCCTTGACTTTGATGA
AACTACATTTGATACAACGAGCGGTGTTCCACAAGGTTGACCAGAATTCA
GAGTCAAAATTCTACTTTCCAACGGTAGTTTAACGCGTTTAAAATTTATT
TGTGCTGTTTTAAATTTTGCAGGGAAATCCCCTTTGTTTCAAATATTTTG
TCCATGATTGTAGTAAATCCACCACTTGAGTTTCGGAAAAAAATATTTAT
CCCCACTGGCATTTACAAAGGCACCGTGTCTGTGAGAACGGGGTGTACAA
ACAAAACCCTCAACCTCTAGTTTTGATTTTTGGACCTACCCCGGGGGCGC
AAAATGGTGGTGGCCAAAATGTGACGGAGGCCGATTTTCAAAAAAAAATT
TTTTGGCAAATTTCAGTCAAAAAACGGCTTACAATTAAAGATTTTTGAAA
CTAAAATTGTGAAACATTGGATCATAAATTCTTTCTGATTTTTTGCATGA
AAGTAGGGTAAAAGATGGCTGAAGCAAATTTTCGCAAAAATATTTTTTCG
GCTCAGAAAACGAATCTTCATCTATAAGATTCACTATAAGCATATATCAA
TGTTCTCAGCCAAATTATTATTTTTATTACAGTGGAAGGTCTCTTATTCG
ACGTTACACTATTCGATAAGCTCCCGTTTTCGATCAAATTGAAAGTCACC
GTCAAATCTCCTTAAGAAACTCTCATAAACTACGCTCTACTATTCGACAT
TCTATTATTCGATAAGCTCCCGTTTTCGATGAAAATTTGAAGTTCCTTGA
AGGTTTTTCGCTCTCTTATTCGATTTCTACAATACTTCAAGAAATATTTG
AGATAAATCGGAAATTCCCCAGGAAGTTTTGAAACCACAATCGATTTGTA
AGTGCTCTAAAGTAGGTTCGAAGGGTAGAGTTTTAACTCTGAGTTTTAAC
GCTAGACTTAAGACTTGGATCTGAGGATCCAAAAGTTCAAAAGTGGTCCA
GTAAGGCTCCGAATATAGCCTGGAAGTCTGCCTACCCGTCTCAAATTCAA
ATATTCGATTAAATTAAAGAGATAGCTCAAAATCGGCTTTTTCGCCCGAA
CTTTAAAACTCAAAAACGTCAAAATAACCGGAATTCTCAATATATTTCTT
GAAAGATTGTAGCGTGTAAAAAGGCCTTTAGGACGGAGTTCGAAATTCAA
ATTTTCGATTTTTTTGCGTTTGAATTATAATTTCGAAATTCGATTCCTCA
AAACTCTTCAAAACAGGCAAATATCGAAAGTTTTCTTCCGAAGAACTTAG
GTTTTAAGCAAAAACTTAGACATTTGTCCTGATTCACGTTCAAACCATTC
GAGTCTCGGTTATATTTTTCTTTCTCAGCTTCGATATTTACCTCGTGTTT
ATCGGATTAGGGAGACTTCCTACTATTCGATACGCTCCCGTATTCGATAA
AAATCAGATTCCCCTTGAAAATCGAATTAGAGAGCGTCAATTATTTTTTC
TAAAAGAAGAAAATGTCACGGTAGAGCGCGATGGTTTGAGTCTTGCTAGA
AACTTCATTTATTATTCATTTATTATTCTGTGCATTTTTCTGATAGTGGA
TTGTTCTTACAAACAAAATTAATAAAATTCAATAGTGTTGATAGTTTCTC
CAGATAGATATGCTGTCATTATATTTTTTGTATTTTGACCAGGTGTCTTA
TGTTTATCATTATTTCAATGTTTATTGATTAAGTTTTGATAACCAGGTAG
GTCCATAAAAGTATCACTTGTTCTTTTAAATTTTTTGATTTGTAAATATT
GTGCACAAGGACGTACAAGCATGAAACTTTTCACAATGGTAGTTTAGAGG
TCAAAAATGGATTTACATCTTAGACCCAAAAAATGGGCACCTGTTTGTGT
ATTTTACAGACCAGAACAGGTTTCCAGGATAAAATGAAAATTTTTTTTTT
CTCCAAAGTATGACATGCTAAATACCGTTGGAAAGCATTTTTCATGCTGA
TTCGGAAAAACATCACAACCCATATCTGAAAATGAAGCCAATAAAAGTTA
TAGGGGGAGGTTATTCGAAAAATGACGTAATTGCTGACGTCAGCAAAAAT
TCCAAGACCACCCAAACAAATAATTTTTGTGAAATTCAATATAAGGATTG
TTAATAATAGATAAGGGTTGTGATGTTTTTCTGAATAAGTATGAAAAATG
CTTTCCAACGGTATGTAACATGTCATACTTTGGAGAAAACAATTTTCATT
TTATCCTGGAAACCTGTTCTGGTCTGTAAAATAAATACACAAACAGGTGC
CAATTTTTGGGGTCTGAAATTTAAATCCATTTTTGACCTCTAAACTACCA
TTGTCCAAAGTTTCATGTTTGTACGTCCTTGTGCACAATTTTTATGGCAT
TTAGCACAGGGACACTATTGCTTTTAAAAGCAAGCATGTACCCGATTCGC
CTATTTTAGTAAAGATAGGAAGTTTTCCCCATTGTTTGTTGTAATGTATC
TGTTTTATTTAGAATGTGTATAAACTTTTCAATCAAACTCCAATTTTTTT
ATCTGCAGATTTTTCTCATTATTTTATAGAATGGTCAGGATATTGTCGGC
GTCGAAATTGTAAGTTAATTTGATATACGCTATAAAATTGGTCTCTTTGA
AGTCGCATTCCGAGATTTGATGAATTAAATGTTGAAAGCTCGGGGTGAAG
TCAAGTTTTTTAGACTTAGACCTGAGTAACATCAATGTACGTCTTAATGA
GAGCCTTTTTGATAAATGGGATGGGATAGCTTTTCATAGTAGTTACACCT
TCCTATTTGTTTCAGTAACATGCCCTCTGGGATATTCTATTCTTGTTTGG
GAGCCGAAATATTGGAAGAGAAAGCTCAAACTTTTTGGACCTACCTCCGG
GTACCCCGGTGGAGATCCCTTTAATTAACCCATGTTCGTCCGTCCGTCCG
TCCGTCCGTTCGTCTGTTTACCAGCTTTTCTCGGCTCATTACTTTTTTCT
GTTTTTTTTGGCACAATGATGCAAAATGATGATTCCTAAAAAGTGACGGA
GCCCGATTTTCGAAAAAAAAACTTCTTTTTTTTTTGCATTTTCTCGAGAT
TTTATCACCGGAAATATGCCGGAAATCGTCATTTTTCTGGATTTCCATTG
GATTTTTTAGGGTTAAGGTTAGGATTTTTTCCTTATAATTGGTTGTTTTT
CATTCAAAAACATTAACCCTTTAACTGCCGATGTCGGCATATGCCGACAT
GAGCATTTTCGATTTCTTTGCCGATGTCGGGATTTGCCAACATGGGCACA
TTCCATTTCTTTGCCGCAAAATTTAACACATCTACACAAAGATTTTGTAT
TAGATGGTTGAAATGAAAAAAGAAAAGCTTTTCTATGTTGAAAAATAACT
ATTCAACAATGTTCAACTCAAAATCATAGTCCTTGGCTGATACTTCATAT
ATTATTCAGAAAATGAAGTCAAAATCGCTACCTTTTGCCCATGTCGGCAT
ATGCCGACATCTGGCAAATAGGTCGAACCTTCTTTTTTTCCCGTGGCAAA
TAGGTCGAACCTTAAAAAATACGAACGGCAGTTAAAGGGTTAATACAATA
GCAATAGGTTCGGCTTGGAAACATTTGCCCAAAAATACGAAATCTCTTAA
AACACTGAAAGAATTTGCTTCTGAAATCGTGGGAGTCAAAATTTACTGTT
CATGCAAACTCTGTACTGTATTTAAATTTTTTTACTCTAATTATACACTA
TGTTGTGTTTTTATCTATCTTGTTGGCATAAATTAGTATTTATAACTGCT
TGTTTTCTTCAAACATAGTTCTATTAAAATGTTCATTTAGGCAAGAAGCA
AAGATTGAACGCTCGGAAAAACTTTAAAACATATGAATCGACTTCAGCAG
GTTTTTCGTTCCCTGGCCGAAAATGTCATAATGTCCACTTAAGGGCTCTG
ACAATAGTGAATTTCGATATTTGTTATGTACAAAATATAAATTTCTGCCC
GATGTAGCTAACTAAACTGTGGCATGTTATACATTTTCTGTTAGGCCAAT
TGTCCTTGAGTCTGAAAATTCAGAAATCGCATAGAAAAAATTTGATGAGG
AAGAAAATGAAGACTTTTGCGACGAAGAGTATTTCAACTTTGAAGAGCTT
TAGTTTGGTCAAAGAAGAAATATTTTGAAAAAGCTTTTGTGGTAGATGAT
GTATCTTTTACGGAACTAAAAACATATTTTCGGAAATTTTTTTTAAAAGC
TTACTTGTCTCAAAAAAGTGCTTTTTGACCAATTTTTCATCCCAATACAC
TCTTCTCGAGATGCATAAATTTATTGTTGAACTCGTTTTCAAACATATAT
CATTGCTATGAAATTATACATTTAAACCAATTTAAATTCCCAAAAAGCAA
ACATTAACTCTAAAACAAAAGTACTTGAAATTCAAAATGTCTCATGAGGT
GTAAACAACACAATTATCATTGTGAATATGTAATTTTATAGCAATGAAAT
CTGTTTGAAAACGAGGACAACAATAAATTTATGCACCTCGAGAAGAGTGT
ATTGTTCACGGAAAAGCAGCCATAACTTTTGATGCATCAATTTAGAAAAT
TTTTCCGACAAATTTAGACAGTTCAATTCTTTGCGGACAGTTTGAAAAAA
ATTCGAAACAAAAAGATTATTTTCCAATTACCAATTAAAACTTTTTATAA
AATAAGGTGATGCAACATATTATTAACGTCTTTTTAAAGTTCATAACGTC
ATTTTTGTGATTGAATTCTTGATTATTTTTGATTTGATCAAAAAGCAATT
TGTAAAGGCAATTCTTTGTTAAAAATGTAAAGGAACTTCTTTGTTAAAAA
TGTAAAGGAACCTGAAACATAACTATGCTTAAATACCAAAATGAATTTTT
TGACTATGGTCAAAGCCCCTAATTAAATTTCCTACACGAGAAAATATAAC
ACAGATTAGCCCTTAAATTGACCTATGTTTGTCCGTTCGTTCGTTCGTTC
GTTTGCTTTTCTCGGGATTGGCTCATTTAGTTTTTTCCAATTTTTTGCAC
AGTGATGAAAAATGGTAATTTCCATAAAGTGATGGAGCCTGATTTATGCC
GGTTTTGGCATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTG
CACAAAGATGCGTATTAGCAATCATAGTGTGCAGAGGGGTCTGAACCCCC
CATTAATATTTCACCCCCCCTATAAAGGTATCCCCCCTATTCTTAAAATT
TTTTGATCCCGCACCATTTACAGGGGTCCGAGCCCTCAGCATATAATTTG
TACTCCCAGTATTGGGGAAGAATTTTGGTGAATGAAATATATTTTTCAGT
GTGAATTCGTACCAATAGTCAATGATGATATTAAATTTTATTGACTTAAA
TCAACATATAACATAAAAAAAAAGGTTTTTAACCAAAAAGTTACTATCCC
CCCCATTTTTATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCCCCCCCCCCCCTATAAGCTCAAGCCCCCCATTTTA
ACTGGAAAATTGCCCATCCCCCTATAAAGCCTTCCTTGAAAACTCGGACC
ATACTATGCCAATGCCCAAAATGTGGCTGAGTCGGATTTTTAAGAAAAAA
AATTTTCCAGCCGGAAATAAAATGCCGGAAATCGAAGTCTTTGCAGATTT
TCATTAGAAGAATTTCTCCAAATATTTCTTGAAATTGTGTGTCAGTGTCT
CGCAACCTGACCGCAGTATAAATCTACGAGTAGACGATTCCAGCGAGACA
ACTCCTAGACCACTCAATACGGAACCGGGTATCCTCTGTAAAGGGAAGCC
AGTCATCATCTTTTATTCAACGGTGTAATTTTGATTTGTTTGGAATAAGA
ATTGTAAAGATTATTGTTGACAACCATATTCGTTTTCGTTTTCATAGCAT
GATGTTAAGATAAAACAGGAAGAAGAGGAAGGAGAGGGAGACATAGAAGT
CGATTTTGTAGTCGAAGAACAGGCGGAAGAAGAGGCGGTAGTAGAAGTAG
AAGAAGCGTTAGCTCTTCCCGCGCCAACACCACAACCATCACCATCACCA
TCACCTGCTCCTCTCTCCAAACGAGGCCGCCCAAGACTAGAATATGGAGC
GAGGAGAAGGATCGGTCAAGGAAAGGGTCATCATATCGGTAAACGTACAA
AACGCCACAAAAAGTCGGCCGATGATGACTGCTTACCCTTGACCGAGGAA
AGAATAAAAGAAATGAAAGTGGTGGTATTGTGGGAAGAGCTAAGACGAAG
AAATCTATCGTGCAAAGGGGTGAAAGCGGTGCTGGCGGAAAGGTTGTTAC
ACCACTGGAGAGAGCACGAGGAAGAACAAGAGGAAAGGAAGAAGAGAAGA
AAAAATGATGACGATGATATTGGTGGCCCCGGGCCCAGTGGTATGTCCGT
TTAGTTTATTTTTTGTTATTTTTTGCTTGATATTTTTTTATTTTTAATTT
TTAAACTTTTATATTTGACATACCCTGGGTTACTTCTCTTCTTTCTTCGC
CTTTGTTCTTTCTCGTTAATCTCCGAAAAAAATGCCAATAGTTTTAATAA
CTTTTCAAATATAAACCTTTCAAATCCTGTTCGGCCGCTTCTTTTTTCGC
TTTGCTTCGCT

Coding sequence (CDS) from alignment at scaffold_119:10922..19132-

>TCONS_00046974 ID=TCONS_00046974|Name=TCONS_00046974|organism=Clytia hemisphaerica|type=CDS|length=1800bp|location=Sequence derived from alignment at scaffold_119:10922..19132- (Clytia hemisphaerica)
CATGATGTTAAGATAAAACAGGAAGAAGAGGAAGGAGAGGGAGACATAGA
AGTCGATTTTGTAGTCGAAGAACAGGCGGAAGAAGAGGCGGTAGTAGAAG
TAGAAGAAGCGTTAGCTCTTCCCGCGCCAACACCACAACCATCACCATCA
CCATCACCTGCTCCTCTCTCCAAACGAGGCCGCCCAAGACTAGAATATGG
AGCGAGGAGAAGGATCGGTCAAGGAAAGGGTCATCATATCGGTAAACGTA
CAAAACGCCACAAAAAGTCGGCCGATGATGACTGCTTACCCTTGACCGAG
GAAAGAATAAAAGAAATGAAAGTGGTGGTATTGTGGGAAGAGCTAAGACG
AAGAAATCTATCGTGCAAAGGGGTGAAAGCGGTGCTGGCGGAAAGGTTGT
TACACCACTGGAGAGAGCACGAGGAAGAACAAGAGGAAAGGAAGAAGAGA
AGAAAAAATGATGACGATGATATTGGTGGCCCCGGGCCCAGTGGTATGTC
CGTTTAGAATGGTCAGGATATTGTCGGCGTCGAAATTTCAGAAACAATAT
CCATAGACCTGGGAAGATCCAAATTGTTGGTTCGCATGGAATTTATACAG
CATGATGTTAAGATAAAACAGGAAGAAGAGGAAGGAGAGGGAGACATAGA
AGTCGATTTTGTAGTCGAAGAACAGGCGGAAGAAGAGGCGGTAGTAGAAG
TAGAAGAAGCGTTAGCTCTTCCCGCGCCAACACCACAACCATCACCATCA
CCATCACCTGCTCCTCTCTCCAAACGAGGCCGCCCAAGACTAGAATATGG
AGCGAGGAGAAGGATCGGTCAAGGAAAGGGTCATCATATCGGTAAACGTA
CAAAACGCCACAAAAAGTCGGCCGATGATGACTGCTTACCCTTGACCGAG
GAAAGAATAAAAGAAATGAAAGTGGTGGTATTGTGGGAAGAGCTAAGACG
AAGAAATCTATCGTGCAAAGGGGTGAAAGCGGTGCTGGCGGAAAGGTTGT
TACACCACTGGAGAGAGCACGAGGAAGAACAAGAGGAAAGGAAGAAGAGA
AGAAAAAATGATGACGATGATATTGGTGGCCCCGGGCCCAGTGGTATGTC
CGTTTAGAATGGTCAGGATATTGTCGGCGTCGAAATTTCAGAAACAATAT
CCATAGACCTGGGAAGATCCAAATTGTTGGTTCGCATGGAATTTATACAG
CATGATGTTAAGATAAAACAGGAAGAAGAGGAAGGAGAGGGAGACATAGA
AGTCGATTTTGTAGTCGAAGAACAGGCGGAAGAAGAGGCGGTAGTAGAAG
TAGAAGAAGCGTTAGCTCTTCCCGCGCCAACACCACAACCATCACCATCA
CCATCACCTGCTCCTCTCTCCAAACGAGGCCGCCCAAGACTAGAATATGG
AGCGAGGAGAAGGATCGGTCAAGGAAAGGGTCATCATATCGGTAAACGTA
CAAAACGCCACAAAAAGTCGGCCGATGATGACTGCTTACCCTTGACCGAG
GAAAGAATAAAAGAAATGAAAGTGGTGGTATTGTGGGAAGAGCTAAGACG
AAGAAATCTATCGTGCAAAGGGGTGAAAGCGGTGCTGGCGGAAAGGTTGT
TACACCACTGGAGAGAGCACGAGGAAGAACAAGAGGAAAGGAAGAAGAGA
AGAAAAAATGATGACGATGATATTGGTGGCCCCGGGCCCAGTGGTATGTC
CGTTTAGAATGGTCAGGATATTGTCGGCGTCGAAATTTCAGAAACAATAT
CCATAGACCTGGGAAGATCCAAATTGTTGGTTCGCATGGAATTTATACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029969XLOC_029969Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046974-proteinTCONS_00046974-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046974-exon-scaffold_119-1575043694:19069..19132TCONS_00046974-exon-scaffold_119-1575043694:19069..19132Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1575043694:15324..15353TCONS_00046974-exon-scaffold_119-1575043694:15324..15353Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1575043694:10922..11635TCONS_00046974-exon-scaffold_119-1575043694:10922..11635Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1510915933:19069..19132TCONS_00046974-exon-scaffold_119-1510915933:19069..19132Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1510915933:15324..15353TCONS_00046974-exon-scaffold_119-1510915933:15324..15353Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1510915933:10922..11635TCONS_00046974-exon-scaffold_119-1510915933:10922..11635Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1491911889:19069..19132TCONS_00046974-exon-scaffold_119-1491911889:19069..19132Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1491911889:15324..15353TCONS_00046974-exon-scaffold_119-1491911889:15324..15353Clytia hemisphaericaexon
TCONS_00046974-exon-scaffold_119-1491911889:10922..11635TCONS_00046974-exon-scaffold_119-1491911889:10922..11635Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_119supercontigscaffold_119:10922..19132 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.592283	0.375171	1.27416	1.83705	0.239618	0.126233	0.152295	0.427729	0.149732	0.123645	0.240025	0.157783	0.157563	0.204539	0.134527	0.252644	0.0889249	0.273435	0	0.263537	0.229061	0.083796	0.20373	0.24696	0.699499	0.624286	0.0812137	0.173347	0.52591	0.334887
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046974 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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