TCONS_00004907 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004907
Unique NameTCONS_00004907
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2753

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004907 ID=TCONS_00004907|Name=TCONS_00004907|organism=Clytia hemisphaerica|type=transcript|length=2753bp
GTTTGTTTTGGAATTGGAGGTCGGTCGgactcaaaattttttttggaact
gCACAAAACAAACAGACAAACAAACTACTCCTCATCATACTGTCATACTA
ACAACTAAAGGAGCAAAGACATCAGCCATTTAGCATTTATAACATGTCAA
TAATGGAGCAATATTCTTGTGATTGTCTGAATATAATTGCAAACGTTCGT
GGAAAACGAGAGACTTCTGGTCGTGATCtggtttcttttcaaaattttaa
caatGAAGATCAATTTTTCAGTAAAACTCTTCTAGATGTTGATCTTGGTG
TCAGTGGTATTGAAGTTGCTCAAGAGATCTTGACAAAAGAACGAGTGTAT
GGTGATTGGATTGTAAATACATGTTTGAATTGTTCCAGGGATGTTTATTG
TATGCATAGTTCTAAGGGTTTAGAACGTGTTTTACTATCTAATGATTTAG
TGTGTAACAAAGATTTGGAGACTGATATAAAAAGTTCATCAACATTTTCC
AACATATTCAGACTAAAACTTGGCGATTTCAAGTGTCAACCAACTCAAAC
ACTAAGTGCAAAAACTGTTACATCAGTATCAACAAAATTGAATGCTTACG
CAGAGAAGTTACTTGCAACTGAAGAAGAAGCAATGCTTGAGCGAATCagG
TTGTTTACAGAAACACAAGAAATGCAGCTCCATGAATTTAAATTGAACAC
TCAGAAACACAAGGAACAACTGCTAAGGTCAGtaagaaaacatgaaaata
gCCAAATGGACTCTTTATTCGACTCTTTCAACGAGTCATATTTTGGTGAT
CCTAAGCAATCAGAGGAAAGAGATCTATCAACAGATCTACCTAAAATTCA
TAAAGGTAAAAGCATTCCAGCTAAAGGTTCACTGAGTGCCAATTTAGACA
GCAGTAATGTAGCTCAATCTCTGCCCACAACATCCTTCATGCCCCCGTAC
AAATCAAGGAATTATCCAAGTGGTAGCCGTAGAAACAACCGTTCAAGGAG
TTTATCAGAATCTGATGACATCATGTTTGATATTGAAGGGTTTCATGAAG
ACAAAAGTTGTGAACCTTTTTATGAGTCGGATGAAGATGAAAGTGGAGAT
GCAACGAGTCTTGAGAGTAGTGGTGGTTATTCAATCCCTTCATCAGCAAC
CAATCGTGGATTGAATCCTGGTGATCGTGTCTATGCAACCTCAGTCCCAG
TCTCCATCCCATTATTTGAAAATGTGAAGAATTCATATGACCCTGAAAGT
GATGAGGAAGAAGAGGTATACTCTCCATCGCCCAACCATATTGCAGATTC
CATAAAAGCATTGGCAAAGAGCATGCAGGATTCCACTAGTATGTTTGGGG
AGTTGCCACGCCCAAGGTTGAACACTGGAACAAGGAGATAGAAAATTAAA
AGGTTTTTCCANGTATGTTTGGGGAGTTGCCCCGCCCAAGGTTGAACACT
GGAACAAGGAGATAGAAAATTAAAAGGTTTTTCCattatatttttgtata
taGATTTTAAAGGTGTTAgtagattttttaaaagttgaaaaccaacttCA
AGTTAAAGATTTCTTCAGAATTTTACTACATTTCTCTTTAGgtacagttt
gaaaaaaatttatttttatttttactgtaTTTTCAGAGACAATCCAAGGT
ATAGCTCAATTAACCGAGTAATTTGTTCCTTtacctttttattttgtttt
ctattGTTCATTTTTTCGTGTTTGATAGATTTAGTTAATTGTCTTTATTT
ATGTTCTACATATATATTACTGACCAAGGTTtctaaaaaggaaaaacatt
ttcatttttcacaccACAACGACTTTAGCTAAAGTTGCGCACTAAATCAT
CATTCTCAAGCCCTTTTTAAGTCTGCAAATATTTGATCGTCCAATTCCTA
CAATTTTAGGCAACTTATGAATGGAGCTAAGTATGTTGTGGATTTATGTT
TAtgcgttttattttgtttttgtacaGTGCTTTCTTTCCATTTGTATATT
ACTTTTCATCCTAAGTCTCTGTTCTTTAATTTCAGTGTACTACAAAGTTT
GGAATTTCAATTTTGCTGCGCAAGGTGAAATTTCCTTTGTAATTGTAGTG
TCAAAATGTTTAGAATAAGCATTTAGAGTTTCTCTTATAgagtaaatatt
tttgaatcatTGTTATGATAAAATAATAGGATTTGATCTTCTCATATACA
TATTTTTTGCCAGTGTATTTTTTACAGATTATACTTTTACGctactgttt
ttttttacagttcgttttgaaaaaataaaattttaaaaaagaatttattt
ttaaaaagattaggATTTTTACATCACATAACAGATGGTATAAAGTCTAA
CTGAACTTAACGGGCTGGCTTAACTTACTCCATAAAGTTCGGTGATAGTT
AGACTTAAAAAAACGTTATTGTGATCCAAGTCAATTTCATTTAATATCAC
ATCCGTATTATATCAAGTATAGGAACAATTTACATTATATCCATTCCCAA
AGAAATATTCCAGCATTATACTTAGTTTTTGATTATGGTTTAGTTTTCCA
TTTTCTAGTTTGTTGTAGAACTGTAAAACATATATTCCAGGTGTATTATA
GGAAGatgtaaaatattattttttatgaaaatcttttCCTTTTGTATTTC
TTGTTTTGGGTACCCTGAAGGCCACCATCCTGGTAGACTAGATGACGCGA
TATTTTACTGAACTCATCGTCATCAAATGTCACCATAAAAAAACAGAATT
CAT
Run BLAST on NCBI

transcript from alignment at sc0000049:217965..237336-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004907 ID=TCONS_00004907|Name=TCONS_00004907|organism=Clytia hemisphaerica|type=transcript|length=19372bp|location=Sequence derived from alignment at sc0000049:217965..237336- (Clytia hemisphaerica)
GTTTGTTTTGGAATTGGAGGTCGGTCGGACTCAAAATTTTTTTTGGAACT
GCACAAAACAAACAGACAAACAAACTACTCCTCATCATACTGTCATACTA
ACAACTAAAGGAGCAAAGACATCAGCCATTTAGCATTTATAACATGTCAA
TAATGGAGCAATATTCTTGTGATTGTCTGAATATAATTGCAAACGTTCGT
GGAAAACGAGAGACTTCTGGTCGTGATCTGGTTTCTTTTCAAAATTTTAA
CAATGAAGATCAATTTTTCAGTAAAACTCTTCTAGATGTTGATCTTGGTG
TCAGTGGTATTGAAGTTGTAAGTTTTTTTCTATTTTTATTCCTGTCTATC
TTTTCATTGTTCTCATATAATAATCTCTTTTGCTGAACATATACCTTTTG
TGAGAGCAAGGGATACTGTAAGTTGGTCTAATAAGGCAGTTTGGGAAATT
GCATGCATAGATCCTCAACATTGCGAAATTTCGCATTTTTTGCGTTGTCA
TATTCCCTAGCCTATGTACCAAAACCGGCATCGCAGGGCCTGCCCTGGAT
GGACCGGGGTCCCAAAATAATGTGCATTTTGAAGGCCAGAAATCCGCGCT
CGATAGGATCGATCATCGGAACAGCTCGATGACGGATCGATGGTGAAGGC
TTCTTCATAAAGACGAAAGACATGTATCTATTTTTCGAATCCGGTATGCG
GGAATAGTGTCAGGACCTGCAGGCGACCTGGTAGCGTTGGGTATGGGTGT
GGTTACGTATCAGATTGGTTAGGAATTGGGTTATTATCAGTTAGGGTTAG
GAGGGTTGGAGCTCGAAACAAGCACTCTTTTGTAATTTTCTCTTAATCCA
GGCGTAGTTAATCGATATAATCGATAATCTTGAGTAATCGATAAATAATC
GATAAGTAATCGATGGATTAGATATCGATTAACCGATAGAATCGATAGGT
AATCGATACTCAAGATTCAAGATACGCTCGATTATTTATCGATCAATTTT
CTCATCGATTGTTTATCGATTATAGATCGATTATACTTCGATTAAATTAA
GTATCGATTAAAAATCGATCGGCTANNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATCGACGCAGAAATT
TAAGGAAGATTCCAAAAATACAAAAACGAAGCAAGCAAAAGTATTTGTAT
CAAAGGTTATGGCCCTATTGGAGAACTGTCGGTATCTTGACACCTCTACT
ACAACTAGGTCAACCCGGTCAAAATCGAAAAAGAATTATCCACCGTATCA
TACTTGTTTGCCCCTTTTTCGAATTTCCGCTTGCAGAAATATTTGCACCC
CTGTCTTTATCTGATATTCCGATGGCGTATTGGCGGCCGCCCACGCTCAA
GCTCTAAAGGAGCGGACCAATATTTATTTATTTTTTATTTTATTTATTAA
AGGATTTACAGTCCAGGCACACTAGGGCCTCTAAACCGGTTTATCTACAT
AGTGATTACAAAAGTGATCTTGAATCGTAACGTAACGGGTGCTTTATCCA
TGCTTGAGTCAGTTCTTCTTTAAATGCTTTGATTGACTATATACCTAATA
TACAATATATAAAATATGCCCGACCTTCAGAGCAAAGCGTGTCGTAGCAT
ATTTCCACATCTGGTACCAGATAACCCTGTCTCAGAGATGATTTAAGCCA
GGGGATGCGAGACCTCTGAGAGAATGAACAGCATATGAACGAACGGGAAA
TTATATCTTGCTTCATACTGTACCTTGTCTCATTATCAAGCCTTTAGAAA
TAATCCCTTTCGTCAAAGACATTTCCTAGGAAGGACGAGAGATCAAGGCG
TCCATTTCTTTAATAAACGTTCTATCTTATCCTGTTGTAAAGTGTTTGTA
GCCTTACCCTTCCCACTATCTTCTTCTGAAAAATAATACATGACATATAA
ACTGCTAAATTATCACTATACAAAATATACAAAGACGTTGTATTCACATG
AACAATGAGTGACTATTAACATTTGAANTACTCTGAACACTAACAAGCCT
CTTGGGATAGTGTGGGAGTAATTAAAAATGACATGATGACGGCATTTGAT
ATTTCTTGATTATTAAATAATTAACTCCTTTCCATTTCTCGGTTCCGTAT
CACTTAACAACGCCTTCAACTTGGGGCGCAAATGGACGATTCGTGTTTTA
ATGCGAACAATTTTCCGCCCTAACTTTAGAATGAAAATATGAAGAATAGA
CATTGCTTTTTGTTTAGTGAACCAAAGATTGTATACAACTGGCTTTCGTA
GAACACAATGCCAAAGGAATCTTCAATCACGGTCGCTTCATTATTTCTTA
TTCGGTATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGAAAGCGGGTGTTTATTCAA
AGTAATACGATCGGTATGAGATTTGGCGAATTCCAGAAATGTTCTTTACT
TCATTAAATACCTTATCTTGGCCCTTTTTACCCCGGACCTTATTAGCGTT
ATTTTTGGGCTCGTTGGTGGAATAAGGGCCGGCGCAAAAAGGGCCGGTAA
TGTAGTCAATAGTAGGTCACGATCGATATATAATCGATAACGATACGTGA
TCGAAGATAAGTAAATAACTGATAAGTAATCAATGCATGAACGATAAGTA
ATCGATGATTGTTAACAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTATCGGTTAAT
CGATATCTAATCCATCGATTACTTATCGATTATTTATCGATTACTCAAGA
TTATCGATTATATCGATTAACTACGCCTGGCTTAATACAGTCTGGTCTGC
AGTTTGTACAATATAATAAATAGCCGTCAGAAGCGCTATCCTGGCATGAA
TCTGTGGCGCAGTGGATAAGGCAATGGGTTTCAAAACATCGGAACTTTGC
ATTTAGTGGGTTCGAATCCCACCGGTGGCGATCTGTCTGTAAGTCATTCA
GTAAGTTAGAAAACATAGAAAATAACTACGTTTCAAAGGTCTTTGAAAAG
ATTGTACGAGCCAAGATACAGAATCATCTAGAAGAAAACAATCTGTATAA
CAATAATCAACATGGCTTTAGGAAAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAGAAGTATTCAAAAAACACTTAGACACCTTCCT
CACAACTGTTCCGGACGAACCTCTGCTTGCCCACTATTTTAACCTTAGGC
AAGCTGACTCCAACAGTCTCAAAGAAATGTCAAAGCATCGGACTCAACGA
GTTGGATGAGCTGTTCTAGCAAAAGCCAAAAAGAGGTACAAAGAGGTATA
GGTAACTCACAAAGAACCAGAAAGTCAGAAAGACTATGAACAAGAGATGG
AAAGTACGAAATAAGTCCAGATCTGTCTTTCGTCTTTGTGAAGAAGCCAC
AACCGTGATCGATGGATTACTTAACGATCCGGATAGGATATCGATAGAGG
ATCGATACTCAAGATTTCTTTAAGCTTATGATTAGTTATCGATTATTTAT
CGATCTATCATCAATCTTTTATCGATCTTATCGACCCTATCGTAGCCATT
CCAGGGTCAAATTGAAACTATTCTGGTGGCAATCAAACCTAGTTCATCTT
GTAGAGCTTCAAAAAAGAAAAGAAATGAGGGGTCATACACCTCCTAATAA
TAAGCGGTTCCGGAGATTTTGGTTCTGCTAAAATAGCACCTTTTTAGACA
TTTGAAGTTGACAATTTAGCCCAGAAATGGCATATAAAATGGCACCGAAA
TATGCTGCAAAAATTGAAAATTCAAGCTTTTGTATTGAGTCAAGATATTC
CAGATATCTTCATTTTGACTGCAGACTTTTATCAAATTCTTTTTGTTAAT
TCCTGCGATAATGGAATTATTATGTATACGTTTTTGAGCTGTGATAAAAG
GGATATGTCCGAAATATAATGTACTATCAAATGAAGCTAAGATAATGAAA
GAGAGCAACACAAGAAATGACACAGTGTGAATTTGAGTATCGAAAATATA
TTGAAAACACGAATAGAGTAACATACGTATAACGCGAAGCTGACGGGTTT
TGGGGTAACATTGGGGTTGTGCCAAGACTAATTGATGAGAACTGAGAGAA
CATGAAATCATCCAGTTACGAAGTAACCCAGATTAGCCCCAGTGCAGCCC
CAAGTACCGTCAAACTCAACTATTTTAATATTTTGTCACACGGGTCCCAA
ACTGAAGTCGTAGAAGTCACTTTAGCCATGGCTCGCTGGAACTTTTCAAT
CAAATCGTCTGAAACTCTGAGATAGCGAATGTAGCAGTCACTTGACCACC
TGCCTAAAATTTTAATCAGTGCATCAGAGGCGCCGGCGGATAGTGCAGCA
GAGGCATCTCCAATCTGAAAACTATGTGAAGAAATATTGTGAATATTAGA
TAGTGCGTTTTTGAGCAATTTGTTGATATGTCTCCTAGTGAGAAGACGTC
CGTCGCTAAATCGAAATAAAGGCAAGTCAGCAATTGGTAAGCTTCTAAAA
TAAGCCAGCATGGCCCGTACCGGGCAAAATAGGGTGGGGATAGCGCTAAT
GCGGATGACCGTGCCAATTCGGAAGGGATCTGTTTTACTTCCTTTGAGAC
GCAAAAACATGATAGTGCGTTGAAGATTGAAAGAAATATCACTTTGTAAC
AGGTGTAGGGTAGAGTCATACCGAGTCTGAGTTGGAGATGTATATTCTGA
AACTCTCAACAGGCCATAGAACGCTGTGTGGATAGCTGCCATGTACATAA
GCTTATCTACGAAGGGCATATTAGATGTACGTATAAAAGTGATGATTATT
GTCATATGCTGGATGGTGATGGGTGTACGTGGTTTCTTTCTAAGGGAATT
ACCCTGAACCCGACGAATGCCCCTAAGGGTGCGAAATAAGATAGGGAAGT
GAGCCAGAGTGTGATGATAACCAAGTAGTATATTTTGATGTAGAACTCCA
AAAAGGTAGACTTTAATAGTACCATAAGATATGCGACGATTTGCTTCAGC
CGTAACAAAATAGCAAAGTGAAGCTTCAGTAATAGGAAACGAACAGATAC
CTATAGAGCCACAAAAACGCAAATAAGAAGAAACACCAGAAAGGTACGTG
CTCGTAGTAGACTGTGCCAGGGATTGGTCTAAGTATCCTGCCAGAGATTT
CCCAAGATGTCCAAAGCGACTGAGGCACCGGTGTGGGAGAAGCATCTGCT
GAAGGGCAAATTGAGAGAAAACGCTCTACCTGTAAACGAGAAAGATGGTC
TGCATAAGGATTTAACACTCCAGGAACGTGCTTGAAGACGATAGACAAAT
TCAAACTGGTACAGAGAAAAAACAAAGCCCTAACCAAAGCCATGATCGGT
TTGTCTCGTGTAGAACCAGAAGCCCAGATAGCCACAATAGCCTCATTGTC
TGTAAAAATGATGATGTACTTGTTAACCAGAGCCGAAGACCAGCACGAGA
TGGCTGTGAAAACTGCAAAAAGTTCCAAAAGAGCAACATTAATACCCACA
GTGCTAAAAGGCCAAGCCACTGAGACCCAAGCTCCCTGAAAAAAGGCACC
TAAACCAAGCCCTGAAGCATCAGTGAATAGATCAAAGTCGGGAGAAGAAA
TAGCGCGATCTTGAAAGAGGGCAGAGCCATTCCAGGAATCTAGAAAGACA
AACCACATGGCTAAATCCTTACGGATAGAAGATGAGATGTCAATGTGATG
GTGAAGAGACTTGACCGAATGAGCTAAATCAATCATGCGACGAAGAAAGA
TTCTACCTGGTCGAATCACACGGCAGGCAAAAGATAAAGACCCAATTAGA
GAGAGCAATTCCCTTTTGGTGCACTTGCGTCTGGATGACCACAAGATAAC
CAAACCTTTGAGTTCCAGAAGCTTTGTGGGGGGGACCCTTAACAAGCAAG
CCTGTATTCAATATGGCGAATGGAAAGGCGAAAAGGTCTATTCAATTGCG
TTCGATTGCGTTCGATTGCGTTCAATTGAGATCGTCTGGAGTTGATTGTC
TATTTTTTACTGCCATCTTTATTTTGACGGTTAGAAAGTAGTATGGTCCG
ATCAACAATACGTCTGAACCGGGCGACGTTTCCCAACAACAACGACAATC
GAACCAGTCGAACAACAATCGAACCAGTCGAACAACAATCGAACCAGTCG
AACAACAATCGAACCAATCAAATATTACCCAGAATTTTGACATTCGATTG
AGATTCGATTGCATTTGACACTGGTTCGATTGTCGATTCCATTCGATTAA
GATCGTCTGGACATATCGATTCTTCCCATGAAGAACCCCCCCACCCCACC
TCTTAACGTCCTAGTTTAAACAGTCCGTCATAGTGCCTTACAAAAGTTGT
CTTTTTGATTTTCCAAACATTCGTCTCAAGCGTTCACTTCCACAATAATT
TATGTAAATTTCAATTTCTGTCAGTCCACAGTCAGGTTCAACATAATATA
CGTGTGTTTTTATTCACATGACCGAAGTGCCTACTAAGACAATCCGGGGA
TAAGTGGCGAAGCAAAATAGCAGATTATTCCTAAAGTAAATAAATATATT
TCATTATATTTCCTTAATTCAAAAATCAAAAATTCATTTTATGATCGCAA
AAAAGTAAAAAAATGAATTAATATTACATAATAAAGCTCCCCCGTCTTTT
ACTCTCGTCTAATTTCCCATCTCGGGACATGCAAAACACCCGTCCGCCTA
ATATCCACCCAATCATCTTAAATTCACTTTAATTGTGCTTTGACTTTCGA
AAAATAGTATTCAAAAACTATGAATTTATAATAATTACAAAAAACAAAAA
GTTCGATACTTCATCAGTGAAATATTCAATAAAATTCTAGTTTCAATTTT
CAGTGGGCGTTATTCTAGCGCTTTGTTGATCGCGCAATTTTTGCGTCACA
CCAACTTTCTCGGCCACTCGTAATAATTATGCATTGCCAAATTTGGTTCC
CATTGTGAAGTCAGGATCAATGGTGATGTCACCTAAGCATAAAAAAGAAA
GGATTTTGTCAGTTTTATGCATATATCAATTTGCGAGATATTCTATTCGC
CGCACGAGCGCACTTTTCGTAGACTAGTCGGAATACCTTCTTTTACTCAC
GGGGTTGATGATAACTGTTCATCTTCGTTATTTTTAAAATGAAGCACAAC
CGAGAAAAAACGAAGCTTCAAAAAGTTGCGTATTTCCAGTGAGTATTAAA
CGATAACGAAATTGATGATGATGATGATTTTTTTTCAGTCAGGCAATTGT
GATGCACTGTTAAAAATTATCAAAAATCTATGAAACTCTAAATTTTCTCC
TTCACTTTCATTGTTGTTTTGTCAGCCATCTTCAATTGGGCCATTCCAGA
ATTTGTCTGTAACAGGGGGCAGACGACACAGGATTTCCGAGGGCAAAATT
ATTTTACCAAAATTCGAAATTTCCAAGGCAAGTAAAAAATGTATGAATTT
CCAAGGCAATTGAATTAAAAAGCCAAAAAAGAGTGGAATTTCTGATGCAT
TTTGCAAAATTACATGGATTTTCATAGGAATTTCCGACCACCACTGGAAA
AGAAGGATTATTTCCAAGGCTAGAAAAAATTAAAAAATGCACGTCGTCTG
ACAGGGGTAACAAAAATTTTCTGGAATGGCCCATTTCGCTATGGCTTGAT
GCTCGGTGTTTACATTTTAAAAATAATGGAGATGATTTCTAAACTTTTTT
TCGGAAAGTTGCCAGAATTAATTATCTCCTTAATCATAATCAACAGAATA
GCAACATTTCACAAAAAAAAGACAGACCTTCTGTGAAATTCAAGGGCTAC
GCGGACCATCTAAACAAAAGAATACGAGACATAAACATCAGGCCGTTTGT
TTTTGTTCTATAAAATAGCAAAGCGAACAAATACAGAATTCGGGCCCTCG
GATGATCTCACATAGCAGCATCACTAGTACGGTAGCAGCGTACCTCAGAC
CTTCAGTCACCTTGACTTACTTCTATTTACTGAAACCCCTGCCTGTCTGA
ACTTGTAAAAATTATTTTATATTCTAGGCTCAAGAGATCTTGACAAAAGA
ACGAGTGTATGGTGATTGGATTGTAAATACATGTTTGAATTGTTCCAGGG
ATGTTTATTGTATGCATAGTTCTAAGGGTTTAGAACGTGTTTTACTATCT
AATGATTTAGTGGTAAGTTGCATTACTAAAAGTGTTGAACTTGATTCGTG
TATAGATCTCTCTTTTACTTTAAGAAAAAAGTCTTTAAACCTTTAATAAA
GTTCAATTTTGAAAGAGATTTTGTGCTTGTTAGTAACTTAATCAGGATCG
AAATATTATCAATCAAATACTGTAGAAAAGATTTAGAAATCATTTAAAAA
TAGAGAAAACAAAATGAAAGAATTTAGCTTTATGCTAGGATCAAGTTTCA
ACTCGAACGTCGAAGCATCTTTAATTTTAGAACCAATGTGAAATAATTTT
AAAAAAATATTCAGTTAAAAAATACAGCTTAAAACTTTTTTCTGGCTGAC
TAAAATGTTTTTGTGATTTGTTTAATTATGCCTTGCTTTGTGATGATAAA
CATCTCGATAATAATCTTTGGGATATAACTTTCCATTTAATTATATTTTT
GAAAAACAGTGACGTTTTTCTAAGATCAAAGAATAAAGTGTGTGAAAAGT
GGAATCACAACGCTGTTCTTCAAGAAGTTTGTTTTTCAGGGTCAGCACAG
CATTAATTCAAATTGTATATTGTGTTTTAAAGAATTTGATACACTTTCCA
AATAACATCTTTGTTTCTCTGTTTTAGTGTAACAAAGATTTGGAGACTGA
TATAAAAAGTTCATCAACATTTTCCAACATATTCAGACTAAAACTTGGCG
ATTTCAAGTGTCAACCAAGTAAGTCCCTAGAATTTTTGAATTGAAGAATT
GTTCCATAAAAGTCTGGCTGTTCAATTCTATTCATTTGTAAGTTGAAATG
GAAGTTTTCCTAATTACCTTTTTATCATGGTTATGGTGGTAGAAACTCAA
TTTGAATTTCAGTTTGTAAACTCAATTTTGTGAAATGAACTGAAGCAGAA
TAAGCAGCAAATGGTAAAACCCTAAGATTTGAAGATTTTCCATTTAAGTA
AGGTTTTTTCAGGGTAAAAGATGTGTGAAAAACAGCCTTCTATGGTGGGA
CTTTTAATGTTGGGAGAGAAAAATACTTGGAACCCTTCAATGAGAGTATA
TGAAAAATAACTACAGGTTTTTAATCTCATTTTTAGCTCAAACACTAAGT
GCAAAAACTGTTACATCAGTATCAACAAAATTGAATGCTTACGCAGAGAA
GTTACTTGCAACTGAAGAAGAAGCAATGCTTGAGCGAATCAGGTTTTTAG
ATTTTTTCCCTTCCTTTTTGGACCTTCCTTAAGGTAGTCCTTTAAATTAA
CCCTTGTCCGTTCGTCCGTCTGTTGCCAGCTTTTCTCGGGATTGGCTCAT
TAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAA
TGTGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAACTGG
TTTTTTGGCACTTTCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTTG
CTCAAAGATGCGTATTAACAATGCCCAAAACATGACCGAGTCCGATTTTT
GAGAAAAAATTTTTCCAGAAATATGCCGGAAATTGCCGTTTTTCTGGATT
TTCATTGGACTTCTTCCTTATAATTGGTTGTTTTTTCATTCCAAAAAATT
ATTAATAGCAATGCCCACCATCAAGTATGTTCCAATTTTCAATGAAATTG
ATTTTTAAAGCCGGAACTATTCAAAAATCGCCAGGCCAACTTATTTTCGC
CGGAAAGACAGTATTTCTTGAATTTCTTGAGCTCTACCTTATATTTTTTT
ATGAAATTTTGCACACTGATGCAAAATGACAATACCATTTTATTCCGGCC
GGAAATATGCTGGAAAAACCGGTTTTTTGACATTTTCTCGAATTTTCATC
CTTGTTTTTCTCTGATTTTTTGCGAATGATGCGTATTGGCGTATTCGCAA
TGCTCAAAACATGACCGAGTTCGATTTTTGAGAAAATGTTTTTTCCGGCC
AAAAAAGCTGGAAATTTCCGTTTTTGCAGATTTTCATTGGATTTTTTCGT
TTCATGTCTTTGTTTTTTTCAAACAAAAATATAATTTATAAGAGAATGTC
CGCGATTAAGCATGGTTCAATTTTCAATGAAATGATTTTGGTACAGGAAC
TTTCTAAAAATCGCCAGAACAGCCGAGAATTGCCGGATTCCATGAATTTC
TCGAGTTGCTCTCGTATTATTCTGCATTTTCATACTATTGTTCTCATTTT
TCAATTGTCTTATTATATCAATCTTCAGGTGGTCCATTCAGCATGTAGCT
TGTTTCAATTGTTATATTCTTTGAAGTCAGTTGTTTTTTCTTGATTAAGT
CTTTACTTGTCATTTTAGTTATCTTTGAATTATTTCGATGTATTTTCCTA
TGTGTGACATAGCTACCACTACCTTTGAATAAGCTTAGATGCTGAATAAG
TTGATAAGATAAGTTTTAACAGTATTTGTTTAAAACCTTTCCCTTTATTT
AAAATTTTCCAGACATGGTTAATTTAAATTTTTCTCTTTGATTTAGTTGT
TGGTGGCCTGCCTGTTGTTTATACCTTTTTATACCATGTGAAAAGAAAAG
GCTAAACCAAATCCTATCTTTCAGGTTGTTTACAGAAACACAAGAAATGC
AGCTCCATGAATTTAAATTGAACACTCAGAAACACAAGGAACAACTGCTA
AGGTATCAATTATAATTTTTTACATTCTCTTTGATTTTTCAAAAGTAGCA
TACATTGTCATCAGAAAATATTTTGACTTATCTGGAGTTCACATAATTTT
AACTATGTTCGTTATTAGCTAGCTCCCTGCTTTCCATGTGATTGGCTCAT
AGAGTTTTTTTTCTGACTTTTTACACAAAGATATCACCATAATAAACCCT
CTTATCTAGCAGCCCCTTATTTTCAAATAAAAATTTCACCAAACATCAGC
TGGTTGTTCAATTTTTCCTGATGTTTATTATAGATCAAATTCTTTTCAAG
AATTTAATGCTTTATAAGAGGTGTTTTTACTGACTCAAGGGTTGACAATT
TTCTATATTTTAAGAAAGGAATGATATTTCACTTTGATTAAACAGATTGG
TCCGTAAAAGTAAAGTATCTAATCACTTCTTTCTTTTTATTTTATCGGCT
TTTATTATACATAAGTTTGTTGAAATTTAGTGAGTTGTTAAAGAGATTCT
GTCTTGAAATTTCAGGTCAGTAAGAAAACATGAAAATAGCCAAATGGACT
CTTTATTCGACTCTTTCAACGAGTCATATTTTGGTGATCCTAAGCAATCA
GAGGAAAGAGATCTATCAACAGATCTACCTAAAATTCATAAAGGTACAAT
TCAAATTATTACTGGGATTTTTTGAATGACCATTTTGCTTGATAATTTAC
AAATGATACATATTATTTTCCCCTTTTCCTTAAAAAAGTGATATGATACA
GGCTCTTTGGACTTTCTATTAAGACTCATGCATATACCTTTTTGCTAAAA
AATGATAAAGAAATGTTCTTGGGTGTTAAGATCACTATGATAAATTATCT
ATCATCGGATCTACCTAAAATTCACAAAGGTACAAACAGGTACAAATAAA
ACTNTTTCTCTTTGATTTTTCAAAAGCAGCATACATTGTCATCAGAAAAT
ATTTTGACTTATCTGGAGTTCACATAATTTTAACTCTGTTCGTTATTAGC
TAGCTCCCTCCTTTCCATGTGATTGGCTCATAGAGTTTTTTTTCTGACTT
TTTTCACAAAGATATCACCATAATAAACCCTCTTATCTAGCAGCCCCTTA
TTTTCAAATAAAAATTTCACCAAACATCAGCTGGTTGTTCAATTTTTCCT
GATGTTTATTATAGATCAAATTCTTTTCAAGAATTTAATGCTTTATAAGA
GGTGTTTTTACTGACTCAAGGGTTGACAATTTTCTATATTTTAAGAAAGG
AATGATATTTCACTTTGATTAAACAGATTGGTCCGTAAAAGTAAAGTATC
TAATCACTTCTTTCTTTTTATTTTATCGGCTTTTATTATACATAAGTTTG
TTGAAATTTAGTGAGTTGTTAAAGAGATTCTGTCTTGAAATTTCAGGTCA
GTAAGAAAACATGAAAATAGCCAAATGGACTCTTTATTCGACTCTTTCAA
CGAGTCATATTTTGGTGATCCTAAGCAATCAGAGGAAAGAGATCTATCAA
CAGATCTACCTAAAATTCATAAAGGTACAATTCAAATTATTACTGGGATT
TTTTGAATGACCATTTTGCTTGATAATTTACAAATGATTCATATTATTTT
CCCCTTTTCCTTAAAAAAGTGATATGATACAGGCTCTTTGGACTTTCTAT
TAAGACTCGTGCATATACCTTTTTGCTAAAAAATGATAAAGGAATGTTCT
TGGGTGTTAAGATCACTATGATAAATTATCTATCATCGGATCTACCTAAA
ATTCACAAAGGTACAAACAGGTACAAATAAAACTTTTACTGGGGATTTTG
TTAATGACCATTTGTCGTGAAAATTTAGATATTATAAATAATATTTTCCC
TTTTTCCCTTACAAAGTGTATAACTTTTGTGCTCTCAATGGAAAGTTGGA
AAGTACAAAAACCCATACACAAAGGATGTTTGGGTGTTTTGTTTTGAAAA
AGATTCACCCATGTTATACAAAATAAGTATACAATTTTGATAACCATCCA
TTTGTTACTCTAGGTAAAAGCATTCCAGCTAAAGGTTCACTGAGTGCCAA
TTTAGACAGCAGTAATGTAGCTCAATCTCTGCCCACAACATCCTTCATGC
CCCCGTACAAATCAAGGAATTATCCAAGTGGTAGCCGTAGAAACAACCGT
TCAAGGAGTTTATCAGAATCTGATGACATCATGTTTGATATTGAAGGGTT
TCATGAAGACAAAAGTTGTGAACCTTTTTATGAGTCGGATGAAGATGAAA
GTGGTATGTTAAATTGATGTTTTGAGTTTACTACTATCTTTTACAATCTA
CCAATATAAAATCAATTTTTTGGAAAGTATTTACAATAATTATTTCTATC
AACAAGCTCATACATGTTTTTTATAAGCATACAAAAATCCAAAAACTGGC
TCGGAGAAGTTGTAGGGAAATTCCAAAAATCCGTAAAATCCCAGCGAAAA
ATAACCAAGATCAGAAAATATAGGCTGAGCTAAACGTTTAGCATATGCTT
AAATTTTTGCCATATCTGCATTTATTTACTAATCTTTTTGAAAGAAGCCT
TTTAGTATAACATCGACCCAATTTCTTTTACTTGTAGGAGATGCAACGAG
TCTTGAGAGTAGTGGTGGTTATTCAATCCCTTCATCAGCAACCAATCGTG
GATTGAATCCTGGTGATCGTGTCTATGCAACCTCAGTCCCAGTCTCCATC
CCATTATTTGAAAATGTGAAGAATTCATATGACCCTGAAAGTGATGAGGA
AGAAGAGGTTTGATTTTATTCTGAATTTTCATTTTCATCTTGCCCTGATG
GTCATTTTGCAAAAATTCATCCGTTAAATACTGATAGCTTTTTTTAACGG
TGATAATATGGATTTAAAATCTCTTAAAGTACGTAAAAGTTACAGAAAGC
AAAATTTTACTATAGCCTAACAATCGTTTTTGTTTTCAAGCGGTAATATT
TACAACAATTTTATTTTTTTTATTTCATTCCCAGGTATACTCTCCATCGC
CCAACCATATTGCAGATTCCATAAAAGCATTGGCAAAGAGCATGCAGGAT
TCCACTAGTATGTTTGGGGAGTTGCCACGCCCAAGGTTGAACACTGGAAC
AAGGAGATAGAAAATTAAAAGGTTTTTCCANGTATGTTTGGGGAGTTGCC
CCGCCCAAGGTTGAACACTGGAACAAGGAGATAGAAAATTAAAAGGTTTT
TCCATTATATTTTTGTATATAGATTTTAAAGGTGTTAGTAGATTTTTTAA
AAGTTGAAAACCAACTTCAAGTTAAAGATTTCTTCAGAATTTTACTACAT
TTCTCTTTAGGTACAGTTTGAAAAAAATTTATTTTTATTTTTACTGTATT
TTCAGAGACAATCCAAGGTATAGCTCAATTAACCGAGTAATTTGTTCCTT
TACCTTTTTATTTTGTTTTCTATTGTTCATTTTTTCGTGTTTGATAGATT
TAGTTAATTGTCTTTATTTATGTTCTACATATATATTACTGACCAAGGTT
TCTAAAAAGGAAAAACATTTTCATTTTTCACACCACAACGACTTTAGCTA
AAGTTGCGCACTAAATCATCATTCTCAAGCCCTTTTTAAGTCTGCAAATA
TTTGATCGTCCAATTCCTACAATTTTAGGCAACTTATGAATGGAGCTAAG
TATGTTGTGGATTTATGTTTATGCGTTTTATTTTGTTTTTGTACAGTGCT
TTCTTTCCATTTGTATATTACTTTTCATCCTAAGTCTCTGTTCTTTAATT
TCAGTGTACTACAAAGTTTGGAATTTCAATTTTGCTGCGCAAGGTGAAAT
TTCCTTTGTAATTGTAGTGTCAAAATGTTTAGAATAAGCATTTAGAGTTT
CTCTTATAGAGTAAATATTTTTGAATCATTGTTATGATAAAATAATAGGA
TTTGATCTTCTCATATACATATTTTTTGCCAGTGTATTTTTTACAGATTA
TACTTTTACGCTACTGTTTTTTTTTACAGTTCGTTTTGAAAAAATAAAAT
TTTAAAAAAGAATTTATTTTTAAAAAGATTAGGATTTTTACATCACATAA
CAGATGGTATAAAGTCTAACTGAACTTAACGGGCTGGCTTAACTTACTCC
ATAAAGTTCGGTGATAGTTAGACTTAAAAAAACGTTATTGTGATCCAAGT
CAATTTCATTTAATATCACATCCGTATTATATCAAGTATAGGAACAATTT
ACATTATATCCATTCCCAAAGAAATATTCCAGCATTATACTTAGTTTTTG
ATTATGGTTTAGTTTTCCATTTTCTAGTTTGTTGTAGAACTGTAAAACAT
ATATTCCAGGTGTATTATAGGAAGATGTAAAATATTATTTTTTATGAAAA
TCTTTTCCTTTTGTATTTCTTGTTTTGGGTACCCTGAAGGCCACCATCCT
GGTAGACTAGATGACGCGATATTTTACTGAACTCATCGTCATCAAATGTC
ACCATAAAAAAACAGAATTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002776XLOC_002776Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004907-exon-sc0000049-1575043694:237020..237336TCONS_00004907-exon-sc0000049-1575043694:237020..237336Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:225125..225259TCONS_00004907-exon-sc0000049-1575043694:225125..225259Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:224419..224509TCONS_00004907-exon-sc0000049-1575043694:224419..224509Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:223945..224050TCONS_00004907-exon-sc0000049-1575043694:223945..224050Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:222435..222512TCONS_00004907-exon-sc0000049-1575043694:222435..222512Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:221794..221921TCONS_00004907-exon-sc0000049-1575043694:221794..221921Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:220184..220423TCONS_00004907-exon-sc0000049-1575043694:220184..220423Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:219680..219849TCONS_00004907-exon-sc0000049-1575043694:219680..219849Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1575043694:217965..219452TCONS_00004907-exon-sc0000049-1575043694:217965..219452Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:237020..237336TCONS_00004907-exon-sc0000049-1510915933:237020..237336Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:225125..225259TCONS_00004907-exon-sc0000049-1510915933:225125..225259Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:224419..224509TCONS_00004907-exon-sc0000049-1510915933:224419..224509Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:223945..224050TCONS_00004907-exon-sc0000049-1510915933:223945..224050Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:222435..222512TCONS_00004907-exon-sc0000049-1510915933:222435..222512Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:221794..221921TCONS_00004907-exon-sc0000049-1510915933:221794..221921Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:220184..220423TCONS_00004907-exon-sc0000049-1510915933:220184..220423Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:219680..219849TCONS_00004907-exon-sc0000049-1510915933:219680..219849Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1510915933:217965..219452TCONS_00004907-exon-sc0000049-1510915933:217965..219452Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:237020..237336TCONS_00004907-exon-sc0000049-1491911889:237020..237336Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:225125..225259TCONS_00004907-exon-sc0000049-1491911889:225125..225259Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:224419..224509TCONS_00004907-exon-sc0000049-1491911889:224419..224509Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:223945..224050TCONS_00004907-exon-sc0000049-1491911889:223945..224050Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:222435..222512TCONS_00004907-exon-sc0000049-1491911889:222435..222512Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:221794..221921TCONS_00004907-exon-sc0000049-1491911889:221794..221921Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:220184..220423TCONS_00004907-exon-sc0000049-1491911889:220184..220423Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:219680..219849TCONS_00004907-exon-sc0000049-1491911889:219680..219849Clytia hemisphaericaexon
TCONS_00004907-exon-sc0000049-1491911889:217965..219452TCONS_00004907-exon-sc0000049-1491911889:217965..219452Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:217965..237336 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.48655	3.80937	7.86544	6.57684	7.2464	6.69207	8.48987	8.33548	5.50557	5.16483	5.50253	10.8496	7.43101	7.20999	7.61564	11.7633	10.6763	5.80658	5.54548	4.43041	10.4291	9.20943	4.78978	7.32201	10.1483	11.7246	4.84094	3.51495	2.99461	3.64683
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004907 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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