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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050936 ID=TCONS_00050936|Name=TCONS_00050936|organism=Clytia hemisphaerica|type=transcript|length=1561bp
atttaatttaaaatgtCAACTTCAAATAACTAATTCTTCTCGGATtcttc
aactttgaaaaattacggGCTCCTTAACTCGATCAAATTGTATAGACTCT
TTAGTTAAtgatgccttataaaccttactcgaaaaaaattgtgttccttg
tgcgtgttcgagttacggagacaCCATTGTATCCGCAAGGCTAAAAATTG
ACCAGGCGTTTTTCAAAGAGATGACATTCCCGCAAAAATCAGTTACTGAG
AGACAGAATTAGATAAAAActtaggctgcatgcatccccaaattagtttt
gatataggggatgcgaatcaggctctTATATTgcttccgagaaaattacc
gaatagctatgtattttgcagaattttggcgacttgtctttttcaaaaaa
ctcgatgtgtattgtttgagttatttgatgcgcatcccctatatcaaaac
ttatcagaggggatgtgtgcagcctaatAAAAACTAGGAAATATACAAGA
ATACAATTGTAACAAAGCTAGAAATATGAGAACATGATTTGTTTTTGAGA
ACTCGTCACTCGTCTTTGAGGTAAATATATTTGATAAGACTTAAAACTCA
TCCTGAGACTCGGGTTCTGACGGAAGCACTTCCATGCGTATTGCATTGCA
AATTTTATATTTCGATTCTTAAAACTTTTGAATAAACGACTCCTTTAAAA
GCTTAAGAAATTTAATGACTCAAAAATTAANAttcttaaaacttttgaaa
aaacgacTCCTTTAAAAGCTTAAGAAATTTAATGactcaaaaattaatta
tcACTGTCCGAGGAGTCGTCCCTTGCATTGCCACAAGCTCCTCCCAGCGT
CCCAAAGCTGGCCGATTTGCCAGCAACTGATTTACCAGCAACTAATTTGC
CAGCAACTGATTTGCCAGCAACTTCGTTGgctgttttttcctttttgccA
GGCGCATGTTTGATCACATCCCCTATCATTCGGTCAAGGTCGACGGGGTA
TTTTTGCTTCAAAGCATctgtaaaaattgaaaaaaatgatattgaaaaat
aaatcattgaTGGTGTAAAATAGTTTCTACCCTGAAAGTATGGAGCAACT
TATGTTTTCAATCTTTTCCCATCAAAAATTATACTCACAAATTACAAGGT
ATTTATCTCCTTATTAACACAATACATACATTTTAGACACTCCTgttaga
cacccctgtctcacagccccggtgaaactttcccctacagtggggataaa
aatcgaCCAGGTTTCAGGTAAAAAAATCCAGCGGGAATGATTTTGATGTg
aaatttctaaacaatgaattCCGAATAGGGATAAAATCGAAGTCAATTTC
Taaggggctgaaattccaggatatttttcccaccggggacgaaatttttg
ctaaatattGTCCGGGGTTGGCGAAAAATCATCAATAGTCTAAAGCAGTC
TATAGTTTCCCCTTTACtatccaaagggcttatgatgcgttcagTTTATC
TACTCATCGTCAAATTATGTCCGGGTGGTAAATTTGCTTAGAATGGTTTA
GGAGGACAAAT Run BLAST on NCBI transcript from alignment at scaffold_19:14..1574 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050936 ID=TCONS_00050936|Name=TCONS_00050936|organism=Clytia hemisphaerica|type=transcript|length=1561bp|location=Sequence derived from alignment at scaffold_19:14..1574 (Clytia hemisphaerica)
ATTTGTCCTCCTAAACCATTCTAAGCAAATTTACCACCCGGACATAATTT
GACGATGAGTAGATAAActgaacgcatcataagccctttggataGTAAAG
GGGAAACTATAGACTGCTTTAGACTATTGATGATTTTTCGCCAACCCCGG
ACaatatttagcaaaaatttcgtccccggtgggaaaaatatcctggaatt
tcagccccttAGAAATTGACTTCGATTTTATCCCTATTCGGaattcattg
tttagaaatttcACATCAAAATCATTCCCGCTGGATTTTTTTACCTGAAA
CCTGGtcgatttttatccccactgtaggggaaagtttcaccggggctgtg
agacaggggtgtctaacAGGAGTGTCTAAAATGTATGTATTGTGTTAATA
AGGAGATAAATACCTTGTAATTTGTGAGTATAATTTTTGATGGGAAAAGA
TTGAAAACATAAGTTGCTCCATACTTTCAGGGTAGAAACTATTTTACACC
AtcaatgatttatttttcaatatcatttttttcaatttttacagATGCTT
TGAAGCAAAAATACCCCGTCGACCTTGACCGAATGATAGGGGATGTGATC
AAACATGCGCCTggcaaaaaggaaaaaacagcCAACGAAGTTGCTGGCAA
ATCAGTTGCTGGCAAATTAGTTGCTGGTAAATCAGTTGCTGGCAAATCGG
CCAGCTTTGGGACGCTGGGAGGAGCTTGTGGCAATGCAAGGGACGACTCC
TCGGACAGTgataattaatttttgagtCATTAAATTTCTTAAGCTTTTAA
AGGAgtcgttttttcaaaagttttaagaaTNTTAATTTTTGAGTCATTAA
ATTTCTTAAGCTTTTAAAGGAGTCGTTTATTCAAAAGTTTTAAGAATCGA
AATATAAAATTTGCAATGCAATACGCATGGAAGTGCTTCCGTCAGAACCC
GAGTCTCAGGATGAGTTTTAAGTCTTATCAAATATATTTACCTCAAAGAC
GAGTGACGAGTTCTCAAAAACAAATCATGTTCTCATATTTCTAGCTTTGT
TACAATTGTATTCTTGTATATTTCCTAGTTTTTattaggctgcacacatc
ccctctgataagttttgatataggggatgcgcatcaaataactcaaacaa
tacacatcgagttttttgaaaaagacaagtcgccaaaattctgcaaaata
catagctattcggtaattttctcggaagcAATATAagagcctgattcgca
tcccctatatcaaaactaatttggggatgcatgcagcctaagTTTTTATC
TAATTCTGTCTCTCAGTAACTGATTTTTGCGGGAATGTCATCTCTTTGAA
AAACGCCTGGTCAATTTTTAGCCTTGCGGATACAATGGtgtctccgtaac
tcgaacacgcacaaggaacacaatttttttcgagtaaggtttataaggca
tcaTTAACTAAAGAGTCTATACAATTTGATCGAGTTAAGGAGCccgtaat
ttttcaaagttgaagaATCCGAGAAGAATTAGTTATTTGAAGTTGacatt
ttaaattaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050936-exon-scaffold_19-1491911889:14..1574 | TCONS_00050936-exon-scaffold_19-1491911889:14..1574 | Clytia hemisphaerica | exon |
| TCONS_00050936-exon-scaffold_19-1510915933:14..1574 | TCONS_00050936-exon-scaffold_19-1510915933:14..1574 | Clytia hemisphaerica | exon |
| TCONS_00050936-exon-scaffold_19-1575043694:14..1574 | TCONS_00050936-exon-scaffold_19-1575043694:14..1574 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:14..1574 . |
Blast
The following BLAST results are available for this feature:
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