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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047636 ID=TCONS_00047636|Name=TCONS_00047636|organism=Clytia hemisphaerica|type=transcript|length=968bp
GTtaaaaaatatcatgaaataaaCAAGCAGATAAAAGAGAAGTCTTCATT
TTGGTACCGGATTTACAAGAAAAAAGACCACAGATACAAACCAGATGTAA
GGAGAAGAGAATCGGAAGCTACGGTACTACGTTTCAtcgaaaacattttg
aaaataaacgaTAGGCAGGAGTGAAAAAGAATACATTTAGAGTCTTGATA
CAGAATCAGATCAATGAAATTCACATATTGAAATTTATTGGAATTCGTAC
ATTTGGAGTCTTTAGGAACAGAATCAGATCGACCAGATCGCAGATTGATA
TTTGTTGGAAAATTTAgatacgtgaagcaacaaaaagcCATTTTAACACA
CGTTCGAACAAAAATTGTAATTAGACAGACCCGAAAGCATTCAAATATGG
GTTGCACAATAAGCAGCAATACAGTACATCCATCAGATGAAAGTGACCAA
AGATGCCATAAAAATGGAACACCACAATTAGTTGTTGAATTGGCCGGTGT
TGATAACCGTGAAGTCCAGCTAATGGTTGAACGAAAAGAGATTGTTCATT
ACCGAGTTGTTTCATTAAGAACTGAGATAGACAGGTACGATGATATCATT
TCTCAATTGGAAAACCCAAAATTGTATCATCCACCAACcaataaagaaaa
tataaacaataaTAAGAAAAACGATAATAATGGCGCAAGTAGAAGTGAAA
GTGAAATTAAAACATAATTAGCTTTAGAGTTGATTTATTAAGGGATGAAA
GTtgttaaagaaaatgaaagtggtATCAAGAACGCGTCGACGATgacaaa
acttcatttttgagtAATGGAGCAAGCCGTTTGGAAGTTAAATATTAGAA
ACACACAtttgaaaacacaaaaaaagaaTGGAAATAATTCGTGTCAGTTG
AATTATACAAAGAGAAAGTGTACATAATAAGtaatactcttaggtgccaa
ataaacgccccccccccN Run BLAST on NCBI transcript from alignment at scaffold_133:232801..233904+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047636 ID=TCONS_00047636|Name=TCONS_00047636|organism=Clytia hemisphaerica|type=transcript|length=1104bp|location=Sequence derived from alignment at scaffold_133:232801..233904+ (Clytia hemisphaerica)
GTtaaaaaatatcatgaaataaaCAAGCAGATAAAAGAGAAGTCTTCATT
TTGGTACCGGATTTACAAGAAAAAAGACCACAGATACAAACCAGATGTAA
GGAGAAGAGAATCGGAAGCTACGGTACTACGTTTCAtcgaaaacattttg
aaaataaacgaTAGGCAGGAGTGAAAAAGAATACATTTAGAGTCTTGATA
CAGAATCAGATCAATGAAATTCACATATTGAAATTTATTGGAATTCGTAC
ATTGGGAGTCTTTAGGAACAGAATCAGATCAATGAAATTCACATATTGAA
ATTTATTGGAATTCGTACATTGGGAGTCTTTAGGAACAGAATCAGATCAG
TGAAATTCACATATTGAAATTTATTGGAATTCGTACATTTGGAGTCTTTA
GGAACAGAATCAGATCGACCAGATCGCAGATTGATATTTGTTGGAAAATT
TAgatacgtgaagcaacaaaaagcCATTTTAACACACGTTCGAACAAAAA
TTGTAATTAGACAGACCCGAAAGCATTCAAATATGGGTTGCACAATAAGC
AGCAATACAGTACATCCATCAGATGAAAGTGACCAAAGATGCCATAAAAA
TGGAACACCACAATTAGTTGTTGAATTGGCCGGTGTTGATAACCGTGAAG
TCCAGCTAATGGTTGAACGAAAAGAGATTGTTCATTACCGAGTTGTTTCA
TTAAGAACTGAGATAGACAGGTACGATGATATCATTTCTCAATTGGAAAA
CCCAAAATTGTATCATCCACCAACcaataaagaaaatataaacaataaTA
AGAAAAACGATAATAATGGCGCAAGTAGAAGTGAAAGTGAAATTAAAACA
TAATTAGCTTTAGAGTTGATTTATTAAGGGATGAAAGTtgttaaagaaaa
tgaaagtggtATCAAGAACGCGTCGACGATgacaaaacttcatttttgag
tAATGGAGCAAGCCGTTTGGAAGTTAAATATTAGAAACACACAtttgaaa
acacaaaaaaagaaTGGAAATAATTCGTGTCAGTTGAATTATACAAAGAG
AAAGTGTACATAATAAGtaatactcttaggtgccaaataaacgccccccc
cccN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047636-exon-scaffold_133-1491911889:232801..233024 | TCONS_00047636-exon-scaffold_133-1491911889:232801..233024 | Clytia hemisphaerica | exon |
| TCONS_00047636-exon-scaffold_133-1510915933:232801..233024 | TCONS_00047636-exon-scaffold_133-1510915933:232801..233024 | Clytia hemisphaerica | exon |
| TCONS_00047636-exon-scaffold_133-1575043694:232801..233024 | TCONS_00047636-exon-scaffold_133-1575043694:232801..233024 | Clytia hemisphaerica | exon |
| TCONS_00047636-exon-scaffold_133-1491911889:233161..233904 | TCONS_00047636-exon-scaffold_133-1491911889:233161..233904 | Clytia hemisphaerica | exon |
| TCONS_00047636-exon-scaffold_133-1510915933:233161..233904 | TCONS_00047636-exon-scaffold_133-1510915933:233161..233904 | Clytia hemisphaerica | exon |
| TCONS_00047636-exon-scaffold_133-1575043694:233161..233904 | TCONS_00047636-exon-scaffold_133-1575043694:233161..233904 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_133 | supercontig | scaffold_133:232801..233904 + |
Blast
The following BLAST results are available for this feature:
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