TCONS_00049563 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049563
Unique NameTCONS_00049563
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049563 ID=TCONS_00049563|Name=TCONS_00049563|organism=Clytia hemisphaerica|type=transcript|length=124bp
GAGAATGGTATGATATTTCGGGAAATTTGCAATCGTTATCCTAATGCAGC
TTGTGGGTGTGTGAATATAGAAGAATGGGTAACCTCCTTAGGAAGTGACA
TTTGGAGAAGGGATAAAATTAAAA
Run BLAST on NCBI

transcript from alignment at scaffold_160:265151..265274

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049563 ID=TCONS_00049563|Name=TCONS_00049563|organism=Clytia hemisphaerica|type=transcript|length=124bp|location=Sequence derived from alignment at scaffold_160:265151..265274 (Clytia hemisphaerica)
TTTTAATTTTATCCCTTCTCCAAATGTCACTTCCTAAGGAGGTTACCCAT
TCTTCTATATTCACACACCCACAAGCTGCATTAGGATAACGATTGCAAAT
TTCCCGAAATATCATACCATTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031434XLOC_031434Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049563-exon-scaffold_160-1491911889:265151..265274TCONS_00049563-exon-scaffold_160-1491911889:265151..265274Clytia hemisphaericaexon
TCONS_00049563-exon-scaffold_160-1510915933:265151..265274TCONS_00049563-exon-scaffold_160-1510915933:265151..265274Clytia hemisphaericaexon
TCONS_00049563-exon-scaffold_160-1575043694:265151..265274TCONS_00049563-exon-scaffold_160-1575043694:265151..265274Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_160supercontigscaffold_160:265151..265274 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049563 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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