TCONS_00004919 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004919
Unique NameTCONS_00004919
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004919 ID=TCONS_00004919|Name=TCONS_00004919|organism=Clytia hemisphaerica|type=transcript|length=2229bp
attatttacaaaaagatttatcTAAAGGACTATAAAGATAGATTTAAGGA
AAGTAGtgcaacttttttttcttttcggaTGAAAATAATCATCTTTGCAT
TTTAACTAGACGGTGTTCCTAATTTCCACGACAGAGGCTAGtgaaaacaa
acttcaaacAAGATGGCGGCCATAAAACAcgattttcaaggaaaatctaA
CAAATCTTCAACTACTGCACAGGTACCAGGCGTTTTCACTCCCGAGATAT
TGAAGTCTGTCGTTGAATCTGTTGGCTACGATAAGCCTGCAGACGAAGCC
TTACAATACCTTTCTGAGAACTTAACATTTGTCATCAAAGAAACCATTCA
AGAAGCaaccaaatttcgaaataaATCAAAGCGTAAAATGCTTTCTCCTG
CTGATATTGATCACGCATTGAAAGTAAGAAATATCGAACCAGTTTATGGA
TTTACAAACAAACACTATGTTCCTTTTCGACATGCGAGTGGTGGGGGGAG
AGAGATATATTTTCAAGAAGATGTTGATATTGATTTAGAAGATCTAATGA
GCCAGTCCCTTCCAAAGGCTCCTCTTGAAATAACATTGAAATCACATTGG
TTGGCTATTGATGGAATTCAGCCATCAATCCCAGAGAATCCTCCNTCTTT
TCGGATGAAAATAATCATCTTTGCATTTTAACTAGACGGTGTTCCTAATT
TCCACGACAGAGGCTAGtgaaaacaaacttcaaacAAGATGGCGGCCATA
AAACAcgattttcaaggaaaatctaACAAATCTTCAACTACTGCACAGGT
ACCAGGCGTTTTTACTTCCGAGATATTGAAGTCTGTCGTTGAATCTGTTG
GCTACGATAAGCCTGCAGACGAAGCCTTACAATACCTTTCTGAGAACTTA
ACATTTGTCATCAAAGAAACCATTCAAGAAGCaaccaaatttcgaaataa
ATCAAAGCGTAAAATGCTTTCTCCTGCTGATATTGATCACGCATTGAAAG
TAAGAAATATCGAACCAGTTTATGGATTTACAAACAAACACTATGTTCCT
TTTCGACATGCGAGTGGTGGGGGGAGAGAGATATATTTTCAAGAAGATGT
TGATATTGATTTAGAGGATCTAATGAGTCAGTCCCTTCCAAAGGCTCCTC
TTGAAATAACATTGAAATCACATTGGTTGGCTATTGATGGAATTCAGCCA
TCAATCCCAGAGAATCCTCCTCCTATCAAAAAGGAAATGCAACTAAATGA
AGTTGTGAGTCCATTCTCAAAAAGCAGGCATATAAAAGAAGTTGGTGTTG
ACAAAGTTGGTTCACTCAATAAAAACTCAACAAAAGAAGGAAAGAAAGAG
TCAAAAAGTGACAAACGAAAAGCAGAAGAGTTGAAAAAGATAGCAGATGA
AAAGGCTGACTCTCAAAAGTGCAAACCACTGGTAACTCATGAACTTTCAG
TTGAACAGCAAATGTATTATAAAGAGCTTACTGAAGCAAGTGTTGGATCT
ATTGAGACAAAACGAACTGAGGCATTACAAAGCCTTTCCAATGATCCAGG
ATTGTATCAACTTCTCCCGCGATTTATCACTTTCATCAGTGAGGGAGTTC
GTGTGAATGTTGCTCAACATAATCTTGCCATCTTAATTTATCTATTAAGA
ATGATTAAATCTCTCTTGGAAAACTCTACACTTTATCTGGAAAAATATCT
TCATGAAGTCATTCCTGCTGTGATGACCTGTATTGTAAGCAAGCAACTCT
GTCCAAGGCCTGATTTTGATAACCACTGGGCTCTAAGAGATTTTGCTGCA
CGATTAATGGCACAAATCTGCAAACATTTCAACACTCCAACAAATAATAT
ACAACCAAGAATCACAAAATCTTTATCACTTTCACTCGACATGGAAAAAG
CTCCACTTTCAACCCACTATGGTGCCTTAGCAGGGCTGTCAGAACTTGGA
TTTGAGGTGATCAAGAGTATCGTGTTGCCAAGAATCAAGAGCGAGAGCGG
TTTGATAAAAGAAGCCATTAATGGAAACAACAGTGCTGAGAAGAAAGCTG
CTGAACATTTGCAAGCTCTTCTTGTCAAGCATTGCACACCCGTTATTTTC
AAAACCCTTTCTCATGGTGTGGTGGAAACGCAAGAACAATTTGTTGACAA
ATTTGGGTTCGTTGGAAACCTCATTTTTCAGAAAGTGAATCAAATGAAAC
TAACTTCTTTGAACAGACAGCAAATCTNN
Run BLAST on NCBI

protein sequence of TCONS_00004919-protein

>TCONS_00004919-protein ID=TCONS_00004919-protein|Name=TCONS_00004919-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MAAIKHDFQGKSNKSSTTAQVPGVFTSEILKSVVESVGYDKPADEALQYL
SENLTFVIKETIQEATKFRNKSKRKMLSPADIDHALKVRNIEPVYGFTNK
HYVPFRHASGGGREIYFQEDVDIDLEDLMSQSLPKAPLEITLKSHWLAID
GIQPSIPENPPPIKKEMQLNEVVSPFSKSRHIKEVGVDKVGSLNKNSTKE
GKKESKSDKRKAEELKKIADEKADSQKCKPLVTHELSVEQQMYYKELTEA
SVGSIETKRTEALQSLSNDPGLYQLLPRFITFISEGVRVNVAQHNLAILI
YLLRMIKSLLENSTLYLEKYLHEVIPAVMTCIVSKQLCPRPDFDNHWALR
DFAARLMAQICKHFNTPTNNIQPRITKSLSLSLDMEKAPLSTHYGALAGL
SELGFEVIKSIVLPRIKSESGLIKEAINGNNSAEKKAAEHLQALLVKHCT
PVIFKTLSHGVVETQEQFVDKFGFVGNLIFQKVNQMKLTSLNRQQIX
Run BLAST on NCBI

transcript from alignment at sc0000049:543912..546820-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004919 ID=TCONS_00004919|Name=TCONS_00004919|organism=Clytia hemisphaerica|type=transcript|length=2909bp|location=Sequence derived from alignment at sc0000049:543912..546820- (Clytia hemisphaerica)
ATTATTTACAAAAAGATTTATCTAAAGGACTATAAAGATAGATTTAAGGA
AAGTAGTGCAACTTTTTTTTCTTTTCGGATGAAAATAATCATCTTTGCAT
TTTAACTAGACGGTGTTCCTAATTTCCACGACAGAGGCTAGTGAAAACAA
ACTTCAAACAAGATGGCGGCCATAAAACACGATTTTCAAGGAAAATCTAA
CAAATCTTCAACTACTGCACAGGTACCAGGCGTTTTCACTCCCGAGATAT
TGAAGTCTGTCGTTGAATCTGTTGGCTACGATAAGCCTGCAGACGAAGCC
TTACAATACCTTTCTGAGAACTTAACATTTGTCATCAAAGAAACCATTCA
AGAAGCAACCAAATTTCGAAATAAATCAAAGCGTAAAATGCTTTCTCCTG
CTGATATTGATCACGCATTGAAAGTAAGAAATATCGAACCAGTTTATGGA
TTTACAAACAAACACTATGTTCCTTTTCGACATGCGAGTGGTGGGGGGAG
AGAGATATATTTTCAAGAAGATGTTGATATTGATTTAGAAGATCTAATGA
GCCAGTCCCTTCCAAAGGCTCCTCTTGAAATAACATTGAAATCACATTGG
TTGGCTATTGATGGAATTCAGCCATCAATCCCAGAGAATCCTCCNTCTTT
TCGGATGAAAATAATCATCTTTGCATTTTAACTAGACGGTGTTCCTAATT
TCCACGACAGAGGCTAGTGAAAACAAACTTCAAACAAGATGGCGGCCATA
AAACACGATTTTCAAGGAAAATCTAACAAATCTTCAACTACTGCACAGGT
ACCAGGCGTTTTTACTTCCGAGATATTGAAGTCTGTCGTTGAATCTGTTG
GCTACGATAAGCCTGCAGACGAAGCCTTACAATACCTTTCTGAGAACTTA
ACATTTGTCATCAAAGAAACCATTCAAGAAGCAACCAAATTTCGAAATAA
ATCAAAGCGTAAAATGCTTTCTCCTGCTGATATTGATCACGCATTGAAAG
TAAGAAATATCGAACCAGTTTATGGATTTACAAACAAACACTATGTTCCT
TTTCGACATGCGAGTGGTGGGGGGAGAGAGATATATTTTCAAGAAGATGT
TGATATTGATTTAGAGGATCTAATGAGTCAGTCCCTTCCAAAGGCTCCTC
TTGAAATAACATTGAAATCACATTGGTTGGCTATTGATGGAATTCAGCCA
TCAATCCCAGAGAATCCTCCTCCTATCAAAAAGGAAATGCAACTAAATGA
AGTTGTGAGTCCATTCTCAAAAAGCAGGCATATAAAAGAAGTTGGTGTTG
ACAAAGTTGGTTCACTCAATAAAAACTCAACAAAAGAAGGAAAGAAAGAG
TCAAAAAGTGACAAACGAAAAGCAGAAGAGTTGAAAAAGATAGCAGATGA
AAAGGCTGACTCTCAAAAGTGCAAACCACTGGTAACTCATGAACTTTCAG
TTGAACAGCAAATGTATTATAAAGAGCTTACTGAAGCAAGTGTTGGATCT
ATTGAGACAAAACGAACTGAGGCATTACAAAGCCTTTCCAATGATCCAGG
ATTGTATCAACTTCTCCCGCGATTTATCACTTTCATCAGTGAGGGAGTTC
GTGTGAATGTTGCTCAACATAATCTTGCCATCTTAATTTATCTATTAAGA
ATGATTAAATCTCTCTTGGAAAACTCTACACTTTATCTGGAAAAATATCT
TCATGAAGTCATTCCTGCTGTGATGACCTGTATTGTAAGCAAGCAACTCT
GTCCAAGGCCTGATTTTGATAACCACTGGGCTCTAAGAGATTTTGCTGCA
CGATTAATGGCACAAATCTGCAAACATTTCAACACTCCAACAAATAATAT
ACAACCAAGAATCACAAAATCTTTATCACTTTCACTCGACATGGAAAAAG
CTCCACTTTCAACCCACTATGGTGCCTTAGCAGGGCTGTCAGAACTTGGA
TTTGAGGTTTGTAATTTTGCTCAATTATCAATATCTTGCTAACTTCAAAA
TTTGTAAAGTACCGTAACTTGGTCTAATATGAAAGCTTGAATCACTGATT
GAAAAAGGGTTATTCCTCTCTGACTACTAAGCAAAGAATGTTTTGACCTT
TCTATCAATTTCAGCTGATAAAAAGGTGTCAGAATTACAGTAGAGGACGT
GTGTCTACATTAGACCAAGTTACTGAATAGATCCGTTAAAAAATTAGCAA
TTATAGTTTGATGGCCAAAAGACCTGTCATGGGAAACACCTTAGCCCCAT
TAATTTTTGCACACCTTTTTTGTCAATGGCCTATTTAAAAATAAGATCAT
TTTATTGATTTAATTACGAGAAAAATGTTATTTATCTTATAGACGCTTTA
CTATTTTCAATCGAAATTTTTAGTTCCTTCAAAGCTTCCCACTCTCTTGT
TCGGTTGCCACTGTGAAAAAAGCAACATAGAATGAAACTCGAACTTTCGA
ATTTTTTGCAGTCAAATATCTGCTTTAAAAACACATTAAAAACACGATAA
TAGAGCTAATAAAGAATTTCGACAAACTTAGCTTTGAGCAAAATTTTTGA
TATTTTACATTCGAGTCTGCCAAAAAAAAATGTAGATGTGTATTTTGCAT
AGTTCTACTCTAGCTAAAAATAATCTTCCATCTCAGGTGATCAAGAGTAT
CGTGTTGCCAAGAATCAAGAGCGAGAGCGGTTTGATAAAAGAAGCCATTA
ATGGAAACAACAGTGCTGAGAAGAAAGCTGCTGAACATTTGCAAGCTCTT
CTTGTCAAGCATTGCACACCCGTTATTTTCAAAACCCTTTCTCATGGTGT
GGTGGAAACGCAAGAACAATTTGTTGACAAATTTGGGTTCGTTGGAAACC
TCATTTTTCAGAAAGTGAATCAAATGAAACTAACTTCTTTGAACAGACAG
CAAATCTNN

Coding sequence (CDS) from alignment at sc0000049:543912..546820-

>TCONS_00004919 ID=TCONS_00004919|Name=TCONS_00004919|organism=Clytia hemisphaerica|type=CDS|length=2982bp|location=Sequence derived from alignment at sc0000049:543912..546820- (Clytia hemisphaerica)
GTGATCAAGAGTATCGTGTTGCCAAGAATCAAGAGCGAGAGCGGTTTGAT
AAAAGAAGCCATTAATGGAAACAACAGTGCTGAGAAGAAAGCTGCTGAAC
ATTTGCAAGCTCTTCTTGTCAAGCATTGCACACCCGTTATTTTCAAAACC
CTTTCTCATGGTGTGGTGGAAACGCAAGAACAATTTGTTGACAAATTTGG
GTTCGTTGGAAACCTCATTTTTCAGAAAGTGAATCAAATGAAACTAACTT
CTTTGAACAGACAGCAAATCTNNATGGCGGCCATAAAACACGATTTTCAA
GGAAAATCTAACAAATCTTCAACTACTGCACAGGTACCAGGCGTTTTTAC
TTCCGAGATATTGAAGTCTGTCGTTGAATCTGTTGGCTACGATAAGCCTG
CAGACGAAGCCTTACAATACCTTTCTGAGAACTTAACATTTGTCATCAAA
GAAACCATTCAAGAAGCAACCAAATTTCGAAATAAATCAAAGCGTAAAAT
GCTTTCTCCTGCTGATATTGATCACGCATTGAAAGTAAGAAATATCGAAC
CAGTTTATGGATTTACAAACAAACACTATGTTCCTTTTCGACATGCGAGT
GGTGGGGGGAGAGAGATATATTTTCAAGAAGATGTTGATATTGATTTAGA
GGATCTAATGAGTCAGTCCCTTCCAAAGGCTCCTCTTGAAATAACATTGA
AATCACATTGGTTGGCTATTGATGGAATTCAGCCATCAATCCCAGAGAAT
CCTCCTCCTATCAAAAAGGAAATGCAACTAAATGAAGTTGTGAGTCCATT
CTCAAAAAGCAGGCATATAAAAGAAGTTGGTGTTGACAAAGTTGGTTCAC
TCAATAAAAACTCAACAAAAGAAGGAAAGAAAGAGTCAAAAAGTGACAAA
CGAAAAGCAGAAGAGTTGAAAAAGATAGCAGATGAAAAGGCTGACTCTCA
AAAGTGCAAACCACTGGTAACTCATGAACTTTCAGTTGAACAGCAAATGT
ATTATAAAGAGCTTACTGAAGCAAGTGTTGGATCTATTGAGACAAAACGA
ACTGAGGCATTACAAAGCCTTTCCAATGATCCAGGATTGTATCAACTTCT
CCCGCGATTTATCACTTTCATCAGTGAGGGAGTTCGTGTGAATGTTGCTC
AACATAATCTTGCCATCTTAATTTATCTATTAAGAATGATTAAATCTCTC
TTGGAAAACTCTACACTTTATCTGGAAAAATATCTTCATGAAGTCATTCC
TGCTGTGATGACCTGTATTGTAAGCAAGCAACTCTGTCCAAGGCCTGATT
TTGATAACCACTGGGCTCTAAGAGATTTTGCTGCACGATTAATGGCACAA
ATCTGCAAACATTTCAACACTCCAACAAATAATATACAACCAAGAATCAC
AAAATCTTTATCACTTTCACTCGACATGGAAAAAGCTCCACTTTCAACCC
ACTATGGTGCCTTAGCAGGGCTGTCAGAACTTGGATTTGAGGTGATCAAG
AGTATCGTGTTGCCAAGAATCAAGAGCGAGAGCGGTTTGATAAAAGAAGC
CATTAATGGAAACAACAGTGCTGAGAAGAAAGCTGCTGAACATTTGCAAG
CTCTTCTTGTCAAGCATTGCACACCCGTTATTTTCAAAACCCTTTCTCAT
GGTGTGGTGGAAACGCAAGAACAATTTGTTGACAAATTTGGGTTCGTTGG
AAACCTCATTTTTCAGAAAGTGAATCAAATGAAACTAACTTCTTTGAACA
GACAGCAAATCTNNATGGCGGCCATAAAACACGATTTTCAAGGAAAATCT
AACAAATCTTCAACTACTGCACAGGTACCAGGCGTTTTTACTTCCGAGAT
ATTGAAGTCTGTCGTTGAATCTGTTGGCTACGATAAGCCTGCAGACGAAG
CCTTACAATACCTTTCTGAGAACTTAACATTTGTCATCAAAGAAACCATT
CAAGAAGCAACCAAATTTCGAAATAAATCAAAGCGTAAAATGCTTTCTCC
TGCTGATATTGATCACGCATTGAAAGTAAGAAATATCGAACCAGTTTATG
GATTTACAAACAAACACTATGTTCCTTTTCGACATGCGAGTGGTGGGGGG
AGAGAGATATATTTTCAAGAAGATGTTGATATTGATTTAGAGGATCTAAT
GAGTCAGTCCCTTCCAAAGGCTCCTCTTGAAATAACATTGAAATCACATT
GGTTGGCTATTGATGGAATTCAGCCATCAATCCCAGAGAATCCTCCTCCT
ATCAAAAAGGAAATGCAACTAAATGAAGTTGTGAGTCCATTCTCAAAAAG
CAGGCATATAAAAGAAGTTGGTGTTGACAAAGTTGGTTCACTCAATAAAA
ACTCAACAAAAGAAGGAAAGAAAGAGTCAAAAAGTGACAAACGAAAAGCA
GAAGAGTTGAAAAAGATAGCAGATGAAAAGGCTGACTCTCAAAAGTGCAA
ACCACTGGTAACTCATGAACTTTCAGTTGAACAGCAAATGTATTATAAAG
AGCTTACTGAAGCAAGTGTTGGATCTATTGAGACAAAACGAACTGAGGCA
TTACAAAGCCTTTCCAATGATCCAGGATTGTATCAACTTCTCCCGCGATT
TATCACTTTCATCAGTGAGGGAGTTCGTGTGAATGTTGCTCAACATAATC
TTGCCATCTTAATTTATCTATTAAGAATGATTAAATCTCTCTTGGAAAAC
TCTACACTTTATCTGGAAAAATATCTTCATGAAGTCATTCCTGCTGTGAT
GACCTGTATTGTAAGCAAGCAACTCTGTCCAAGGCCTGATTTTGATAACC
ACTGGGCTCTAAGAGATTTTGCTGCACGATTAATGGCACAAATCTGCAAA
CATTTCAACACTCCAACAAATAATATACAACCAAGAATCACAAAATCTTT
ATCACTTTCACTCGACATGGAAAAAGCTCCACTTTCAACCCACTATGGTG
CCTTAGCAGGGCTGTCAGAACTTGGATTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002784XLOC_002784Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004919-proteinTCONS_00004919-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004919-exon-sc0000049-1575043694:544865..546820TCONS_00004919-exon-sc0000049-1575043694:544865..546820Clytia hemisphaericaexon
TCONS_00004919-exon-sc0000049-1575043694:543912..544184TCONS_00004919-exon-sc0000049-1575043694:543912..544184Clytia hemisphaericaexon
TCONS_00004919-exon-sc0000049-1510915933:544865..546820TCONS_00004919-exon-sc0000049-1510915933:544865..546820Clytia hemisphaericaexon
TCONS_00004919-exon-sc0000049-1510915933:543912..544184TCONS_00004919-exon-sc0000049-1510915933:543912..544184Clytia hemisphaericaexon
TCONS_00004919-exon-sc0000049-1491911889:544865..546820TCONS_00004919-exon-sc0000049-1491911889:544865..546820Clytia hemisphaericaexon
TCONS_00004919-exon-sc0000049-1491911889:543912..544184TCONS_00004919-exon-sc0000049-1491911889:543912..544184Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:543912..546820 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.3821	12.554	6.84078	6.12843	22.335	16.0959	14.2256	15.9391	7.96251	8.15794	6.1389	4.59693	5.61844	6.15021	5.33555	7.03157	8.12175	7.54073	2.6885	3.30174	5.79057	5.01938	17.8218	15.1225	11.8421	14.4227	4.52755	3.59824	10.3902	10.8442
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004823TAF_TATA-bd
IPR011989ARM-like
IPR011442TAF6_C
IPR016024ARM-type_fold
IPR009072Histone-fold
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
GO:0051090regulation of sequence-specific DNA binding transcription factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0051090 regulation of sequence-specific DNA binding transcription factor activity
cellular_component GO:0005634 nucleus
molecular_function GO:0005488 binding
molecular_function GO:0046982 protein heterodimerization activity
Blast
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BLAST of TCONS_00004919 vs. Swiss-Prot (Human)
Match: TAF6 (Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 PE=1 SV=1)

HSP 1 Score: 495.352 bits (1274), Expect = 9.860e-165
Identity = 238/462 (51.52%), Postives = 331/462 (71.65%), Query Frame = 1 
Query:  808 VFTSEILKSVVESVGYDKPADEALQYLSENLTFVIKETIQEATKFRNKSKRKMLSPADIDHALKVRNIEPVYGFTNKHYVPFRHASGGGREIYFQEDVDIDLEDLMSQSLPKAPLEITLKSHWLAIDGIQPSIPENPPPIKKEMQLNEVVSPFSKSRHIKEVGVDKVGSLNKNSTKEGKKESKSDKRKAEELKKIADEKADSQKCKPLVTHELSVEQQMYYKELTEASVGSIETKRTEALQSLSNDPGLYQLLPRFITFISEGVRVNVAQHNLAILIYLLRMIKSLLENSTLYLEKYLHEVIPAVMTCIVSKQLCPRPDFDNHWALRDFAARLMAQICKHFNTPTNNIQPRITKSLSLSLDMEKAPLSTHYGALAGLSELGFEVIKSIVLPRIKSESGLIKEAINGN--NSAEKKAAEHLQALLVKHCTPVIFKTLSHGVVETQEQFVDKFGFVGNLIFQKV 2187
            V  SE +K V ES+G  +  +E  Q L++ +++ IKE  Q+A KF +  KR+ L+ +DID+ALK++N+EP+YGF  + ++PFR ASGGGRE+YF E+ ++DL D+++  LP+ PL++ LK+HWL+I+G QP+IPENPPP  KE Q  E   P   ++     G ++ G L          + K  ++KA  L + A       + KP   HELSVEQQ+YYKE+TEA VGS E KR EALQS++ DPGLYQ+LPRF TFISEGVRVNV Q+NLA+LIYL+RM+K+L++N TLYLEKY+HE+IPAVMTCIVS+QLC RPD DNHWALRDFAARL+AQICKHF+T TNNIQ RITK+ + S   EK P +T YG++AGL+ELG +VIK+++LPR++ E   I+  ++G   ++ ++  A+H+Q+LL+KHC PV+ K       + Q+ +  +FG +G L+  +V
Sbjct:   13 VLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKP----GQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGA-----PLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKL--RPPPDNQDAYRAEFGSLGPLLCSQV 463

HSP 2 Score: 156.762 bits (395), Expect = 5.368e-40
Identity = 67/138 (48.55%), Postives = 103/138 (74.64%), Query Frame = 1 
Query:  232 VFTPEILKSVVESVGYDKPADEALQYLSENLTFVIKETIQEATKFRNKSKRKMLSPADIDHALKVRNIEPVYGFTNKHYVPFRHASGGGREIYFQEDVDIDLEDLMSQSLPKAPLEITLKSHWLAIDGIQPSIPENPP 645
            V   E +K V ES+G  +  +E  Q L++ +++ IKE  Q+A KF +  KR+ L+ +DID+ALK++N+EP+YGF  + ++PFR ASGGGRE+YF E+ ++DL D+++  LP+ PL++ LK+HWL+I+G QP+IPENPP
Sbjct:   13 VLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 150
The following BLAST results are available for this feature:
BLAST of TCONS_00004919 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAF69.860e-16551.52Transcription initiation factor TFIID subunit 6 OS... [more]
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