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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004883 ID=TCONS_00004883|Name=TCONS_00004883|organism=Clytia hemisphaerica|type=transcript|length=660bp
TTCCAAACACGAGATTGagatgaaaaagaagatttcttccaagaagttat
ACATCACCAAACCAATAAACTACCAGAATAATTTGGATGGTAATTTAGGT
GAATGTCCGTCATCCTTGCGTTGTATGGATCTTTTGTTATCGTATCCTTG
CACATATGATGACCATTGTGGCCCTGGGTTGTCGTGTTGTCAAACCGCTT
GTGGTTACTTCCAAAAGATGTGCCTACCAAAAATAACACGACACTGTCCG
CTACAACTACCATTGATGGGACACCGGGTACCCTGCCATGCGGAAGGAGA
CTGTCCACTAAGGCACACGTGTTGTTTGGATCTGGCCAATAATAAGTACT
GCAGGTCTCTGAGGGAAGACTGAAACTAAATCATTTTCAATGGAGAAAGA
ATTTAACGACTTTGCAACTGATAAACGATCAGAATATATGTTGACACCGA
CTATATGACTATAAGACATCACAAATAATTAATGACCATTACATTATACC
CTTGTCTTGTTGACCTCGGTGGAATGTATTAACATTTACGATGCATGTTA
CAGAGTACGAGAAAAATACAGTATTTCAATTATGATGGAAGAGCTCTTGT
TTTTTTCAGGTGGTATCAGCTGGCATAATTTTATCAAACTTTTGTAAATA
ACACATCAAA Run BLAST on NCBI transcript from alignment at sc0000049:30598..32027- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004883 ID=TCONS_00004883|Name=TCONS_00004883|organism=Clytia hemisphaerica|type=transcript|length=1430bp|location=Sequence derived from alignment at sc0000049:30598..32027- (Clytia hemisphaerica)
TTCCAAACACGAGATTGAGATGAAAAAGAAGATTTCTTCCAAGAAGTTAT
ACATCACCAAACCAATAAACTACCAGAATAATTTGGATGGTAATTTAGGT
AAAAAGGACCAGGACTTATAAATGGATTTTGTCAACACTGATAATTTTTA
CTCTAAGATTTATTCACCGTGACAGAATCTTAAAGGGTTCTTGAACTATT
AACAAGCTTTGTGTAAAAATTGGTTGTAATTAAACAAAATATACTCGCCC
GTTATTGATAAGGACGATATCCTAGAGAAAGTCTGTAAGACCAAGGAACT
TTAACTTGACTTTTATTTAAGCACGATATCTAGCCCTTCGGGCTTTATAA
ATCTACGGTTAAGTCCAGGAAATATAAACTTTCTCTGTTCATTATTATTA
AAACCCTTACCCGTATAAGACTAAGAGATATAATGTGACAATCAACCATT
TCAAAACAAATTAAACTAAAGTAACTTTTATCGCTTTCTACTCCCGACCG
AGTCCTCTACAGAAACAAAGCCTTACAAGAAACAGCAAACTTACTTTCTT
TTATCCGGAATCACAGGTGAATGTCCGTCATCCTTGCGTTGTATGGATCT
TTTGTTATCGTATCCTTGCACATATGATGACCATTGTGGCCCTGGGTTGT
CGTGTTGTCAAACCGCTTGTGGTTACTTCCAAAAGATGTGCCTACCAAAA
AGTAAGGATGATAATTAACTCTAAGCTGATATGCGTTTTTTATAAGAACA
TGATTCGATGGCCAAAATATAAAAAACAAGTTCAAACATTTTTGAGCTTA
AAACAAAATGTTAAGAACATTTGGAGCCTTCATAATTGTTTGATCTTCTT
ATAAAAAAATGTGGGATGAGGATAATATAAAGAATTCAGGTTTGTATTTT
ATGCGTAGATTTTAATTTCCCTCTTTTCATATTCGATACCGTTTGTTGAA
AAAAGGGGTTTTGATTTAATTGAACTGTTTTTTCACCATTATTTACTTTC
CAGTAACACGACACTGTCCGCTACAACTACCATTGATGGGACACCGGGTA
CCCTGCCATGCGGAAGGAGACTGTCCACTAAGGCACACGTGTTGTTTGGA
TCTGGCCAATAATAAGTACTGCAGGTCTCTGAGGGAAGACTGAAACTAAA
TCATTTTCAATGGAGAAAGAATTTAACGACTTTGCAACTGATAAACGATC
AGAATATATGTTGACACCGACTATATGACTATAAGACATCACAAATAATT
AATGACCATTACATTATACCCTTGTCTTGTTGACCTCGGTGGAATGTATT
AACATTTACGATGCATGTTACAGAGTACGAGAAAAATACAGTATTTCAAT
TATGATGGAAGAGCTCTTGTTTTTTTCAGGTGGTATCAGCTGGCATAATT
TTATCAAACTTTTGTAAATAACACATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004883-exon-sc0000049-1575043694:31930..32027 | TCONS_00004883-exon-sc0000049-1575043694:31930..32027 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1575043694:31327..31461 | TCONS_00004883-exon-sc0000049-1575043694:31327..31461 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1575043694:30598..31024 | TCONS_00004883-exon-sc0000049-1575043694:30598..31024 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1510915933:31930..32027 | TCONS_00004883-exon-sc0000049-1510915933:31930..32027 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1510915933:31327..31461 | TCONS_00004883-exon-sc0000049-1510915933:31327..31461 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1510915933:30598..31024 | TCONS_00004883-exon-sc0000049-1510915933:30598..31024 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1491911889:31930..32027 | TCONS_00004883-exon-sc0000049-1491911889:31930..32027 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1491911889:31327..31461 | TCONS_00004883-exon-sc0000049-1491911889:31327..31461 | Clytia hemisphaerica | exon |
| TCONS_00004883-exon-sc0000049-1491911889:30598..31024 | TCONS_00004883-exon-sc0000049-1491911889:30598..31024 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049 | supercontig | sc0000049:30598..32027 - |
Blast
The following BLAST results are available for this feature:
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