TCONS_00047578 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047578
Unique NameTCONS_00047578
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2824

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047578 ID=TCONS_00047578|Name=TCONS_00047578|organism=Clytia hemisphaerica|type=transcript|length=2824bp
TTAGGGTTAAGACTTGTTAAGGCttgtaaacattttttgttgtttttgta
tgtTCAGTATATTTCATCATCGTTGGAGAAAATTCACATTAAAGTTATCT
GAGCTCAAATTGTCGTGTTCCAATGTGGATGCAGGTTCAGAGTAATCTCA
CCGGAGATGTTTTCGACCAGTGTTTCTAcgcttttatttttaatttttta
taaattacttTATTTTAGTCAAGCTTAGACTACTTATTTACACTACAATC
CAGTGTATTTTCCTCTAAGTAACCAAATCTGTCTGTCTGCCTGTCTGTCT
GTCTTGTCTTTTTTCAAGTACTTActcaaaaattgatttgtttaaaacac
ccctgtctcacagccccggtggaacttttttcttcagtgggaataaaaat
caacaatgattgattttcaagtggggttgaaattccagggtattttcgca
ccggggaccaaatttttgccaaatgtcccaatgggtctgtgacacagggg
tgttttaaagtTGCAGCGTTCAAAAGAGTCTCTTAAGTATGTGCTCATCA
GTTATCAGTAACTTGAGAACTTTTCGCTTTAAATTCCTTTTTATTGATAT
CATTTTTTTGTTAACTAAGATAGAAACCCCAGGAGGGGGTGTCACTTAGG
CAGAATTGGGTACGGCGACGTGCCgttggtcagggtcccttttttagact
tttttagaTTAGAAGATAACGGACAGGatcccaaatttactaaatttcaa
gatttgaATCCGACAGGGTTGACTTTCGGCTATTTTAGACGATTTTCAGA
ATGGAAATTACAGTAAAGCatagatatttttcaaatatcggtgtttgaaa
gaaaaagttattgttatcccagctggcacacaacgttgttttaacgttct
tctaacgttatatggacgttgtgaacgttgtatggacgttgaaataacgt
tgtgttcCGGCTGGGATATTAGTGATCGAAAGAAAAGGTATATTGGTATC
TCAAAGCAACATAAGCCCACACACAATCATctataaacctttttttttca
ggGAAGGTCTACCTGCTTCGGGACCCACTGTCCATAGAAGGGGTCGTACG
ACATGTGGTGATAAAATATGGATTTTAGTAAATTTGTTGTTGGAGATGCA
AGAAAAATGCGTCGACCTCTTAAACATACTTTCTATAAAGATAAGAAAAC
ATTCtaaagaaacattttttcgcTAGAGAATGAGCAGAAGCCTCGTACTT
CGGTGCTCTCAAGCCCATACataaattttgtcaaattttcctcGAAATCT
GAGGAGGGGCTTAACTCGTATTTTATTAAGCCCTCATCACATTATATCAA
GTACTATCAAGTATCATGATAATCAAGAATTGCCGATTCCAATGAACAAA
ATAAGGATCCTTGTCCAGAAGAAACATTGAACCTGGTTCGATATCCACGA
CTACCCTATGAAGGAGATCAACTCGAAGGATTCTGCATCAAGAATGCTGT
TAATCACGTCCCTGGTTCTAcactaaaaataatttgtggTACAAAAGGAA
ATTTCACTGTGCAAGGAGCATGTGTTTGCAAACCTGGATATTTTTTGAAT
GGTTACAAATGCCAAGCATGTCAAGATGGTTACATGAAATCGGAACCTGG
GAATGGCAAATGTCTTCATCCAGGGCGAAACACGATCCCGTGCACATCAA
CAACTCCAGTATGTCCTTGTAAAGAGAAGTTCTTTCGAGTTCTGGAAGAG
AAATCATCTCCCGGGACGCATTGTTATCAGGCAGGAAGAATCAATAAGCT
ACGGTACTCAAACTTCACTGACGGTTCAGTACGGTTGACTTGGGATGTGC
CTTATTACAGGACCGGCTATCGACCTACATTTCTAATAACTATTGACGGA
AAAGCGAGTACACAGAAGGTGACGCGTTTGAACTTTCCGAAATCCAACTA
CACAAGACACTACAAAATACAGgtgGTAACTCAAGTCAAGGTTGGCGAGA
AGATATACCAAGGAGATGGATACACCAAAACAATCACTGTTTATAAAGAG
AGAGTCAGTGGTGCGATTCTATCGAAGCCACCGTTTTATCTGCTCTTGTT
CGCAGTTGCATTTATATTCATTATGTGAACAAAGCAAGTATTGGTTTTCA
GAAGAAGAAATAAAGCGATATAGCCACAAACGGAAGTAAAAAAGGACTTG
GTATCGCAGTCAGGAATATTTCCAACAGAGCTTCGATTAAGAATCTCGAT
AGAGGCTTTAGATAGAGGCTttgttaaaaaacttttaatgaatTCCATTG
GTTTTTGTGTTTGTGACCCATAATGATGAAACAAACTGGAAAATAACAGA
TGTTAATCATTTTTCCAGAATCGCTGGTGGGAGTGTGCTATACACCATTT
AACTGTTAAATTAGTGAAGTCATTCAAAGCGTACAACCACATCTTGGACT
CTGCTGTTGGGTTTTGTTAGCTTACCGGCGGGTTGCCACACTCTTCTGCA
GTCAATTCATCaattcaaacattcaaaagATTCCGAAAGTGAAAACTGtc
tgattttttcttaaaatttattttgaattcaaTAAAAAGAGTTACACTAA
CAATTTTGTATACGTATCTTTCTACTGATTTTTTTTAGCTTGGatttgaa
aaatagaatttcatcCATCATGGGGCAGGGGTGTTTTATTCGTCATTTAA
AGCTGGCAACCGTCTTTCCCTGAAGAATCTCATATCATCTCTATAATAAC
ACCCCTGAATCTTGatataaacatttttcaaattacttGGAGCTGGACGG
CACATTTAAAGCGAGCAAAACgag
Run BLAST on NCBI

protein sequence of TCONS_00047578-protein

>TCONS_00047578-protein ID=TCONS_00047578-protein|Name=TCONS_00047578-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MKSEPGNGKCLHPGRNTIPCTSTTPVCPCKEKFFRVLEEKSSPGTHCYQA
GRINKLRYSNFTDGSVRLTWDVPYYRTGYRPTFLITIDGKASTQKVTRLN
FPKSNYTRHYKIQVVTQVKVGEKIYQGDGYTKTITVYKERVSGAILSKPP
FYLLLFAVAFIFIM
Run BLAST on NCBI

transcript from alignment at scaffold_132:117063..123957-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047578 ID=TCONS_00047578|Name=TCONS_00047578|organism=Clytia hemisphaerica|type=transcript|length=6895bp|location=Sequence derived from alignment at scaffold_132:117063..123957- (Clytia hemisphaerica)
TTAGGGTTAAGACTTGTTAAGGCTTGTAAACATTTTTTGTTGTTTTTGTA
TGTTCAGTATATTTCATCATCGTTGGAGAAAATTCACATTAAAGTTATCT
GAGCTCAAATTGTCGTGTTCCAATGTGGATGCAGGTTCAGAGTAATCTCA
CCGGAGATGTTTTCGACCAGTGTTTCTACGCTTTTATTTTTAATTTTTTA
TAAATTACTTTATTTTAGTCAAGCTTAGACTACTTATTTACACTACAATC
CAGTGTATTTTCCTCTAAGTAACCAAATCTGTCTGTCTGCCTGTCTGTCT
GTCTTGTCTTTTTTCAAGTACTTACTCAAAAATTGATTTGTTTAAAACAC
CCCTGTCTCACAGCCCCGGTGGAACTTTTTTCTTCAGTGGGAATAAAAAT
CAACAATGATTGATTTTCAAGTGGGGTTGAAATTCCAGGGTATTTTCGCA
CCGGGGACCAAATTTTTGCCAAATGTCCCAATGGGTCTGTGACACAGGGG
TGTTTTAAAGTTGCAGCGTTCAAAAGAGTCTCTTAAGTATGTGCTCATCA
GTTATCAGTAACTTGAGAACTTTTCGCTTTAAATTCCTTTTTATTGATAT
CATTTTTTTGTTAACTAAGATAGAAACCCCAGGAGGGGGTGTCACTTAGG
CAGAATTGGGTACGGCGACGTGCCGTTGGTCAGGGTCCCTTTTTTAGACT
TTTTTAGATTAGAAGATAACGGACAGGATCCCAAATTTACTAAATTTCAA
GATTTGAATCCGACAGGGTTGACTTTCGGCTATTTTAGACGATTTTCAGA
ATGGAAATTACAGTAAAGCATAGATATTTTTCAAATATCGGTGTTTGAAA
GAAAAAGTTATTGTTATCCCAGCTGGCACACAACGTTGTTTTAACGTTCT
TCTAACGTTATATGGACGTTGTGAACGTTGTATGGACGTTGAAATAACGT
TGTGTTCCGGCTGGGATATTAGTGATCGAAAGAAAAGGTATATTGGTATC
TCAAAGCAACATAAGCCCACACACAATCATCTATAAACCTTTTTTTTTCA
GGGAAGGTCTACCTGCTTCGGGACCCACTGTCCATAGAAGGGGTCGTACG
ACATGTGGTGATAAAATATGGATTTTAGTAAATTTGTTGTTGGAGATGCA
AGAAAAATGCGTCGACCTCTTAAACATACTTTCTATAAAGATAAGAAAAC
ATTCTAAAGAAACATTTTTTCGCTAGAGAATGAGCAGAAGCCTCGTACTT
CGGTGCTCTCAAGCCCATACATAAATTTTGTCAAATTTTCCTCGAAATCT
GAGGAGGGGCTTAACTCGTATTTTATTAAGCCCTCATCACATTATATCAA
GTACTATCAAGTATCATGATAATGTACATTCTTAAAAAGAGATTATTTAC
TTTCAATTTGACAGCTTGATGTCAAAGATTTGTTCATATTTCCTTTCTCT
ACTAAGCTAAGACCATATGAATCATTATTCTGGTTAGGTTTTGTTTCAAA
GTACATCAAAAAGAGCTTATCGTAAAACGACTTCAATGTAGAATTTGAAA
AACATAAGAACAGTACAAACGCAACTTCAATTTTCAATTTGTTCGTATAT
CGTATTTATTGGTTTACCATCAATGGATGTACTTAAATTAGTGGTGCTTT
ACTTTACTTTAGCAAGAATTGCCGATTCCAATGAACAAAATAAGGTGAGT
GTGAGCTTTGTAATATACCTAAAACCCAAATTCGAACTCAGCCCCTTCAC
TTTTTTATATTTTCTGATAGCGCATCAACAGCGTAGACAAGGGGGGCACA
AAATTTGCACAGGAGAGCAGATTTTAATAACACTGTAATTATCTATCCAT
AATATATAAAAAGATAATTACTGTGTGCATAAAAATTTGCTCTCCTACAC
AAATTTGTGCCCCTCTTGGCTACGCTACTGCGCTCACGAATGTACCAATG
TCAATCAATTAATCAAAAAGTGATGGAAGTTGCTCTGGGTACGACATTGC
TGATATATAAACTTAATCCAAGCAATGTGTCAAAGAAAAAGCTTCACTAA
GAAATTGACTTATTCGAAATATTAGCCCATGTTATTATTCTTTTCCGATG
AAAAAATTAAAAGTAATTTTTTTGTTGTTGGAAAGAAGCACTTTCCTTGA
TAATCAGAACTAAACATTTGAAGAGCTATAGCTAATATAATTCTAAATTC
CCAAACCGCAATTTTTAAAGTCTCTTTTTTTTAATCTGTACAAACCTAAG
AACGCCCAAAATTTTGAGCCTTCGGATGTTTTTGAGATTTAAGCCTTATC
AATTATGTTCTTAAAATGTTCTTACTTTCACCATATCGTGAGTATTTCTT
TGCAATGTTCCTAAGAAATATTGTGTTTTTAGAGTCTCTATGTTCTCAAC
ATTCTTGTCATTGAAGCCTTATGTTCATACATAGTTTCTTATCATATAAA
AATATCATTCAACTAAATTTCTTATTCAACAATAGCAGGATCAATGTCCG
GTGACCAGACGTTTCCCCGATGGACGTTTCCCCGAGGGACTTTTCCCCGA
CGGACTTTTCCCCGAAAGACATTTCTTTATCTTTACAAATCTAGCCGAAA
AAAACAGTCTAATGAACAAGGGATGCTCATAGGTAAACATACTATGTAGA
TTTCTCATTTTAACAATAGGATCCTTGTCCAGAAGAAACATTGAACCTGG
TTCGATATCCACGACTACCCTATGAAGGAGATCAACTCGAAGGATTCTGC
ATCAAGAATGCTGTTAATCACGTCCCTGGTTCTACACTAAAAATAATTTG
TGGTACAAAAGGAAATTTCACTGTGCAAGGAGCATGTGTTTGCAAACCTG
GATATTTTTTGAATGGTTACAAATGCCAAGGTGATTTTAAGTTATTTTGC
TAACTCGAGCCAAGTTCCTTTATTTTGCTTTTTTATTCTGATAGCGATTG
TATCACGTGCATTAGTAAAATTAAGTTCACTACAGTAAGTGGCTCCGGGT
TTGAATTTGGAATTTTGCTTTGAACTGGAGGACACTAGTACTAAGACCAT
AAAAGCATTTTTAGGCAAAATTGAGGGCTGGAAAACCCAAGCTATGACGT
CCTAACTCGGGTTTTTCATAACTCGGGTTTTCATTACTCGGTTTTTTTAA
CTCGGATTTTCCAGGTTAAATATATTGAGTTAAGAAATATCAAATATAAA
AAAGCATTTGCATAGGGAAATGACTAGATGGAAAAATCTAAGTTTTCACT
ATTCTAAATCTGGATTGAGGTCTGCTTTTAATGTTAAAACAACCCCCTGA
CAAACCATATCTTTGCTACCATTTTGCGCTATTAACGACTGTGACAAACG
AAAAATTGTAATTGATAACACTTAACGGCTAACCAGGCTACCAATAACTA
GTTTAAAGATCCATCGGTCTTACAACTAACTTCATTTGCTTTTAGCATGT
CAAGATGGTTACATGAAATCGGAACCTGGGAATGGCAAATGTCTTCATCC
AGGGCGAAACACGATCCCGTGCACATCAACAACTCCAGTATGTCCTTGTA
AAGAGAAGTTCTTTCGAGTTCTGGAAGAGAAATCATCTCCCGGGACGCAT
TGTTATCGTAAGTTGTTTATTTTAACCCTAGGGTTTAGTGTTTGAACTAA
GCGACCGTGGTACAGTGGTAGAGCATCCTGCTATTGTGCGCAAGGTTGTA
GGTTCATCCCCCAGCCAGGCTATACCAAAGATTCCCAAAATGGTACTTGA
TGCCTCTCTGCTTGATGCCCAGCAATCAAGAGAAGGGTAAGTGGAGCAAT
CCAGGGAAAAAGAGTGGCGCCCTCCCCTGACTTCGGGTAAATAGCTATCA
ACGATAAAAGGAGCCTTCTGGTCGTCTCCGCCCGCGGTCTTTGACTTCCT
CACTAATTACTAGGGCCTAGTTTCAATTTGACTGTCAGCTTGGATCCTAA
TGAATTCAACTTTTGAGGGGTGCTAGGGTTGCAAGTTGAAATGGGGCAAA
AAGTTGAATTTGTTCTATTTACCAACCCTTAGTGGGACTGAGACATTGAT
ATTCTCTTCCTCTATAAAAATATGACATAAGTCGTCTCGGTAAAAAAGCA
TTTCCTTCAGTTTCTATTTTCCGAACAAAAAAATGAAGAAACATACAACG
GAGTCTCCTTAACCAAATGTCTTTTTAATTCGAACAAGTTTTCTAGTCCC
TTCAGTTCAAAATGCCTTATGGATCTTACTCCATAACTCGAAATTTCCAT
AACTGGAACAAATTTGTGTTCTCCCTGGGTGTTCGAGACTTAACTACCTG
GTACCCCTTTAAAATTATCACAGTATACCGAAATAGTGTCTTCTGCTAGT
ATTATTTAAAAGTTTGTTTCTTATATACATAACTTTTATTTAGAGGCAGG
AAGAATCAATAAGCTACGGTACTCAAACTTCACTGACGGTTCAGTACGGT
TGACTTGGGATGTGCCTTATTACAGGACCGGCTATCGACCTACATTTCTA
ATAACTATTGACGGAAAAGCGAGTACACAGAAGGTGACGCGTTTGAACTT
TCCGAAATCCAACTACACAAGACACTACAAAATACAGGTAAGGTTATAGT
TTGAAAATTGCGAGATGTTTAGGTGGAAGGGGTGTATATACTGACTTTAT
GCATGTGTGCTTTTCTGTGACAGGGATGGTAATGTTCTAATTTGTCTAGA
TCCTGACTGACTGAGGAGGACGGTAACTCATTATTGGCGGTGTGACGGTA
TGAGTCCGTTCTTCTGTCCGTGTTTGAAGAAAAAACTAACGGTATGCAGT
GACAAAACACAGTAGCCCCTGTACCCCTGTACGCCCAAACTAGAATTTTT
TTTAAGAAAGCAGCTCTAAATGATTCCATAAAAGTGTCTGTCTGAAATTT
TAGGGAGACATTTCTAACAATGATTTTAGCCCATCAGCTACGACCCTAAA
ATTTAACATTTTGGCTCCGGAAAAGGGAGTAATTCGAAAAATGGTTTTTT
GGTATCCTTAGTTAAGGAATTAGTCAGTTGAACTGGTCAAATAGGTAGCT
TAATATGATTTTCAAGGCTTAATGTTGGGTTCGTTGGTCAAAAAAGTTGT
AAAATTTTAATGTTTTCTGGGGGTCGAGAAAACTTGTTCAGGCCAGTCAA
CCGGACAATTCCATAACTAGGATGCCTTAGGGTACCTAAAAATCACCTTA
GGCTTACTCCCTCTTCAGAGCCCAAAATTTGTCTAGCTGACCGATTATTT
CATTTTTCCAGGTGGTAACTCAAGTCAAGGTTGGCGAGAAGATATACCAA
GGAGATGGATACACCAAAACAATCACTGTTTATAAAGAGAGAGTCAGTGG
TGGTAAGTGTTTATCTAACCCTGNATACCAAGGAGATGGATACACCAAAA
CAATCACTGTTTATAAAGAGAGAGTCAGTGGTGGTAAGTGTTTATCTAAC
CCTGTGTTATATTTTAGAGAGTTTATGTATGTCACGTTTTTCTTTATTTA
TAAGACAATCCTAATTTTTTGAAGCCTTTGGATTTTCTTAATTCTATGAG
TTTTAAGCCTAAAAATGTTTTTATTTTCACCTTTATGTGAATATTTTTGT
CCATTTTCCTTAAAAATTGAGTGTTATGGAGTCTGCAAAGCCTTAAAATA
TTTATAACTTGTTCTTAATAATTTAGCTATCGAAGCCAAATTAATCCTTA
TTAACCGAGGACGACGGTTAATTAGCACTTTTATAGTCCTCGATTTTGCG
GGTCAAAACACTGCGTGTTATTAAAAATCGCTTCAGTCACCCATGGTCCT
CAAAAGTGTAAATACATAAACTCGCTATTCACTGGAACGTCGAGACCCCC
ATTCCTTATACAAAAAAATTGTCAAAAAAAGCTTTAAGGCTGAACTTTCT
AACGGGAAAAACTGTATGATTTTAAGAGTCCCCAATTATTGAGCTTAAAT
TAGAATATCCCACCTTAAACGACATTTAGCAGTTTAAACGACATTTAGCT
TTCATTGGATCCGTACCAAGACAGCTGTCTGGATCCAGATATTCAACTAA
AAATAAGATCTGTAGCAGTTTTGAAAGTGGAGGATTTTTCACGGTATTAA
ACTATACTTATTTATCTTTTAATTCTCTTTACAGCGATTCTATCGAAGCC
ACCGTTTTATCTGCTCTTGTTCGCAGTTGCATTTATATTCATTATGTGAA
CAAAGCAAGTATTGGTTTTCAGAAGAAGAAATAAAGCGATATAGCCACAA
ACGGAAGTAAAAAAGGACTTGGTATCGCAGTCAGGAATATTTCCAACAGA
GCTTCGATTAAGAATCTCGATAGAGGCTTTAGATAGAGGCTTTGTTAAAA
AACTTTTAATGAATTCCATTGGTTTTTGTGTTTGTGACCCATAATGATGA
AACAAACTGGAAAATAACAGATGTTAATCATTTTTCCAGAATCGCTGGTG
GGAGTGTGCTATACACCATTTAACTGTTAAATTAGTGAAGTCATTCAAAG
CGTACAACCACATCTTGGACTCTGCTGTTGGGTTTTGTTAGCTTACCGGC
GGGTTGCCACACTCTTCTGCAGTCAATTCATCAATTCAAACATTCAAAAG
ATTCCGAAAGTGAAAACTGTCTGATTTTTTCTTAAAATTTATTTTGAATT
CAATAAAAAGAGTTACACTAACAATTTTGTATACGTATCTTTCTACTGAT
TTTTTTTAGCTTGGATTTGAAAAATAGAATTTCATCCATCATGGGGCAGG
GGTGTTTTATTCGTCATTTAAAGCTGGCAACCGTCTTTCCCTGAAGAATC
TCATATCATCTCTATAATAACACCCCTGAATCTTGATATAAACATTTTTC
AAATTACTTGGAGCTGGACGGCACATTTAAAGCGAGCAAAACGAG

Coding sequence (CDS) from alignment at scaffold_132:117063..123957-

>TCONS_00047578 ID=TCONS_00047578|Name=TCONS_00047578|organism=Clytia hemisphaerica|type=CDS|length=1980bp|location=Sequence derived from alignment at scaffold_132:117063..123957- (Clytia hemisphaerica)
CGATTCTATCGAAGCCACCGTTTTATCTGCTCTTGTTCGCAGTTGCATTT
ATATTCATTATGTGAGTGGTAACTCAAGTCAAGGTTGGCGAGAAGATATA
CCAAGGAGATGGATACACCAAAACAATCACTGTTTATAAAGAGAGAGTCA
GTGGTGAGGCAGGAAGAATCAATAAGCTACGGTACTCAAACTTCACTGAC
GGTTCAGTACGGTTGACTTGGGATGTGCCTTATTACAGGACCGGCTATCG
ACCTACATTTCTAATAACTATTGACGGAAAAGCGAGTACACAGAAGGTGA
CGCGTTTGAACTTTCCGAAATCCAACTACACAAGACACTACAAAATACAG
ATGAAATCGGAACCTGGGAATGGCAAATGTCTTCATCCAGGGCGAAACAC
GATCCCGTGCACATCAACAACTCCAGTATGTCCTTGTAAAGAGAAGTTCT
TTCGAGTTCTGGAAGAGAAATCATCTCCCGGGACGCATTGTTATCCGATT
CTATCGAAGCCACCGTTTTATCTGCTCTTGTTCGCAGTTGCATTTATATT
CATTATGTGAGTGGTAACTCAAGTCAAGGTTGGCGAGAAGATATACCAAG
GAGATGGATACACCAAAACAATCACTGTTTATAAAGAGAGAGTCAGTGGT
GAGGCAGGAAGAATCAATAAGCTACGGTACTCAAACTTCACTGACGGTTC
AGTACGGTTGACTTGGGATGTGCCTTATTACAGGACCGGCTATCGACCTA
CATTTCTAATAACTATTGACGGAAAAGCGAGTACACAGAAGGTGACGCGT
TTGAACTTTCCGAAATCCAACTACACAAGACACTACAAAATACAGATGAA
ATCGGAACCTGGGAATGGCAAATGTCTTCATCCAGGGCGAAACACGATCC
CGTGCACATCAACAACTCCAGTATGTCCTTGTAAAGAGAAGTTCTTTCGA
GTTCTGGAAGAGAAATCATCTCCCGGGACGCATTGTTATCCGATTCTATC
GAAGCCACCGTTTTATCTGCTCTTGTTCGCAGTTGCATTTATATTCATTA
TGTGAGTGGTAACTCAAGTCAAGGTTGGCGAGAAGATATACCAAGGAGAT
GGATACACCAAAACAATCACTGTTTATAAAGAGAGAGTCAGTGGTGAGGC
AGGAAGAATCAATAAGCTACGGTACTCAAACTTCACTGACGGTTCAGTAC
GGTTGACTTGGGATGTGCCTTATTACAGGACCGGCTATCGACCTACATTT
CTAATAACTATTGACGGAAAAGCGAGTACACAGAAGGTGACGCGTTTGAA
CTTTCCGAAATCCAACTACACAAGACACTACAAAATACAGATGAAATCGG
AACCTGGGAATGGCAAATGTCTTCATCCAGGGCGAAACACGATCCCGTGC
ACATCAACAACTCCAGTATGTCCTTGTAAAGAGAAGTTCTTTCGAGTTCT
GGAAGAGAAATCATCTCCCGGGACGCATTGTTATCCGATTCTATCGAAGC
CACCGTTTTATCTGCTCTTGTTCGCAGTTGCATTTATATTCATTATGTGA
GTGGTAACTCAAGTCAAGGTTGGCGAGAAGATATACCAAGGAGATGGATA
CACCAAAACAATCACTGTTTATAAAGAGAGAGTCAGTGGTGAGGCAGGAA
GAATCAATAAGCTACGGTACTCAAACTTCACTGACGGTTCAGTACGGTTG
ACTTGGGATGTGCCTTATTACAGGACCGGCTATCGACCTACATTTCTAAT
AACTATTGACGGAAAAGCGAGTACACAGAAGGTGACGCGTTTGAACTTTC
CGAAATCCAACTACACAAGACACTACAAAATACAGATGAAATCGGAACCT
GGGAATGGCAAATGTCTTCATCCAGGGCGAAACACGATCCCGTGCACATC
AACAACTCCAGTATGTCCTTGTAAAGAGAAGTTCTTTCGAGTTCTGGAAG
AGAAATCATCTCCCGGGACGCATTGTTATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030307XLOC_030307Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047578-exon-scaffold_132-1575043694:122585..123957TCONS_00047578-exon-scaffold_132-1575043694:122585..123957Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1575043694:122264..122295TCONS_00047578-exon-scaffold_132-1575043694:122264..122295Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1575043694:121078..121288TCONS_00047578-exon-scaffold_132-1575043694:121078..121288Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1575043694:120351..120512TCONS_00047578-exon-scaffold_132-1575043694:120351..120512Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1575043694:119371..119564TCONS_00047578-exon-scaffold_132-1575043694:119371..119564Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1575043694:118606..118696TCONS_00047578-exon-scaffold_132-1575043694:118606..118696Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1575043694:117063..117823TCONS_00047578-exon-scaffold_132-1575043694:117063..117823Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1510915933:122585..123957TCONS_00047578-exon-scaffold_132-1510915933:122585..123957Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1510915933:122264..122295TCONS_00047578-exon-scaffold_132-1510915933:122264..122295Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1510915933:121078..121288TCONS_00047578-exon-scaffold_132-1510915933:121078..121288Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1510915933:120351..120512TCONS_00047578-exon-scaffold_132-1510915933:120351..120512Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1510915933:119371..119564TCONS_00047578-exon-scaffold_132-1510915933:119371..119564Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1510915933:118606..118696TCONS_00047578-exon-scaffold_132-1510915933:118606..118696Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1510915933:117063..117823TCONS_00047578-exon-scaffold_132-1510915933:117063..117823Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1491911889:122585..123957TCONS_00047578-exon-scaffold_132-1491911889:122585..123957Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1491911889:122264..122295TCONS_00047578-exon-scaffold_132-1491911889:122264..122295Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1491911889:121078..121288TCONS_00047578-exon-scaffold_132-1491911889:121078..121288Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1491911889:120351..120512TCONS_00047578-exon-scaffold_132-1491911889:120351..120512Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1491911889:119371..119564TCONS_00047578-exon-scaffold_132-1491911889:119371..119564Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1491911889:118606..118696TCONS_00047578-exon-scaffold_132-1491911889:118606..118696Clytia hemisphaericaexon
TCONS_00047578-exon-scaffold_132-1491911889:117063..117823TCONS_00047578-exon-scaffold_132-1491911889:117063..117823Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047578-proteinTCONS_00047578-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_132supercontigscaffold_132:117063..123957 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.506492	0.577036	0	0.207471	0	0	0.679363	1.53325	0	0.198134	0	0.238624	1.82965	0.357252	0.827885	0.361837	1.12473	1.4647	1.27197	0.810489	0	0	2.22737e-06	0	2.44694	3.07036	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047578 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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