TCONS_00050031 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050031
Unique NameTCONS_00050031
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050031 ID=TCONS_00050031|Name=TCONS_00050031|organism=Clytia hemisphaerica|type=transcript|length=340bp
aaaaaacaccaGATATCAGTATCAGGTAGAATTGAAGATCGCTGAAAGAA
AAATCCACGTTGGTATATCGATCGATACAAGCTGTTCTTTTACCGTCATC
TATGGTGAATGGTTCAACATTGCAAGCGATACACAATCCATCACCATAAC
CTGCTTTGAAATGGTTGACTGGACAAAGCACACATTTGAATTCTATTCTC
AAGTCGAAAATCTCACTCGTTTCCCGTTCTGTGTATACTTTATGGAACCC
TGCGATACAACTATCAACTTTGGTGCATGTGAATTGATCACTGGAGCAAG
TTCCTATTGGTGaatatgaagatgaaaattaatATTGGTA
Run BLAST on NCBI

protein sequence of TCONS_00050031-protein

>TCONS_00050031-protein ID=TCONS_00050031-protein|Name=TCONS_00050031-protein|organism=Clytia hemisphaerica|type=polypeptide|length=103bp
KNTRYQYQVELKIAERKIHVGISIDTSCSFTVIYGEWFNIASDTQSITIT
CFEMVDWTKHTFEFYSQVENLTRFPFCVYFMEPCDTTINFGACELITGAS
SYW
Run BLAST on NCBI

transcript from alignment at scaffold_167:317543..331426-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050031 ID=TCONS_00050031|Name=TCONS_00050031|organism=Clytia hemisphaerica|type=transcript|length=13884bp|location=Sequence derived from alignment at scaffold_167:317543..331426- (Clytia hemisphaerica)
AAAAAACACCAGATATCAGTATCAGGTAGAATTGAAGATCGCTGAAAGAA
AAATCCACGTTGGTATATCGATCGATACAAGCTGTTCTTTTACCGTCATC
TATGGTGAATGGTTCAACATTGCAAGCGATACACAATCCATCACCATAAC
CTGCTTTGAAATGGTTGACTGGACAAAGCACACATTTGAATTCTATTCTC
AAGTCGAAAATCTCACTCGTTTCCCGTTCTGTGTATACTTTATGGAACCC
TGGTAAGCAATGTGTTTTAGAGCAGTTCGTTGGAAGCCAATAGTCTGTCT
CCTCTAAGAATTTCTTTGACTGCTTGACTTTGATGTCATATAAATGGCGT
AATACTGGACCTAACGGCTCTTCCATATAAAAAGGTATAACGTAGGAATA
TCCATACAAAGCCTCCATATCCTTCAAACCTGCGCTTAGAGCCGGCACAG
GACTCATATCATAACGATAATTCGATACATAATTTTTCAAGTCACCGAGA
ACGTTAACATAGCCGTATGGTTTTTTGATTGGCTGTTGTCGTATATAAAG
CCATTGGATAAACTCTGATGGAGTGAAGATTGGTGTCTCAAACTCCCTTA
AGCTGTGAGGGAAATGTACGATCATTGTCGTTTCTTTGTAATTATGACGT
AAGAAATCTTCCATAGTATTTATTAAATAATGACCATGCTCCTCTTGCAC
AAATATGACAACAGCAGAAGTCCGAACAGAAGCGTCTGCAAAGGTTCTGT
TCATTGTTGATAAAAAGAAATTTTTCATTTTTTCGTCGTCAAAAAGCACC
TCATAAGTCACATTGAACTCTTTGGCTTTAATACAAAACGTTTGCGTGTT
TTTCAATGTTTGAATTGACTGTTTGTAATAGCTGGTCCAGTATTCGCTTG
TTATGTGACCACTTGTCGGCGTCAATAAAACTAGTGTCACATCGTACCAA
CCGAAGGTTTCTAGCAAGCTTTTAAGTTCATTCGCTTGTGTCTCGATAGA
TTTTAACTCAATACGATCATCACACCTTGTGGGAGCGCACAGTTTCATCA
CTTTGCTAAAGCTTAGAATGGATTTTGCTAACTTTGACATATCAGGAGAG
ATGTGAAAATACAAATACAATATATTCTGGTTTCTCCACACATTATTTCC
ACCAACCATATCTGGCTCAAAGAAATACTTTTCATTCAACGTTGCTTCCA
ACAACAGATCAATAAATTCATTAGTATCATTGCAAATCACATAATCGGTA
TAATTTTGGGCCCATATTTTATCTATTGCTTCAAGATGCCGATTTTTTAT
CCTAGTTCGATTAGCCTCTATACTAAGGGTACTTCCATTATCTGGACATA
CATACATAATATACCAATTGAATTATATTCCTCCATTCCTCCAAGACCAT
ATTTCAAATAGAATGGAGAACTTGCATTGATTTCAACGACTAGATAAAAA
CAGTTGAACGAGAGTAAAAATATGCTTGAATATCTTGTCATCTTAATATT
CTTGACTGGTCTACGCCTTACAAACCGTCTTTTACAATGACTACAAAAGA
ATACACCCAAGTTGATTAAGTGTGATCCTTTTATAGTCCATTTGCTAAGA
TCTATTCTAAATACACTTTTTCGACCGTTGTCTCGCGGTCAGGCGATTAT
TCAATTATCCCCTTAAACTCGATCCAATCCTTTTTTACAACTTTTTCTAT
TGTCTATAGGTGCGAAAAAAAGACTGGGACGGTTTTAGAGTTGTAAAACG
GACGAGAAAATACCACGCGGCAATTGGCGGCTACGGTCGAAAAGTTGTAT
ATCATTTAAGAACCTTATCTTTTCATTATGGAAAGCAATTAAAACAGAGT
GCTTAAAAATAAGGGTCTTAGACATGAGGGCTCTTTATCATGTCTTTTCC
AGATGTTATCAGTCTGATTGTATCGTTATTAAAACCTTAAAGGAAGAAAT
TTTGGCGGGAATTTATTTTGGCGGATGGCCGAAAAAGTTTTTTAGATGGA
ATTTAATTTGGCGGATGGACGAAAAAACTAAATTTGGCGGGAATTTAATT
TGGCGTTTGCTGAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAATTTGGCGGATGGCGGAAAAAAGAAATTTTGGCGGGAACTTA
ATTTGGCGGATTCTGGCCAAATCCGCCAAATCCGCCAAATTTTCTTTCTG
CCAAAATTTCTTCCTTTAAGGTACCTGGATATTGCTATGTCTACATTGTA
CTTCAATGTATATTGCTGTCGTTTGGTCCTGATTTTAATAGTGTTTGGAC
TACTCTAGGCTATGGTATAGTCTAAGAAAAATCACTACCTAAGAAATAAG
CTCAAAGCCGAAAAATAATTCGCAAACAGGCTTTTTTGTCGAAAAGAGTT
TACAGCAGGTAGAGTTTGCAAGTCTAAGTCCAAGCAAAACTACAAAACCG
TTTTTATGCTAAAGAGTTATCCTCCGTTTCTTCGAAACTCTCCCGCCGAT
TGTTTTCCGTATACTGCCATATTTTCCCGTCTTTACTATCACTGTAACGG
ACGATAACATCGTTTAGGACTATTTTGTGTAACTTATGGCAAGTCCCAAA
ATCAAAAAAATATGAAATTTTGCCTCATGACTGTTATATGTGATCACAAA
CTTTTGAAAATTAATTTTGGCTGAAAAGATGATGACGTCATCATTTTTAA
AGTTATTTTTCCCTCAAATTGCTCCTTCTCAATGGGATGCATCTTTCGTG
AAAATTTCATCATATATTTTTATCACTACTTTTTGGCAAATTCTAATTTT
AAGTTTAATGACGTTATCGATGATGTAGGTATTTATAGTCATAAAACAGT
ATTTCCCTAATTTCTTGAAAATAATTTTAATTACAGTGATTTCTGAAATC
TACATCCTTATATGCTAATTTTACACCCTTTCTCAAAGACCTGGTAGGAT
TTATTCAGCCAGTGGGGGGGATAAAAATAACGGACTGAAACTCGATGGGG
ATTGATATTTCCATATCTTTTATGGCTGGGGATTTTAATTCTTTTGTTTT
CAAGTCACAAAATTCAATGGGGATGGGAAAAATAGCATAATATTTTGGAG
TGAGTATTGGCCTATTTGATTACTTTCAGTGAGGACAACAATTGGAAGAA
TAATTTTCCACTGGGGACGATATCTTGAAGAATTTTTCCAGTGGGATGGG
GTCCCAGTGGGTCTGTGAGAGGGGGTGTACTTTTGACGGACAAATGAACA
TGTCTAGGCCCCCAGATTTTTGCGCTTAAAATTTGGCATTCTGGGACATG
GTTAGAATAATGCTATGATCTTCATTTTTATATCAGAGATCTTGAAACGT
CAAAAATGCGAAAAAACTTGAAAAAATATCTATTCAGTCAAAAAAGACAG
CTTAAAACTTTGCCCTGATTGACATAAAAAGGGGCTCTTTTTTGTTGTTC
TTTTGTCAATCAGTGATAAATTTTGGACTATATCGTATTGTACATTTTTT
TCTGGCTGGTTGTACCTTTTTCTTGGTGGTTGTACCTTTTCCTGGGTGAT
TGTACCTTTTCCTGGGTGATTGTACCTTTTTTCTGGGTGGTTTTACCTTT
TCCTGGGTGGTTGTACCTTTTCCTGGGTGATTGTACCTTTTTTCTGGGTG
ATTGTACCTTTTTTCTGGGTGGTTGTACCTTTATCCTGGGTGATTGTACC
TTTTCCTGGGTGATTGTACCTTTTTCTGGGTGGCTGTATCTTTTTCTGTG
TAGATGTACCTTTTTTCTGGCTTGTGGTACCTTTTTATGGTTGGTTGTAC
CTTTTCCTTGGTGATTGTTCCCTTTTTCTGGGTGGTTGTACCTTTTTTTT
GGGTGGTTGTACCTTTTTTTCCTGGGTGGTTGTACCTTTTTTTTGGGTGG
TTGTACCTTTTTTTCCTGGGTGGTTGTACCTTTTTTCTGGGTGGTTGTAC
ATTTTTTCTGGCTGGTTGTACCTTTTTATGGGTAGTTGTTGGTGATTGTA
CCTTTTTCCTGGCCGGTTGTACCCATTTTGGGTGGTTGTTCATTTTTCCT
GGTGATTGTTACTGATTGTGGGTGATTGTGGCTGGTTGTGGGTGATTGTG
GCTGGTTGTGGGTGATTGTGGGTGATTGTTACTGGTTGCGTATTTAAGTT
TTACCCAAAAACATCGGAGGCTTCCAATTATTTGTGTTTTCAAAAAAAGT
TTTTTTGTTTTTTTTTTGTCTTTTCTTTTACCACCAATAAAATAGGTATA
TATCTAAATATATCTAATATTTACAGCTTTCTTTTTTATTGTTTTTATGA
TAAAGTCTATGCGAAATAAAATAAAAAGTTTATGCGAAAGACGATTCCCC
AGTGTACCCGAACGAAGACCTTCCGGACCAAGCGGGGCCTATCCGTTAGT
TAGAATGGTCTTGTTCTGTGAACCCCAGGGAAGGTCTCGCATTCGGAAAA
GTAGAGGAGCAAGGGAATCCCTAGCAAATAGTAATGCGGACCGATGTGGA
GACTCAAAATGGGGGTAGTGGAGGGAGATTCCCCCAAAAGGTTATGTAAT
TAAGAGCAAGTTCCGTCTGCGCTGAATAGCCTTCAAAAGTGCCTGTCTAA
CACCCAGACCTTGTTTACGACTGCGTTTTTATGGATATTTTGGTGATTTT
TTTTATGTTAAGGGCTTTGACCATAGTCAGAAAATTGATTTTAGTATCTG
AACATAAAAGTTATGTTTTAGATTCTTTAACACTTTTAACAAAGAATTGC
CTTTATGAATTGCTTTTTAATCAAACCCCTTAAGAGTAATTACCGTAAAT
CACCGATTAAGCGCCCCGCTTGAATTAGCGCCCCGCTCGAATAAGCGCCC
CCCTTTTAGTTAAAATAATCTTATAAGCGCCCCGCTCGAATAAGCGCCCC
CCTCAAGGGAGGGGCGCTTATTCAAATATTGTTATTAATTGAATAAGATA
TTGAGTAGATACTTGTGTCTTAAAAAGAAAGAAAGCGATTAAGAATAAAA
TGATAGAAATTGTCAATTGGATTTTTCCAATTTTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCAAAAGTCTTCATTTTCTTCTTCATCAAAC
TTTTTCAATGCAAATTTTGAATTTTCAGATTCAGGAATAGTTTGTCTAAC
AGAAAATGTGTAACATGCCATAGTTTTGTTGGTTACATCAGTCAGAAAAC
ACATTTTAAACACGGCAATTATGAAAAATTCACTATGGTCAGAGCCCTTA
AATTACACAAGTTCCAATTTTTAATTTCAAACCTCACTGCATTTAGACGA
AATAAGATTTTCAATAAAGACATGATAAAGAAGAAAAAGAAATATGGAAA
AGGAGACAAGATAAGAAATAGAATCTAGACAAAAATCCAAAAGGCAAGGA
GACAGTAATATCGAAACATTGATAAGATATGGCTTTCAAAATAAGTGCTC
AATTCACTCGCCCACTTCTCTCAATATTAGTTTTTGAGAGATTTCACTTG
TATTGGTAGTAAGAAAAATGGGGTAGAGACACGAGAAAATGTTTCAGGTT
GGTGAGATGGAGCATGTTGCATCCCACCATAATGCAAAAAAGACTTCTTG
TGTCCCCAAGCCTTAAGAGTCACGTACGATCTGATAATCACTTATATGAT
TCTACGAAAGTCAAATGCCGAATGTGATTTCAAAGACTTTTTTTGATTCC
CAATAAAGAGTGGATACATGAGAAAAATTCTTTTGAAGATGTTGAAATGC
AAAACGCTCTCCCACTATAATAAGGGGCCGTCCATGGAGGTGGGCTGGCT
CGGCTAGGTGAATTTGGGATTCAAACGTCACGTGATCTATTTTTAGCCAT
TTGATTCGTCCAAAACTGTAAAGTAACGTTCGAAAATCTATCTATCTCAC
CTCCTCCAAGATTTTCTAACCGAAGAATAGAATTTATCATCTCATCGGGA
TTTCAATGGAAAATTTCATCCCTACTGTTGGAAAAAGTTCCACCGGGGCT
GTGAGACAGGGGTGTTACAATTAGATAGGTAAAGTATTTGTGGTAATGAA
AGTTCATTAAGAGTATTTAATGTTATTCATAATGTTTTATTCTTTAAAAA
CATTCTAGAAACTTAAATTAAAATAATATTGCTAACTTAATTATTCCAAA
CAAACAAACAGAGGAAACAGTCAAATGTGAATTTATCATTAAAAAATAAA
ATAAAAGTTATAACAATAAGGCAATAAAAATTTATTTATATACACTAGAA
AAGATATGAAAATTTTGATTTTTACCCTGATTTAAAAAAAAAGTCAAGAT
TTAATTATTCATATGTACGTTACATATCAGGCACGTATTTCATGTCAGGC
CATGTACATACCTTATTGTTTTATTTCGTTTGATTTTATTTCCAGTAAAC
ACAAATTGCTACATATTTGAGGCTTTTTCTAAAACAAAACCCACAACTAA
TTTTCAAAATTACTTTCTTTTTGGTAAATTCAGTAGGCATTTCAGAATGA
GCTAGATTTAAAAGAGATTGGGCTGGAATCAATTATATTGCAACAAAAGA
TGCAAAAATGGCGTTTGTTGTATGTCAAATACTATTCTTCACTCAATCCA
GTCATGTCCGGAATTGATCAATCATATAATAAATAAAATCGTTTTTCAAA
AAGTTTATCATATCATTTTTTTTTTTCATCTTCCAAATAGTTTTTCTCGT
ACTCAACTCCATTATCTATGGTCGTCGATCCATTTCATAACCATTGTTAG
GTTTACCGCTACCGTTATATTTTCCTTGTGGTTTTGAACTTTTCGATTTA
CGATTCTTCATAACGATGACGATGATAATGATGAGGATGATTAAAGCTAA
AATGATACCGATTGCGATACCAGCTTTTTGAGCAGTTGTCATGCCTTCTG
ATGATTCATCACTTGATGGTGGAGCCTTGGTGGTTGAGCGTGTGAGTGGC
GGTACAGCTAAAGAAATTTAAGACAATATTGGTAAAAACATAAAAAGTTA
GAATTGCTCCATTAGTACTAAAACTTGATATCTTGATGGTTTATATTTTC
ATTCTTTAAAAGAGTGCCGAAAAGTTTGAAGCTAGGTAGTTTTCCTTTAA
GTTCCACTTGTCTTTTAGGCCAAACCCTGTTTAGGCACGTTAAAACAACA
AATCAAAAACCTGTAGATACTCTAACTTATTTACAGTTGATTCTCTCTAA
TTCGATCTTTTATTGACCAAGAATTTTCTTTCGAATATCCGAGGAAAGAG
AAGGATTCGAATAACGGTCAGTATTTCATGGTACAGCTAGTCAAGCGTAG
TCAAGCGGAGACTTAAGTTCCAGTTCTAATTAATGAAAAATTCAAATAAA
AGAGGCTCGAATTAGAGAGAGTTTGCTGTTTATCGTCGTTTGATATCAAA
AAAATTCTGCTGATTTTAGATAAACTCCAACTGACCATATACGCACGCCC
CCTAACGGTTTGTGTCAATGCGTGAAGATTTTAAAAAGCTGCGTGAAGGC
GTGAACTTGAAAAAAAAATGTCTGATTGTGTGAGTTGAAGGTCCGCTGGG
GGGGTCATAATACTGAGAAGACTTTTCTTTTAAAGTTACATAGTTTGTTT
GGAGGAGAAGTTGAAAGAACTTACATTGACCAACGCTGATTGGTTCACTC
CATGGTCCATCACCTGAAGGGTTCACACCTCTGAATCTCACTTCATACTC
TTTACCAGTGACTAAACCATCCAATTGGAATTCGACAACAGCTCCGGCAA
GATAATTATGTTGTTTTGAGGAAGATAAGAAAACTTCATCTTTACGAATG
TCACGAACTTCAATTTCAAAATGATCGATTCTGTCTGCTCCAGGGAAATT
AGGGAATGTGAATTTGTAAGATCCTTGGCTTTTTTCTTTGACATCGATTT
CCTTTGGTCGGCTTGATGGTACCTCTGTTGAGAAAAAAATGAAGAAGGAA
ATGAGTAATTTAAAAATCTTAAGTGAAACACACTTTTGTATAACTTAAAC
ATTTTGAGACGGGAAACAGGGCTAGAGAGGAACTGGATACCACAATGGCT
GATCATGAGCTGCGGAGGAAGGGTTATTGTTTATATCCGACCCATGCGTC
TGATGATACACATCTCCCGAAGATTCTTTCTCTATACAAATAGGATACGA
AACTCCCGAAAACGTTCAAACACAATTCATCATACACTAACGAATGGATG
AACAATTCACAATGTTTAGAATTACCTTGATTAAGTAAACTTAAATCTGC
TAAAGCTTCGATTTAGTTTTAAAAGAAATCTAAAGCTTGTAAAAAGATAT
TGATAACCGATTCTGACACTCAAAAATGTTGGATGTTTTCGTTTAAGAAT
GACATAAAAATCAAGAAAACCATACCGTGAAAACAACAATTGATGATAGT
GTTTAAAAAGAGCCATACTAAGTCAACAAAATATCAGAACGAGATAACGA
TCACTTTATATGTAATGGTCAACTTACTACATTGAGCGCCAANTCAACAA
AATATCAGAACGAGATAACGATCACTTTATATGTAATGGTCAACTTACTG
CATTGAGCGCCAACTTTTTCATCAGAGGCATCACCACAATCTTTGATAGC
ATTGCAAAGATTATTTTTGTCCACACATTGTGGTGATCCAGTACATCTAA
ATTGGTCTGAAGTGCATTCGTCTAAAGAAAAAAAATAAAATTGAATCATT
TATTGTGATGATCATCGGCAAGGACAATAGAGCACCGTAGGCATGTTTTC
CGCCGACGTTTCTCGAAGAAATGACGTCTTCCGCATCGGAAAAAGAACAA
CCTACTGTTTTTCCCACGATTCTCGTGTCAACCTGACACATCCCAGTTTG
CACACAGGGTTATTTCAAAATTCATCTAGCGTTATATGGACGTTGAGAAT
ATTGGATAAACGTTGAAACAATGTTTACATCTATATCGCTGATAGTCTAT
ATTATGATAATGATTGTATGAACCATTCTCTTTGGGGGATGGTCAAAATG
GGTCCGACTCCTCACGAAGTAGATATCATGATGTATATTGAGGGCACTCG
AACTACACGGCAGAGAGTACACATTTTTTATAAAATTTTGTATCAGAAAA
GTGGTACCCAATTCCCCTCACATGTTATGAGTTGACCGGGGGGGTTTCAT
GGTTGGCGGAGGAGCGGAATCGGCCCTTTTTTCGGACGGAGTGGCGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNACCCCCCCCCCCTTGACCCAGGTGAAGGT
GTGTTAATTTGCCAAGTAAGCAGTGGGAATCGAACTTCGACCTCCCAGGC
GTCAATAACAATGATCACCACTCTTCTACGCTTACGTTTGCATTACAGTG
ATTGTTTCATGTGAATTTTATAGATATTTTGTTTTACATTTCTATTATGA
TGTGAGCTGACTAAATTCTTATTTCAAACTCAGTGAAAATTCAAGTCACG
TTTTACTTTTCTATAGTTTTCCTTTTCTACGGGGACGGTTTGGGCTAGAA
GAGAAATTCGGTTGAATCTGTTTAAAGAAATTAGCAATTAATCACTTTTA
ACGATTGTTGTGGTCACATCTCTATATTGGAAGCAATTTGACATCATTAC
TTAATGTTGATTGGTGTATATCCTGAATTTCTTTACTCCTTGATTATTTC
CGATTTCTTTTTCTCTTTAGGGTAGGGGTTATATAAGAAAAAACGACAAT
AATAATGGAAGTGAAGAAAAAATTCGTCTGACTCACCTCTTGGTTTTGTT
TTATACGTGTCCTTAATGGATTTGCCTTCAGCGCCTTCTGAATCAAAAAT
CTTGATCTCCCATTCGTAGATATCTTCACGGTTCAAACCTTTTATAACTT
GATCATGACCTGTAGTTTTTTCCGTTGTTTTACATGTATCTTTAAGATTG
ATTCGACAATATATGACTTGGTAACTGAAGACTATTGATTTGTCAAAATT
GAGTGGTCGTTGCCAGGAGATTACAAAAGATGATGATTCAAAGAACTCAA
CAGGTGTCAATTTCACATTGAGGACTGGACCAAAGTTTTCTGAAATGAAA
GAAATGATTTAAAATTATGTTTAAATTATGTTTAAATTATAGAAAATAAA
AATCTCAGAATCTCTTAAAACTAGTTATACACACTCCAACAAATCAATTC
CACCTATCAACTCATGAAGCGAGTGTGTTCAAAATTTACTAGGTAGGATA
GATTGTAGATTTCTAAAGACGTTGCATAAATTTTTACACAGTTACAAAAT
TTTAATACTCTGAATATAAATAAAAACTGCAACGGAAATTTCAAAACAAG
ACTCGTACAAACCTTAAACCAATTTCAACAGAATGAGAAAAACTCAAAAA
TTTTTTCAAGATATTTCCACCTACCAGTTCTGGTGATAACATCAGCAGAC
CATTGTCCATCACCGACAGCATTTCTAGCTCGAACACGAATTTTATATTC
AGTATCGACAGTCAAACCTTCAATTTTGACTTCTTTGATTGGTCTACCGA
AAGCCTCGTGGCTAATCTTCTTGGTGATTCCTTTGTCTGTTTTGGTATCT
ATGGTAGATTGGTAGGTTTAAANAATTATTACTGGTATTAGTAAATAAAT
ATTCAAGCTGCATTCTGTGAAAATTCCATTCGAAAAACAACAGTATTGAG
GTGACAGAAAGCATTGAAAGTTTAGCATTTGAAAATTAGTTCTTTTAATA
AAATGTGTTTTATTTGGTCCTAAATTTATAAAAATTTATTTGGAATTTAT
AAAAATATACTTCAAATAAGGTAATAAGAGAGGATAGTGAGAAAAATTTG
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACTTAGTTCTTATAAACCACGAAGACACAGATAGAACATCCATTTA
CGACAAAAACAATAGCGTCATCATTCCAGCCGCGGCTTTCTTATACTATG
GTTTAAAGTTTAAATGGAAGAATCGTTTCGCAATGACTAGAAAATACCTT
AGTTTTGAATACAATTTTATTTATATTTTATTTTATTTCTTACAAGAAAC
ATCTAATGGACGTTAGTCTCGCAATATATTGATTGGTGGAAAACGTAAAA
TGTAGAAGCAGCAAATTTGTAAAACATAAAAATGAAGCGACTGCTTAGGT
AGAAATTTTCGTCATCTTTCGTGACTTCATCAGCATCACACGTGATGAAG
TCACGAAAGATGACGAAAATTTCTACCTAAGCAGTCGCTTCATTTTTATG
TTTTATTGATTGGTGAATATTCATTATCGAAAGACTAGTCGATTTTGTCT
GAGATTTTAATTCAAATGATTTAAATGGTAAATTATTAACAATTGTCAAT
GGCTTTGACATCATCTCCGATGCCTCTATTTATTATCAAACCATTATTCA
GGGTATGTACCCCTGATACACCACTCTGCCATTGATCGTAATTATTTGCG
TAGGAAACATTTTTATGGTCACACTTACCTACAACATAAACATCATATTC
TTCAGCTCGATCACTGGCAGCAACTTGTTCGAAAGATACAGTAAACCCAG
TTGATTTGACCATCACTACTTTGACGTCTCCAGGGACATTCTTGGGGAGT
GCTATAAAATGGGAAAATAGATGGGGTTGAAAAAGAATTCATTTTCGCCA
TTCAAAACTAAAAAAACAAGTAGGAAATCCATTGTAAAGCAAAACTTCTT
GGTACAGGAAAAAATGCCTGGGTATCCAGGGTATCTCAACCCTTGACACT
TCACCTCCAGTGGATCAGATATACAGGGGACTGTGGAACTCCAAAAATTG
ATATCCTCAACAGCGAGGGGTGGGTATGAAAAATTTCTAGAACACCCTGC
ATTGAAAATGAAAGCGCTACTTACGACAATTAGCATCGGTCCCTTCGTCT
GATTTATCTGCGCAATCAACCAATGTATTACATATTCTGTCTTTAGCGAT
ACAACTATCAACTTTGGTGCATGTGAATTGATCACTGGAGCAAGTTCCTA
TTGGTGAATATGAAGATGAAAATTAATATTGGTA

Coding sequence (CDS) from alignment at scaffold_167:317543..331426-

>TCONS_00050031 ID=TCONS_00050031|Name=TCONS_00050031|organism=Clytia hemisphaerica|type=CDS|length=624bp|location=Sequence derived from alignment at scaffold_167:317543..331426- (Clytia hemisphaerica)
CGATACAACTATCAACTTTGGTGCATGTGAATTGATCACTGGAGCAAGTT
CCTATTGGTGAAAAAACACCAGATATCAGTATCAGGTAGAATTGAAGATC
GCTGAAAGAAAAATCCACGTTGGTATATCGATCGATACAAGCTGTTCTTT
TACCGTCATCTATGGTGAATGGTTCAACATTGCAAGCGATACACAATCCA
TCACCATAACCTGCTTTGAAATGGTTGACTGGACAAAGCACACATTTGAA
TTCTATTCTCAAGTCGAAAATCTCACTCGTTTCCCGTTCTGTGTATACTT
TATGGAACCCTGCGATACAACTATCAACTTTGGTGCATGTGAATTGATCA
CTGGAGCAAGTTCCTATTGGTGAAAAAACACCAGATATCAGTATCAGGTA
GAATTGAAGATCGCTGAAAGAAAAATCCACGTTGGTATATCGATCGATAC
AAGCTGTTCTTTTACCGTCATCTATGGTGAATGGTTCAACATTGCAAGCG
ATACACAATCCATCACCATAACCTGCTTTGAAATGGTTGACTGGACAAAG
CACACATTTGAATTCTATTCTCAAGTCGAAAATCTCACTCGTTTCCCGTT
CTGTGTATACTTTATGGAACCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031694XLOC_031694Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050031-proteinTCONS_00050031-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050031-exon-scaffold_167-1575043694:331175..331426TCONS_00050031-exon-scaffold_167-1575043694:331175..331426Clytia hemisphaericaexon
TCONS_00050031-exon-scaffold_167-1575043694:317543..317630TCONS_00050031-exon-scaffold_167-1575043694:317543..317630Clytia hemisphaericaexon
TCONS_00050031-exon-scaffold_167-1510915933:331175..331426TCONS_00050031-exon-scaffold_167-1510915933:331175..331426Clytia hemisphaericaexon
TCONS_00050031-exon-scaffold_167-1510915933:317543..317630TCONS_00050031-exon-scaffold_167-1510915933:317543..317630Clytia hemisphaericaexon
TCONS_00050031-exon-scaffold_167-1491911889:331175..331426TCONS_00050031-exon-scaffold_167-1491911889:331175..331426Clytia hemisphaericaexon
TCONS_00050031-exon-scaffold_167-1491911889:317543..317630TCONS_00050031-exon-scaffold_167-1491911889:317543..317630Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:317543..331426 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.603312	0.0991429	0.216062	0	0	0.865797	1.39273	1.95579	52.2613	57.667	15.0908	79.1802	14.9481	6.54676	44.2889	27.065	2.19215	9.16507	0.320667	0	0.523689	0.717434	0.0353554	1.04997	1.74461	2.56217	0.606276	1.18894	0.843988	2.09956
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050031 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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