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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049329 ID=TCONS_00049329|Name=TCONS_00049329|organism=Clytia hemisphaerica|type=transcript|length=960bp
TTGAACGATTTCATACCATATTTTGAGGTACATAATGTCGTACAATTCCT
GATCTATTTACAACTTTTAATAATATACACACAAAAAATATTCGCAAATT
TCAAATACAACTTATATAACTTGTAaggataatttttgaaatacaggAAA
ATCGTctgtcaattttttaaaaacacttcAAGGTACTATACGTCTTTAAG
GCTTTTAGCTCTCAAATAGAGCCTTGTCAAAACAGATGATCAAACAAttt
atattttagcgaaaaaATCAGAACTTTGGCCACACAGAAGAATgtaattt
aaacaaaaaaaagaagaaaaatactGAATAATTACTTAGCATAATATATA
CAAGCCATAATATTAACAAAATATCAATTATATTTTAGAGAATTGATAAC
AGATATAATAATTTGTAATCCCCAATTAACATCTCTTGAACTCCAGTGTT
AAGATTCTTAAAACATGAATATTTAGAAAACGCAAGCACTTGTTCAAGCC
GAATAAAAGGCGAATTTCGCCAGTCGATGGTTTAAATATTCATTTCAAGT
TCTTACAGTACAGTTAAAGTCATCTTTCATATTTCCAAAAACGCACGCGA
GTTCCATATTAACCCCCCAACCCCACAGAGTTAATCTGATGAAATCCCAC
CTTTATATATTCACAATTCAAGGCTATATTAACACTTTATATCGCTAACC
TACCAGAAAAAAGACCGCTAGTGTGTCCAACACTTATGgtacttttaaaa
aataattctaatAACCTAATTAACTACTTTAAAAAATATACTTTTCATTT
TAAACATtgattattttaaaatatttataatcATTGACAATTGTACGGTG
AAATGCATAAGAATGGGTGTTCACTTAAAACTTATTTGTTTCGAATttct
aaagaaagaaaaatcttttttgagacAAATCCATTTATTAGttattccat
taaaaaacca Run BLAST on NCBI transcript from alignment at scaffold_154:358059..359018 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049329 ID=TCONS_00049329|Name=TCONS_00049329|organism=Clytia hemisphaerica|type=transcript|length=960bp|location=Sequence derived from alignment at scaffold_154:358059..359018 (Clytia hemisphaerica)
tggttttttaatggaataaCTAATAAATGGATTTgtctcaaaaaagattt
ttctttctttagaaATTCGAAACAAATAAGTTTTAAGTGAACACCCATTC
TTATGCATTTCACCGTACAATTGTCAATgattataaatattttaaaataa
tcaATGTTTAAAATGAAAAGTATATTTTTTAAAGTAGTTAATTAGGTTat
tagaattattttttaaaagtacCATAAGTGTTGGACACACTAGCGGTCTT
TTTTCTGGTAGGTTAGCGATATAAAGTGTTAATATAGCCTTGAATTGTGA
ATATATAAAGGTGGGATTTCATCAGATTAACTCTGTGGGGTTGGGGGGTT
AATATGGAACTCGCGTGCGTTTTTGGAAATATGAAAGATGACTTTAACTG
TACTGTAAGAACTTGAAATGAATATTTAAACCATCGACTGGCGAAATTCG
CCTTTTATTCGGCTTGAACAAGTGCTTGCGTTTTCTAAATATTCATGTTT
TAAGAATCTTAACACTGGAGTTCAAGAGATGTTAATTGGGGATTACAAAT
TATTATATCTGTTATCAATTCTCTAAAATATAATTGATATTTTGTTAATA
TTATGGCTTGTATATATTATGCTAAGTAATTATTCagtatttttcttctt
ttttttgtttaaattacATTCTTCTGTGTGGCCAAAGTTCTGATtttttc
gctaaaatataaaTTGTTTGATCATCTGTTTTGACAAGGCTCTATTTGAG
AGCTAAAAGCCTTAAAGACGTATAGTACCTTgaagtgtttttaaaaaatt
gacagACGATTTTcctgtatttcaaaaattatcctTACAAGTTATATAAG
TTGTATTTGAAATTTGCGAATATTTTTTGTGTGTATATTATTAAAAGTTG
TAAATAGATCAGGAATTGTACGACATTATGTACCTCAAAATATGGTATGA
AATCGTTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049329-exon-scaffold_154-1491911889:358059..359018 | TCONS_00049329-exon-scaffold_154-1491911889:358059..359018 | Clytia hemisphaerica | exon |
| TCONS_00049329-exon-scaffold_154-1510915933:358059..359018 | TCONS_00049329-exon-scaffold_154-1510915933:358059..359018 | Clytia hemisphaerica | exon |
| TCONS_00049329-exon-scaffold_154-1575043694:358059..359018 | TCONS_00049329-exon-scaffold_154-1575043694:358059..359018 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_154 | supercontig | scaffold_154:358059..359018 . |
Blast
The following BLAST results are available for this feature:
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