TCONS_00050214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050214
Unique NameTCONS_00050214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1434

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050214 ID=TCONS_00050214|Name=TCONS_00050214|organism=Clytia hemisphaerica|type=transcript|length=1434bp
TGCAGGATTGGGAGCTTGCAGGTATATAATATGaggTATGAATTACTATA
AAACAAAATGGAATAAGACTTTATGATAAGGTGTCTGTTCTGTGACACTG
GTATAATATTGGTTATTTACAAGGATGTCGAAAAGAAAGACACTTCTAtc
atggcttcaatcctttgcACCTGGTTTCCTTGCCGCTCTTTTCTATGGCC
TGGTTTCTGGTTCCATGTCCTTTCTTAACAAGGTTGTGTTGACAACATTC
AAATTCCATTATCCGGATATCGTGATGCTGGCCCAAGTTGTGCTGACGTC
AATTGTGGTGGAATTGTGCAGGGTGACCAAGATGTGCGACATTCCACAAT
GGACTTGGCAGAGGGGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTGCA
TTACACACGACACTGGCATTGGCTGCTTTAGCAGAACTTTCCATCCCAAT
ATATAATGTTCTGCGACGCATGTTGCCATTGGCAAGTCTTCTAATGGCAA
GATATGTATTGAAAAAGACGCTCTCACGAAAAACTTATGTCGCAATCGCT
TTCACTGTTGTTGGCACTCTTATGGCTGGCTTTGGCGATTTGCAGTTCAA
ATTATACGGTTATGTGGACGCCATTTTGAGTGTGATGGCGCAATCTTTCT
ACTTGACTTACGTTCAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTT
TCAGTTCTTCATTTGAACAGTATTAATTGTATCCTACCGCTCATGATGTA
TACTTTGTGGAATGGTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCA
AAGACTCATCTTTCAACATGTCGTTCATGATCAATGTTTCCATGGGATGT
GTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATGAATTCTGCTCTTAC
GACCAGTGTTGTCGGTGTTGTGAAAGGCGTCATAACGTCCATCATTGGTT
TCTTTACTTTTGGAGGAGTGCCACCCTCCGCCCTTACACTGGGTGGTGTT
TCAATGAACGCCCTTGGAGGTGCGCTTTATACATTCGCAAAATATCGAGA
AAAGCAGATATTGTTGCAGAAAGCTAAGACTGAATTGCCTCTATAATGAG
GTTTTTCATTCTGAtttataaaattgattttagcaaaatttagGTAGGCA
TACCATAAAAATTATGTATAGCAAAATCCTTATTGGAAATAAGAAATGTA
CTTGGAATGTACCATTACCTCTCAAGTATTGTAATGGCGCCTATTTCATG
GGCTTGCTCTAGTTGAAGTTTTCGTTTTTGGGAGTAgctaaccctttaag
tgccaatgtcgatattggacatgggctatataggaggacgaagccctcct
gtaatgcggaaatcgtcatttttggtctaactcgtaggaattggattggg
cttcatggtcaagcaaaaaaaaaattcaaaagNN
Run BLAST on NCBI

protein sequence of TCONS_00050214-protein

>TCONS_00050214-protein ID=TCONS_00050214-protein|Name=TCONS_00050214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MSKRKTLLSWLQSFAPGFLAALFYGLVSGSMSFLNKVVLTTFKFHYPDIV
MLAQVVLTSIVVELCRVTKMCDIPQWTWQRGKEFLIPSLCFALHTTLALA
ALAELSIPIYNVLRRMLPLASLLMARYVLKKTLSRKTYVAIAFTVVGTLM
AGFGDLQFKLYGYVDAILSVMAQSFYLTYVQKTGIEKGASALSVLHLNSI
NCILPLMMYTLWNGSLLQAARFEGFKDSSFNMSFMINVSMGCVLNYSLFL
CATMNSALTTSVVGVVKGVITSIIGFFTFGGVPPSALTLGGVSMNALGGA
LYTFAKYREKQILLQKAKTELPL
Run BLAST on NCBI

transcript from alignment at scaffold_168:99555..111570+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050214 ID=TCONS_00050214|Name=TCONS_00050214|organism=Clytia hemisphaerica|type=transcript|length=12016bp|location=Sequence derived from alignment at scaffold_168:99555..111570+ (Clytia hemisphaerica)
TGCAGGATTGGGAGCTTGCAGGTATATAATATGGTAAGTTTATTTATCAA TAAAAGAATTGCTAAATCAAGATGCCCTAATCTAAACCCCATTTTTCAGA ATAAATGGCAGAAACCGTTGAGATCTCCAGGGCAGACAAGACTCTTTTTT GAGGGACAGGGCAGATTTCGATCAAATTTCAATCTCAGCTCAGGGGACAG gggcaaaaaagctcaaaatttccctaattttacaaggttttcaaaatttt tgagcaaGTTTGGCAATTTCAGGGGCAGGGTTTTCAATTTTCCACTTGTG GGGGTAGCCATGAGATGTTCTGAAAACTGGTGCTAAACCAGCCAATCATT TTAACATGGGGTGGATTGATTAGATGATTGATGATTGTTGCTCAAATCCA TCAGttacagtcagggaaatccctcaattgcggtagtaaatttttactgc aattgcagtataaacgtcaattttacaattttcatacACCGCAATTGCAG TACATTCAAGAatcagaattcaagattcaaggaaaaaataggcaattttt gtacataattgatcatatctttttaacgcacagacaaaatattttttccc tagatcagattcttttaataaagaaaagctttcttctcgtaagatttttt atagtcgatgtttgtttatctttgtcgaccagcactatatgtagtcgtta taagcctttgtaggctaaacacgaatgaaaactaccgcaattgcagtata ccgcaattgagggatttccctgactgagtTAGGGGGATGTTAATCaaaaa ttcgattgtcgaaccaattgaatactgtgagtggtcctaaatctgacagc cctgcctaaatctgacgtggtctttcaaagtCAGATAcaatctaaaataa aaacaaatcttttgctgtgacgcaacgaaaataccaaagtgtcaactaaa ctgagaaatttgatacagttaaccagtcgaaccaaataaTTAGGAATAAT CGCTTCTTATACGAAACAtgatttttattgcaatatAGTATGtccaacgt cataaatgacaacaaaaGTAACTACTTTtcttttacaactcacacttttt aattataTACATTATTGACATCTTAACATTATAGCCATCtattgttagat gttttgaatttgttttgagattaacttggagagggagtgtttgtaaacat agaattcttTTCATAActgttatttggggggtcggaagaAGGCAgtgctg tcggatttaggaccactcacggtataatCAAGATCAATCAAAGTGATTGG CCGAGTTGATCACTGAAGTCATTCGAAGTGATCAAGAGCGATCAATCAAA CTCAATCGGAGTGATACATCAAGGTCCATATTACAGATTTCTCTGTTGAC AAAGATATTTTTTACTGACTGACTGTtggatatctggcctgtattttcac ttactgtttaatctctttgacaacaaatttgttatgATAACtcaaccaag tttatcaatcatactttctgtcgtAACATGCCACGGTAACTTTCACTTAT AGCGccccctttttaacttttttgttttcattcaaaatggccGGATGCCN GTCTTCGAcacgacaaaaaactttcaaatttttttattggcattgggccg ataagtttcagaccccctcccccttgcaCTTATCtgccaaaatttttcaa aaccaacTTAACTACATcttcaaaaacacaattttgtCCAATCATGTCCG CCATCGGGTTCGTCTCGCCTTCTCACCTTCTCACCTGTCATCgttgaatt tttgtctatttgcgccaacattgagtttgttcatacctgcattgatattg ttaatcaaaacaaaagttaagaATACACTATGAAgttgcaacattttgaa gtaAACGGCAGCACGTtggccaatgaaaaaagagttttttcatCATAGCT aattcaaaactgtacttttaaagttgCAAATTTGTGCGCGAAGGTGAAAG TAAGTGAAATTGTAtatgctttcagtggagtttgtggatgaaatcaaaaa gaaattggctgaaaagtttttcttcccaatacttgtttttttatcggtat gtagttgtttcaaaaatatgaaaaattttcaggaaacattggaaaattgg gaaaactCTCAAGGTCATAGGACttcttgagattttaagggGACCTCGAC CACCCCCTAATTTGTTTCCCCTAAGATACTTCCTCTAGAAAAGGAAGATG CTCAAAGGGTTAAGATACCTCTGTaccgaaaaattaagattttagcACTA AAAggtttttctctattttttatcaaaaattacaaTATACAGTCTTCAGT TTTTGACGTAATTACGTCAGTTGCCAGTGTCAGCGGTCGTAAGATTAAAT AAcatatttgtaaatatttttatatttcagtAAGATGTCTAGTGAAACAT CAGAGAAAACATTGAAGTCCCCTCCAAagggtgatttgaaaataaccaAA GTATATCTCATTCTGTACAATGTTTCTCTTATCATTGGCTGGGGTCTGAT CTTTCTAAAAGCAATGATCTACATATCTGAAAAGAACTCTTTCTCTGGAT TATACAATGAAGTTGAGTTCTGGCTCAAAGTATCTCAAACAGCAGCCTTG TTAGAGTTATTACACTCTATATTTGGTTTGGTCAGATCATCTATATTTAC AACTTTACCACAAGTGGCTTCAAGAATCTTTGTCCTTTGGTTTATTGTGG ATCCTCTCTTAATGCAAGACGAGGTTGCTAAAGAGAGCATTGGATTCCCT ATGTTGCTGTTTGCTTGGAGCATCACCGAGATAGTACGCTATTCATTCTA CGCCAATGCATTAATGGATAATGTCCCTTATTCTTTGCAATGGTGTCGTT ATACGTTTTTCTTAGTGTTATACCCAATGGGTGTCACAGGTGAATTGATT TCCATTTATCATTCCATTCCATATGCTACCAAGACAGGAAAGTTCTCTAT CAGATTACCAAACAAATTGAATTTTGGTTTCGATTTTGTTTGGCTTTGCT ACGTCTTATATCCTGTCTATATTCCTGGATTCTATCATTTGTTTACATAC ATGCTGCGCCAACGCAAGAAAGTTCTTGGAAAACCGAAAGCTGAATAGAT ATCCTGTTATAAACTTTTGATATGATTTCATGTGATGAAAATAATGTTAG AACTTAGAGACTTTTTTTCTTGGAATATTCGCTGATTTTAATATTCGAAA TTCAAATTCCATTGCTTGAATCATTCCTTCCATCGTCGGTAGTCATAGCA ACAATtgacaaataaaataaacaggAAAAAATATATTCCTTAGGTATATG TCTTCCTATTTTTATGAAACTTGATGCTAGGTCTTCCCAGCTTTtttaat attcttttttcgaaattaacTAGTTAATAAATAAAAGATTTAGAACCATT TGTATTATTTAGATAGATTATTATGAATtacgatttttattttcttgact ACAGTACTTATGTTATATGAAACGTGTAACTTATAATTTTCTTGGAGGTG TCAAtagattttttaattcttatgTTTCACACACACAATTGTGTTTTTAT CTAAAAAGTTTAAGGTGCTAATAATactattgaaaatgaaaataaaatta ggTTTGAAAAGattgcaaatattttaaaatgttctttagaAATGTTTCAT TCGTCGTCTTTCGTGATGTGGACGTTCCTTAAATCTATaaattattagat ttttttttNGCATTGGATTCCCTATGTTGCTGTTTGCTTGGAGCATCACC GAGATAGTACGCTATTCATTCTACGCCAATGCATTAATGGATAATGTCCC TTATTCTTTGCAATGGTGTCGTTATACGTTTTTCTTAGTGTTATACCCAA TGGGTGTCACAGGTGAATTGATTTCCATTTATCATTCCATTCCATATGCT ACCAAGACAGGAAAGTTCTCTATCAGATTACCAAACAAATTGAATTTTGG TTTCGATTTTGTTTGGCTTTGCTACGTCTTATATCCTGTCTATATTCCTG GATTCTATCATTTGTTTACATACATGCTGCGCCAACGCAAGAAAGTTCTT GGAAAACCGAAAGCTGAATAGATATCCTGTTATAAACTTTTGATATGATT CCATGTGATGAAAATAATGTTAGAacttagaaactttttttcttggaaaa tttcgctgatttttattttgatattcaaTGATTTCGAAATTCAGATTCCT CTGCTTGAATCATTCCGTCCATCATCAGTAGTCATAGTCATAGTCATAAT TGACAAATGAAATGaacgggaaaaaatattttccttataatagaaggcat tttgtaaaatcgctcgattgttttggtcaaagcacttgttatacattttt ggaaagctaaggtaggggaatcaaaattacttttttttcggacactttgg tgtgattttcggacgaatatgacggtctcaggcaaaaatcataaggttaa aaattaatgaaaattttagcttgagaaaacggagacctgttgtatatttt tggaaagctgtcaaaaaattaggattagagattattgcaagtataggtga tttctgtacctaactggagatattgagcttcaaaaagcgccaaaactgga caaaacagctgtttctggctgaaaaacacggttttcaagggttaatatct cgagttaggtccgaaaatcacaccaaagtgtctgaaaaaaaattggaacc ttagctttccaaaaatgtataacaagtgctttgaccaaaataatcgagcg acctcaaaaaaacgaacaaatttccccctactatattaggcaaaaataaa aaaatgtagcgtttttttatgaaaaaaaattttttttttctatatggctc atcataaagaaaatcaagttgactgtacaagctatcaaacgtcgtttggt tagatattcctgcttgtaaatcaagttttgtttgttAGTAGTTgatggca ttcaaaaattgtgtgaggttttcaaaaacagcaaaaaaaaagaaatttga atttcctttttaaaaataactcttttcaaacgaaacttcacaATATTAGT TCTAAAGTAAGTTGAagtaggttgaaaaaaaaaattttgtaaaatgggcc aaaattgcagcacaaatcaagaaaaacactatgttgataaaacagcagcc acaaatttgttcaatgggtaaaatattttttcagatgaaactcgtagcaa aagggtttatccacaaaatatcaaaaatggaaccaaaattattgggtcat tgggctagaattgtggctcaaagttgacgatttttttcatatatgctttg attgaagccacatttcaagcccattgaaaaccctgcagccacaaattaaa cccataagtatctttataaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNttaaaaaatattgaagttttaaagc aggacagcacatataagccaacctgttgagtgagccacatgacatacagc cacaaaacctgccctcactttgccatctaatatttcaaaactgagtcact caacttcaaagagggccacatttttggaaagctcatcaatttccttattt tatggagttttgtactacacagcagccacaagaatgtcaacaatgtgggc taaaaagtggttgtgattgaaaacctcactttttggggttctatttttga atgtaatcagttgatacattagtattcaggcaTTCTGGAAacactgaatt tttttattttcgccttaggTATTATGTCTTCCTATTTTTATGAAACTTGA TGCTAGGTCTTCCCAGCTTTTTTAATattctttttctgaaattaacTAGT TAATAAATAAAAGATTTAGAACCATTTTGTATTATTTAGATAGATTATTA tgaataatgatttttattttcttgaccACAGTACTTATGTTATATGAAAC GTGCAAACTATAATTTTCATGGAGGTgtcaaaatagattttttaattctt atgTTTCACACACAATTGtgttttttatctaaaaagttTAAGGTGCTAAT AATactattgaaaatgaagataaaattAGGTTTGAAAAGAttgcaaatat tttaaactGTTCTTCAGAAATGTTGTGTCGTGATGTGGACGTTGCTTATC TATaaattattagattttttttctaacaaTACCAATCCAAACATCAGAAA TCTATGTATTGTATGGCATTTCAAGTTATTTTCTAGACCTTAACGGATTA AATGGATAGAAACATAATTAATATAATTTGATTAGTTATTGAATAAGCAA TGACCTACATCATCTCCATGAGAACGCCCAACTGAAATGATCAACTtctc ttattttcttttttagaggTATGAATTACTATAAAACAAAATGGAATAAG ACTTTATGATAAGGTGTCTGTTCTGTGACACTGGTATAATATTGGTTATT TACAAGGATGTCGAAAAGAAAGACACTTCTAtcatggcttcaatcctttg cACCTGGTTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCCATG TCCTTTCTTAACAAGGTAAGAGTTTGTGCGTTATAATAGTTTTTTCCTTC ATGATTCTAAAGCATTGGAGATACTTGGCACATTAGAAGTAGTTTGAGCT ACTTTGGTAGGGTATTTATCTATTTTATTCGAATCTCAAACAAACATAAT GGAATACAATTGAACATAATCAAAGCTTTCGATTGACACACCGTCTGGAC CATTGCAATGTcagataaaaacaaaaccccctcTGGTTATTCGAATTAAA TTCTTATCCCCCCTggagcttcgaataaccgggagtctactgtactttca atctggcgtttgtgtgaaagCTACACGGGTCACACGTTTTGgattcattt tttataagaacaaactatggcTGCTGGGGTAGCCAGGGAATAAAAAAGTG GCTTCATTACGCATCCAAGAGTTTCAAATCTCTAGCACCTTGAAATCTAT TCATtccttatgttctcatatagtttgttcttataaaaaacgagaATATG TGATGAGAAAATCGTGTTTGGGTTTTTCACCATAGGTTGTGTTGACAACA TTCAAATTCCATTATCCGGATATCGTGATGCTGGCCCAAGTTGTGCTGAC GTCAATTGTGGTGGAATTGTGCAGGGTGACCAAGATGTGCGACATTCCAC AATGGACTTGGCAGAGGTATAATAAACGGCACACAATTATAAGAGGTAGA AAATGATATCTCGCAATGGGCTATGATAAAACACTTTAAAGATTTCAGGT CAGAAgatcttcaaaaaatttactTCGTAAACGCTATGGAAAATATTTCC TGGACTTGGACTGAATTTTAGGCTTTAGATTAAAATATCGTTTTCGTTTT AGGGGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTGCATTACACACGAC ACTGGCATTGGCTGCTTTAGCAGAACTTTCCATCCCAATGTAAGTAGGCC TTTAATCCTCTTTCGTAAAGGATCCTTTTTTTGTTTGAACATATTCCGCA AGAACCTTTGCATTAGCATGAAATTgcgattttctttatttctggttcca acaatatcaaatcaaaatcaaaaatcaagaattgaacTTTATAATCCATG AAAAGCAAAAGTTCCATTCAATGAAAACATTGACTGACTTTCTCTCTTCA ATTCGCATTTCTCAGATATAATGTTCTGCGACGCATGTTGCCATTGGCAA GTCTTCTAATGGCAAGATATGTATTGAAAAAGACGCTCTCACGAAAAACT TATGTCGCAATCGCTTTCACTGTTGTTGGCACTCTTATGGCTGGTATGTG ATTATGAACCTATGACTTGAATATTTCTTGAACTCGAttagttttatggt cccttgcTTCAGTTAAGGATGacttataaatctttttttaataactcgaa atttccttaacttttGTTCCTCTATGAGTTTTCCATAAACTCCATTGTTG ATGTAATTATAGTCCAGAACAGCGAGTTCTCGGGTTCTTTAGAAGGGAAC AAGATGTCATTATTTTAAACAtgaatattaaaatttttattaaaaaaact ttttaatcacTTTAGGCTTTGGCGATTTGCAGTTCAAATTATACGGTTAT GTGGACGCCATTTTGAGTGTGATGGCGCAATCTTTCTACTTGACTTACGT TCAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATT TGAACAGTATTAATTGTATCCTACCGCTCATGATGTATACTTTGTGGAAT GGTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTT CAACGTAAGTTGAAATGATCCATTCTCTCTTTTCAGGAATTCTTTATTTC ATCTTTTCTTGAGaatagtttaggtataaacaaAAATCAAATGTCTAAAA TACTCTGAGGCTTTTGTTATGTGATATATGTTctgattgtttttttctga gcCAATGAGCTTTCGCATAGAGGTGGTGTACCTTTCGGCTCACTCAGCTT TTTGATGGTGGCAGAGAAATCTACCCTTATCCATGACGAGCCAACAAAag cgaaattttcaatttttccacACCTTTATTTTTCAGATGTCGTTCATGAT CAATGTTTCCATGGGATGCGTGTTAAACTATTCGCTTTTCTTGTGTGCAA CTATGAATTCTGCTCTTACGACCAGGTAAAATTATAGACGATTTTTGTTA GGACCACTGAAGTTTGGCCTGAGGCTTGTCTTTTCGAAAGTTTTCAGGCT AATTTAGCTTTATTACTCACCTGAAGAGTGTCAAAAAACTAGGAACCGTC ATTCACTTTGTCATATTTGAGATCAGACTACTCTAGATTTTCTTTCTAAG GCGCTTTGGACAAACAAGACAAATTATGTTTACCTTGTATGGNGTACGTT CAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATTT GAACAGTATTAATTGTATCCTACCACTCATGATGTATACTTTGTGGAATG GTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTTC AACGTAAGTTAAAATGATCCATTCTCTCTTTTCAGGAATTCTTTATTTCG TCTTTTCCTAAGAAAAGTTTAggtataaacaaaaatattaaatacTCTGA GGCCTTTGTGATGAATGTTCTGATTGTTTTCTTTCTGAGCCAATGAGCTT TCACGTAGAGGTGGTGTACCTTTCGGCTCACTCAGCTTTTTGATGGTGGC AGAGAAATCTACCCTTACCCATGACGAGCCAACAAAagcgaaatttcaat ttcaaaatttttccacaCCTTTATTTTGTAGATGTCGTTCATGATCAATG TTTCCATGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATG AATTCTGCTCTTACGACCAGGTGAAATTATAAACGATTTTTGTTAGGACC ACTGAAGTTTGGCCTGAGGCTTGTCTTTTCGAAAGTTTTCAGGCTAATTT AGCTTTATTACTCACCTGAAGAGTGTAAAAAAACTAGGAACCGTCATTCA CTTTGTCATATTTGAGATCAGACTACTCTAGATTTTCTTTCTAAGGCGCT TTGGACAAACAAGACAAATTATGTTTACCTTGTATGGGTCAGTGCTTGTT TTTCTAGGAACAACACCTATCACTATAATGCACCCCCGCCCCACTTTTCT TCCCTTCAACTATTCTTCCCTTCAACTATTCGATCACATTCACATACTAC GTACGCACTGAGGGGAAAGTAGCCCATTTTTTTGCATGTAAAATTCTGTG AAAGAGATAAAGAGTGAATTGCTGTCCTCGCGAAATAATAAGCGACCTTA AACAAATACATttcatttttgtgtttttgactGCTCATTCTCAAtgcaaa aacataaaaagtttctaattaagttgtctttttgaaATATAGGCCCAATC CAGACGATtgcttttcaatttcttttcgtTAGGGAGTGGAAAAAGTACTT ACCAACAAGGGGGTATAGGTGTATATACGTTCGCTTGCGTACACCTCCCT TCGTGTAGTAGAGTAcacgatttttgaaattttgtacgTACGTACTATGT TGACGGACCCTTAATGCAAATGATTAACCTGAAGTGATTAAAATACTCAT CGTCAATGAATACAGTGAACACTTGATGGATTCTGAGAAGTCTTTTTAAT TAATTCGATTTTATTTAATCTTTAATTGTTCTTTTCAGTGTTGTCGGTGT TGTGAAAGGCGTCATAACGTCCATCATTGGTTTCTTTACTTTTGGAGGAG TGCCACCCTCCGCCCTTACACTGGGTGGTGTTTCAATGAACGCCCTTGGA GGTGCGCTTTATACATTCGCAAAATATCGAGAAAAGCAGATATTGTTGCA GAAAGCTAAGACTGAATTGCCTCTATAATGAGGTTTTTCATTCTGAttta taaaattgattttagcaaaatttagGTAGGCATACCATAAAAATTATGTA TAGCAAAATCCTTATTGGAAATAAGAAATGTACTTGGAATGTACCATTAC CTCTCAAGTATTGTAATGGCGCCTATTTCATGGGCTTGCTCTAGTTGAAG TTTTCGTTTTTGGGAGTAgctaaccctttaagtgccaatgtcgatattgg acatgggctatataggaggacgaagccctcctgtaatgcggaaatcgtca tttttggtctaactcgtaggaattggattgggcttcatggtcaagcaaaa aaaaaattcaaaagNN

Coding sequence (CDS) from alignment at scaffold_168:99555..111570+

>TCONS_00050214 ID=TCONS_00050214|Name=TCONS_00050214|organism=Clytia hemisphaerica|type=CDS|length=6804bp|location=Sequence derived from alignment at scaffold_168:99555..111570+ (Clytia hemisphaerica)
ATGTCGAAAAGAAAGACACTTCTAtcatggcttcaatcctttgcACCTGG
TTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCCATGTCCTTTC
TTAACAAGGTTGTGTTGACAACATTCAAATTCCATTATCCGGATATCGTG
ATGCTGGCCCAAGTTGTGCTGACGTCAATTGTGGTGGAATTGTGCAGGGT
GACCAAGATGTGCGACATTCCACAATGGACTTGGCAGAGGGGTAAAGAGT
TCCTGATACCAAGTCTGTGTTTTGCATTACACACGACACTGGCATTGGCT
GCTTTAGCAGAACTTTCCATCCCAATATATAATGTTCTGCGACGCATGTT
GCCATTGGCAAGTCTTCTAATGGCAAGATATGTATTGAAAAAGACGCTCT
CACGAAAAACTTATGTCGCAATCGCTTTCACTGTTGTTGGCACTCTTATG
GCTGGCTTTGGCGATTTGCAGTTCAAATTATACGGTTATGTGGACGCCAT
TTTGAGTGTGATGGCGCAATCTTTCTACTTGACTTACGTTCAAAAGACCG
GTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATTTGAACAGTATT
AATTGTATCCTACCGCTCATGATGTATACTTTGTGGAATGGTTCTCTGCT
TCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTTCAACATGTCGT
TCATGATCAATGTTTCCATGGGATGTGTGTTAAACTATTCGCTTTTCTTG
TGTGCAACTATGAATTCTGCTCTTACGACCAGTGTTGTCGGTGTTGTGAA
AGGCGTCATAACGTCCATCATTGGTTTCTTTACTTTTGGAGGAGTGCCAC
CCTCCGCCCTTACACTGGGTGGTGTTTCAATGAACGCCCTTGGAGGTGCG
CTTTATACATTCGCAAAATATCGAGAAAAGCAGATATTGTTGCAGAAAGC
TAAGACTGAATTGCCTCTATAAATGTCGAAAAGAAAGACACTTCTAtcat
ggcttcaatcctttgcACCTGGTTTCCTTGCCGCTCTTTTCTATGGCCTG
GTTTCTGGTTCCATGTCCTTTCTTAACAAGGTTGTGTTGACAACATTCAA
ATTCCATTATCCGGATATCGTGATGCTGGCCCAAGTTGTGCTGACGTCAA
TTGTGGTGGAATTGTGCAGGGTGACCAAGATGTGCGACATTCCACAATGG
ACTTGGCAGAGGGGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTGCATT
ACACACGACACTGGCATTGGCTGCTTTAGCAGAACTTTCCATCCCAATAT
ATAATGTTCTGCGACGCATGTTGCCATTGGCAAGTCTTCTAATGGCAAGA
TATGTATTGAAAAAGACGCTCTCACGAAAAACTTATGTCGCAATCGCTTT
CACTGTTGTTGGCACTCTTATGGCTGGCTTTGGCGATTTGCAGTTCAAAT
TATACGGTTATGTGGACGCCATTTTGAGTGTGATGGCGCAATCTTTCTAC
TTGACTTACGTTCAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTTTC
AGTTCTTCATTTGAACAGTATTAATTGTATCCTACCGCTCATGATGTATA
CTTTGTGGAATGGTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCAAA
GACTCATCTTTCAACATGTCGTTCATGATCAATGTTTCCATGGGATGTGT
GTTAAACTATTCGCTTTTCTTGTGTGCAACTATGAATTCTGCTCTTACGA
CCAGTGTTGTCGGTGTTGTGAAAGGCGTCATAACGTCCATCATTGGTTTC
TTTACTTTTGGAGGAGTGCCACCCTCCGCCCTTACACTGGGTGGTGTTTC
AATGAACGCCCTTGGAGGTGCGCTTTATACATTCGCAAAATATCGAGAAA
AGCAGATATTGTTGCAGAAAGCTAAGACTGAATTGCCTCTATAAATGTCG
AAAAGAAAGACACTTCTAtcatggcttcaatcctttgcACCTGGTTTCCT
TGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCCATGTCCTTTCTTAACA
AGGTTGTGTTGACAACATTCAAATTCCATTATCCGGATATCGTGATGCTG
GCCCAAGTTGTGCTGACGTCAATTGTGGTGGAATTGTGCAGGGTGACCAA
GATGTGCGACATTCCACAATGGACTTGGCAGAGGGGTAAAGAGTTCCTGA
TACCAAGTCTGTGTTTTGCATTACACACGACACTGGCATTGGCTGCTTTA
GCAGAACTTTCCATCCCAATATATAATGTTCTGCGACGCATGTTGCCATT
GGCAAGTCTTCTAATGGCAAGATATGTATTGAAAAAGACGCTCTCACGAA
AAACTTATGTCGCAATCGCTTTCACTGTTGTTGGCACTCTTATGGCTGGC
TTTGGCGATTTGCAGTTCAAATTATACGGTTATGTGGACGCCATTTTGAG
TGTGATGGCGCAATCTTTCTACTTGACTTACGTTCAAAAGACCGGTATCG
AGAAAGGTGCATCGGCTCTTTCAGTTCTTCATTTGAACAGTATTAATTGT
ATCCTACCGCTCATGATGTATACTTTGTGGAATGGTTCTCTGCTTCAAGC
CGCTCGCTTCGAAGGATTCAAAGACTCATCTTTCAACATGTCGTTCATGA
TCAATGTTTCCATGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCA
ACTATGAATTCTGCTCTTACGACCAGTGTTGTCGGTGTTGTGAAAGGCGT
CATAACGTCCATCATTGGTTTCTTTACTTTTGGAGGAGTGCCACCCTCCG
CCCTTACACTGGGTGGTGTTTCAATGAACGCCCTTGGAGGTGCGCTTTAT
ACATTCGCAAAATATCGAGAAAAGCAGATATTGTTGCAGAAAGCTAAGAC
TGAATTGCCTCTATAAATGTCGAAAAGAAAGACACTTCTAtcatggcttc
aatcctttgcACCTGGTTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCT
GGTTCCATGTCCTTTCTTAACAAGGTTGTGTTGACAACATTCAAATTCCA
TTATCCGGATATCGTGATGCTGGCCCAAGTTGTGCTGACGTCAATTGTGG
TGGAATTGTGCAGGGTGACCAAGATGTGCGACATTCCACAATGGACTTGG
CAGAGGGGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTGCATTACACAC
GACACTGGCATTGGCTGCTTTAGCAGAACTTTCCATCCCAATATATAATG
TTCTGCGACGCATGTTGCCATTGGCAAGTCTTCTAATGGCAAGATATGTA
TTGAAAAAGACGCTCTCACGAAAAACTTATGTCGCAATCGCTTTCACTGT
TGTTGGCACTCTTATGGCTGGCTTTGGCGATTTGCAGTTCAAATTATACG
GTTATGTGGACGCCATTTTGAGTGTGATGGCGCAATCTTTCTACTTGACT
TACGTTCAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCT
TCATTTGAACAGTATTAATTGTATCCTACCGCTCATGATGTATACTTTGT
GGAATGGTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCA
TCTTTCAACATGTCGTTCATGATCAATGTTTCCATGGGATGTGTGTTAAA
CTATTCGCTTTTCTTGTGTGCAACTATGAATTCTGCTCTTACGACCAGTG
TTGTCGGTGTTGTGAAAGGCGTCATAACGTCCATCATTGGTTTCTTTACT
TTTGGAGGAGTGCCACCCTCCGCCCTTACACTGGGTGGTGTTTCAATGAA
CGCCCTTGGAGGTGCGCTTTATACATTCGCAAAATATCGAGAAAAGCAGA
TATTGTTGCAGAAAGCTAAGACTGAATTGCCTCTATAAATGTCGAAAAGA
AAGACACTTCTAtcatggcttcaatcctttgcACCTGGTTTCCTTGCCGC
TCTTTTCTATGGCCTGGTTTCTGGTTCCATGTCCTTTCTTAACAAGGTTG
TGTTGACAACATTCAAATTCCATTATCCGGATATCGTGATGCTGGCCCAA
GTTGTGCTGACGTCAATTGTGGTGGAATTGTGCAGGGTGACCAAGATGTG
CGACATTCCACAATGGACTTGGCAGAGGGGTAAAGAGTTCCTGATACCAA
GTCTGTGTTTTGCATTACACACGACACTGGCATTGGCTGCTTTAGCAGAA
CTTTCCATCCCAATATATAATGTTCTGCGACGCATGTTGCCATTGGCAAG
TCTTCTAATGGCAAGATATGTATTGAAAAAGACGCTCTCACGAAAAACTT
ATGTCGCAATCGCTTTCACTGTTGTTGGCACTCTTATGGCTGGCTTTGGC
GATTTGCAGTTCAAATTATACGGTTATGTGGACGCCATTTTGAGTGTGAT
GGCGCAATCTTTCTACTTGACTTACGTTCAAAAGACCGGTATCGAGAAAG
GTGCATCGGCTCTTTCAGTTCTTCATTTGAACAGTATTAATTGTATCCTA
CCGCTCATGATGTATACTTTGTGGAATGGTTCTCTGCTTCAAGCCGCTCG
CTTCGAAGGATTCAAAGACTCATCTTTCAACATGTCGTTCATGATCAATG
TTTCCATGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATG
AATTCTGCTCTTACGACCAGTGTTGTCGGTGTTGTGAAAGGCGTCATAAC
GTCCATCATTGGTTTCTTTACTTTTGGAGGAGTGCCACCCTCCGCCCTTA
CACTGGGTGGTGTTTCAATGAACGCCCTTGGAGGTGCGCTTTATACATTC
GCAAAATATCGAGAAAAGCAGATATTGTTGCAGAAAGCTAAGACTGAATT
GCCTCTATAAATGTCGAAAAGAAAGACACTTCTAtcatggcttcaatcct
ttgcACCTGGTTTCCTTGCCGCTCTTTTCTATGGCCTGGTTTCTGGTTCC
ATGTCCTTTCTTAACAAGGTTGTGTTGACAACATTCAAATTCCATTATCC
GGATATCGTGATGCTGGCCCAAGTTGTGCTGACGTCAATTGTGGTGGAAT
TGTGCAGGGTGACCAAGATGTGCGACATTCCACAATGGACTTGGCAGAGG
GGTAAAGAGTTCCTGATACCAAGTCTGTGTTTTGCATTACACACGACACT
GGCATTGGCTGCTTTAGCAGAACTTTCCATCCCAATATATAATGTTCTGC
GACGCATGTTGCCATTGGCAAGTCTTCTAATGGCAAGATATGTATTGAAA
AAGACGCTCTCACGAAAAACTTATGTCGCAATCGCTTTCACTGTTGTTGG
CACTCTTATGGCTGGCTTTGGCGATTTGCAGTTCAAATTATACGGTTATG
TGGACGCCATTTTGAGTGTGATGGCGCAATCTTTCTACTTGACTTACGTT
CAAAAGACCGGTATCGAGAAAGGTGCATCGGCTCTTTCAGTTCTTCATTT
GAACAGTATTAATTGTATCCTACCGCTCATGATGTATACTTTGTGGAATG
GTTCTCTGCTTCAAGCCGCTCGCTTCGAAGGATTCAAAGACTCATCTTTC
AACATGTCGTTCATGATCAATGTTTCCATGGGATGTGTGTTAAACTATTC
GCTTTTCTTGTGTGCAACTATGAATTCTGCTCTTACGACCAGTGTTGTCG
GTGTTGTGAAAGGCGTCATAACGTCCATCATTGGTTTCTTTACTTTTGGA
GGAGTGCCACCCTCCGCCCTTACACTGGGTGGTGTTTCAATGAACGCCCT
TGGAGGTGCGCTTTATACATTCGCAAAATATCGAGAAAAGCAGATATTGT
TGCAGAAAGCTAAGACTGAATTGCCTCTATAAATGTCGAAAAGAAAGACA
CTTCTAtcatggcttcaatcctttgcACCTGGTTTCCTTGCCGCTCTTTT
CTATGGCCTGGTTTCTGGTTCCATGTCCTTTCTTAACAAGGTTGTGTTGA
CAACATTCAAATTCCATTATCCGGATATCGTGATGCTGGCCCAAGTTGTG
CTGACGTCAATTGTGGTGGAATTGTGCAGGGTGACCAAGATGTGCGACAT
TCCACAATGGACTTGGCAGAGGGGTAAAGAGTTCCTGATACCAAGTCTGT
GTTTTGCATTACACACGACACTGGCATTGGCTGCTTTAGCAGAACTTTCC
ATCCCAATATATAATGTTCTGCGACGCATGTTGCCATTGGCAAGTCTTCT
AATGGCAAGATATGTATTGAAAAAGACGCTCTCACGAAAAACTTATGTCG
CAATCGCTTTCACTGTTGTTGGCACTCTTATGGCTGGCTTTGGCGATTTG
CAGTTCAAATTATACGGTTATGTGGACGCCATTTTGAGTGTGATGGCGCA
ATCTTTCTACTTGACTTACGTTCAAAAGACCGGTATCGAGAAAGGTGCAT
CGGCTCTTTCAGTTCTTCATTTGAACAGTATTAATTGTATCCTACCGCTC
ATGATGTATACTTTGTGGAATGGTTCTCTGCTTCAAGCCGCTCGCTTCGA
AGGATTCAAAGACTCATCTTTCAACATGTCGTTCATGATCAATGTTTCCA
TGGGATGTGTGTTAAACTATTCGCTTTTCTTGTGTGCAACTATGAATTCT
GCTCTTACGACCAGTGTTGTCGGTGTTGTGAAAGGCGTCATAACGTCCAT
CATTGGTTTCTTTACTTTTGGAGGAGTGCCACCCTCCGCCCTTACACTGG
GTGGTGTTTCAATGAACGCCCTTGGAGGTGCGCTTTATACATTCGCAAAA
TATCGAGAAAAGCAGATATTGTTGCAGAAAGCTAAGACTGAATTGCCTCT
ATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031814XLOC_031814Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050214-proteinTCONS_00050214-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050214-exon-scaffold_168-1491911889:99555..99587TCONS_00050214-exon-scaffold_168-1491911889:99555..99587Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:99555..99587TCONS_00050214-exon-scaffold_168-1510915933:99555..99587Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:99555..99587TCONS_00050214-exon-scaffold_168-1575043694:99555..99587Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1491911889:107121..107319TCONS_00050214-exon-scaffold_168-1491911889:107121..107319Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:107121..107319TCONS_00050214-exon-scaffold_168-1510915933:107121..107319Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:107121..107319TCONS_00050214-exon-scaffold_168-1575043694:107121..107319Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1491911889:107840..107970TCONS_00050214-exon-scaffold_168-1491911889:107840..107970Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:107840..107970TCONS_00050214-exon-scaffold_168-1510915933:107840..107970Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:107840..107970TCONS_00050214-exon-scaffold_168-1575043694:107840..107970Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1491911889:108157..108243TCONS_00050214-exon-scaffold_168-1491911889:108157..108243Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:108157..108243TCONS_00050214-exon-scaffold_168-1510915933:108157..108243Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:108157..108243TCONS_00050214-exon-scaffold_168-1575043694:108157..108243Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1491911889:108470..108597TCONS_00050214-exon-scaffold_168-1491911889:108470..108597Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:108470..108597TCONS_00050214-exon-scaffold_168-1510915933:108470..108597Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:108470..108597TCONS_00050214-exon-scaffold_168-1575043694:108470..108597Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1491911889:108870..109108TCONS_00050214-exon-scaffold_168-1491911889:108870..109108Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:108870..109108TCONS_00050214-exon-scaffold_168-1510915933:108870..109108Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:108870..109108TCONS_00050214-exon-scaffold_168-1575043694:108870..109108Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1491911889:110136..110224TCONS_00050214-exon-scaffold_168-1491911889:110136..110224Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:110136..110224TCONS_00050214-exon-scaffold_168-1510915933:110136..110224Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:110136..110224TCONS_00050214-exon-scaffold_168-1575043694:110136..110224Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1491911889:111043..111570TCONS_00050214-exon-scaffold_168-1491911889:111043..111570Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1510915933:111043..111570TCONS_00050214-exon-scaffold_168-1510915933:111043..111570Clytia hemisphaericaexon
TCONS_00050214-exon-scaffold_168-1575043694:111043..111570TCONS_00050214-exon-scaffold_168-1575043694:111043..111570Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:99555..111570 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.52585 0.586771 0 0 8.54347 9.39458 9.77299 15.0312 1.95702 1.70055 0 1.64009 2.1234 1.95431 1.72676 1.9414 2.15702 3.74723 0.704726 7.69749 7.01944 4.94076 9.54544 13.5053 9.51755 12.0794 6.21371 5.38955 9.07585 15.2762
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004853Sugar_P_trans_dom
Blast
BLAST of TCONS_00050214 vs. Swiss-Prot (Human)
Match: S35D3 (Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.463e-32
Identity = 88/296 (29.73%), Postives = 156/296 (52.70%), Query Frame = 2
Query:  173 GFLAALFYGLVSGSMSFLNKVVLTTFKFHYPDIVMLAQVVLTSIVVELCRVTKMCDIPQWTWQRGKEFLIPSLCFXXXXXXXXXXXXXXSIPIYNVLRRMLPLASLLMARYVLKK-TLSRKTYVAIAFTVVGTLMAGFGDLQFKLYGYVDAILSVMAQSFYLTYVQKTGIEKGASALSVLHLNSINCILPLMMYTLWNGSLLQAARFEGFKDSSFNMSFMINVSMGCVLNYSLFLCATMNSALTTSVVGVVKGVITSIIGFFTFGGVPPSALTLGGVSMNALGGALYTFAKYREKQ 1057
            G   A+ +G+ SGS++ L K +++ ++F +  +V        ++ +EL R   +  +P +     + F   ++   L ++L L +L  LS+P+Y V +R LPL ++L+   VLK    S     A+  T  G  +AG GDL     GYV  +L+V+  + YL  +QK   +     L+  ++ +++    L++ +  +   + A  F G+KD +    F+  + +GC +N++   C  +NSA+TTS VGVVK + T  +G   F  V P++L + GV +N LG  +Y  AK+ E +
Sbjct:   11 GISVAIAHGVFSGSLNILLKFLISRYQFSFLTLVQCLTSSTAALSLELLRRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAWTFPGWKDPAMVCIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVAKFMETR 306          
The following BLAST results are available for this feature:
BLAST of TCONS_00050214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35D32.463e-3229.73Solute carrier family 35 member D3 OS=Homo sapiens... [more]
back to top