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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047900 ID=TCONS_00047900|Name=TCONS_00047900|organism=Clytia hemisphaerica|type=transcript|length=1155bp
TACTAGTTTGACactaaaattgtttaaaatcaGCACCCTTCTTATATTGT
TTCTTTTTGGCAAATTTATTGCTCTTACCAAAAAGTGTACTTATCATTCT
ACTTTCTACTGCGTTTGTGAATCGTTTTCCATGCCATTTCATACAGTCTG
TTCCAAGAAAAGCCGACCAGAATCTATCAAAGCttattaaaaatcttttg
tcttcaataaattactttttattttattacgtTCAATATATTCTGGATTG
CCCAAACAATTAATTAATTTGACTACACAAAGGATTGATATGGAGAGATA
TAATATTGAGGGAGCACAGAGAAGACTTTACCAGATATCGAGACAACTCA
ACAACTCGCTACACTACTATTCTGAAACACTACATGACATTAATTTCGAT
CATTTCGCAAACCTTCCTCCAACAGAGTTGGAACCAGAGCGTGGTTATGA
TTTCAACCTTGTCAATGAAGGGCAGAATGTATCTGGCTTAAAATGCACGA
TTTGTCATTTATTTTTGCGTGAAACACACTCAACACCGTGTCACCACGCT
TTTTGCCGTGGATGTCTCATGAAATGGAATCAACAACAGCCCAGTAATGC
AAGGGGGTAGACAACATTATTCACCCGTATTCCAGTCTTATCACATAGAG
AAAGTGTCTACTTCGCGTCGTAGGGGTGGCACAGTCACTTTCGGTCGGGG
TTGTGGATGGTGAAATTTTTCGTTTTTTTTTAATGTTGCGATGTAGGCAC
TTTCTCCCTCCTCTTATAGATACATGTTATAATCCAAGAAAAGATGGTTT
ATTGAAGCTAAGACACAAGTTTCACTTCAAATGTGCACAGCCCTTTATCC
TAACAACCTCAAAAATGTTTTAACGTGTCGCCTAAATCAAACACTGACAC
CACcccaattttctgacttgaaaacaatggaatttaaatccctaaccaaa
aaaatatgggaatatcaatccccatcgagttgcggttcgttatttttacc
ccaaatgtttgaaaaaattctaccggatctgtgagaagggggtctTTCTA
GAGGAGACTCATAATTGTTGATCCAAAATCAGAATGAATGCGAATGTTTA
CTGGGTACAGAGGATTAAAATCTTTGACTCGACAAAAAGTGCTACCCgat
ctacc Run BLAST on NCBI transcript from alignment at scaffold_139:640739..641893+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047900 ID=TCONS_00047900|Name=TCONS_00047900|organism=Clytia hemisphaerica|type=transcript|length=1155bp|location=Sequence derived from alignment at scaffold_139:640739..641893+ (Clytia hemisphaerica)
TACTAGTTTGACactaaaattgtttaaaatcaGCACCCTTCTTATATTGT
TTCTTTTTGGCAAATTTATTGCTCTTACCAAAAAGTGTACTTATCATTCT
ACTTTCTACTGCGTTTGTGAATCGTTTTCCATGCCATTTCATACAGTCTG
TTCCAAGAAAAGCCGACCAGAATCTATCAAAGCttattaaaaatcttttg
tcttcaataaattactttttattttattacgtTCAATATATTCTGGATTG
CCCAAACAATTAATTAATTTGACTACACAAAGGATTGATATGGAGAGATA
TAATATTGAGGGAGCACAGAGAAGACTTTACCAGATATCGAGACAACTCA
ACAACTCGCTACACTACTATTCTGAAACACTACATGACATTAATTTCGAT
CATTTCGCAAACCTTCCTCCAACAGAGTTGGAACCAGAGCGTGGTTATGA
TTTCAACCTTGTCAATGAAGGGCAGAATGTATCTGGCTTAAAATGCACGA
TTTGTCATTTATTTTTGCGTGAAACACACTCAACACCGTGTCACCACGCT
TTTTGCCGTGGATGTCTCATGAAATGGAATCAACAACAGCCCAGTAATGC
AAGGGGGTAGACAACATTATTCACCCGTATTCCAGTCTTATCACATAGAG
AAAGTGTCTACTTCGCGTCGTAGGGGTGGCACAGTCACTTTCGGTCGGGG
TTGTGGATGGTGAAATTTTTCGTTTTTTTTTAATGTTGCGATGTAGGCAC
TTTCTCCCTCCTCTTATAGATACATGTTATAATCCAAGAAAAGATGGTTT
ATTGAAGCTAAGACACAAGTTTCACTTCAAATGTGCACAGCCCTTTATCC
TAACAACCTCAAAAATGTTTTAACGTGTCGCCTAAATCAAACACTGACAC
CACcccaattttctgacttgaaaacaatggaatttaaatccctaaccaaa
aaaatatgggaatatcaatccccatcgagttgcggttcgttatttttacc
ccaaatgtttgaaaaaattctaccggatctgtgagaagggggtctTTCTA
GAGGAGACTCATAATTGTTGATCCAAAATCAGAATGAATGCGAATGTTTA
CTGGGTACAGAGGATTAAAATCTTTGACTCGACAAAAAGTGCTACCCgat
ctacc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047900-exon-scaffold_139-1491911889:640739..641893 | TCONS_00047900-exon-scaffold_139-1491911889:640739..641893 | Clytia hemisphaerica | exon |
| TCONS_00047900-exon-scaffold_139-1510915933:640739..641893 | TCONS_00047900-exon-scaffold_139-1510915933:640739..641893 | Clytia hemisphaerica | exon |
| TCONS_00047900-exon-scaffold_139-1575043694:640739..641893 | TCONS_00047900-exon-scaffold_139-1575043694:640739..641893 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_139 | supercontig | scaffold_139:640739..641893 + |
Blast
The following BLAST results are available for this feature:
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