TCONS_00051032 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051032
Unique NameTCONS_00051032
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length385

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051032 ID=TCONS_00051032|Name=TCONS_00051032|organism=Clytia hemisphaerica|type=transcript|length=385bp
CCAGAATAAGAATGTGATGGTGGAGATCGTTGGAGTCACCGGGGTGTCAA
TGAAATTATTAATTAGAactaatcaatgatgaaatgaatAGTGCAAATGA
TAGAATCAATGGTTGGTTCCATCACCCGCACAATGGATTCCATCATCTGC
TCtattgatttcatcatttgcACCAGTGATTCCATCATCTGCTCCATTAT
TGATTCCATCATCTgctccattgattccatcatttgctATTGATTAGTTC
CAATGATTCCATTGACACCGTTGATTCCAACAATCTCCACCATCTCCGGG
CCACCATCACATCCTTATTCTAGTTCATCATTGTCAGCATTTCATTCACA
AGAACCATCTTCACCAggattgcattcaccagaac
Run BLAST on NCBI

transcript from alignment at scaffold_192:27069..27453

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051032 ID=TCONS_00051032|Name=TCONS_00051032|organism=Clytia hemisphaerica|type=transcript|length=385bp|location=Sequence derived from alignment at scaffold_192:27069..27453 (Clytia hemisphaerica)
gttctggtgaatgcaatccTGGTGAAGATGGTTCTTGTGAATGAAATGCT
GACAATGATGAACTAGAATAAGGATGTGATGGTGGCCCGGAGATGGTGGA
GATTGTTGGAATCAACGGTGTCAATGGAATCATTGGAACTAATCAATagc
aaatgatggaatcaatggagcAGATGATGGAATCAATAATGGAGCAGATG
ATGGAATCACTGGTgcaaatgatgaaatcaataGAGCAGATGATGGAATC
CATTGTGCGGGTGATGGAACCAACCATTGATTCTATCATTTGCACTattc
atttcatcattgattagtTCTAATTAATAATTTCATTGACACCCCGGTGA
CTCCAACGATCTCCACCATCACATTCTTATTCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032345XLOC_032345Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051032-exon-scaffold_192-1491911889:27069..27453TCONS_00051032-exon-scaffold_192-1491911889:27069..27453Clytia hemisphaericaexon
TCONS_00051032-exon-scaffold_192-1510915933:27069..27453TCONS_00051032-exon-scaffold_192-1510915933:27069..27453Clytia hemisphaericaexon
TCONS_00051032-exon-scaffold_192-1575043694:27069..27453TCONS_00051032-exon-scaffold_192-1575043694:27069..27453Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_192supercontigscaffold_192:27069..27453 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.19657	0.912948	0	0.543679	0.429622	0.25916	0.727869	0	0.210406	0.204226	0.671249	1.07251	0.417678	0	0	0.302648	0.620408	0.214282	1.01642	1.16938	1.14077	0.924502	1.05063	0.649276	1.15893	0.276404	0	0.223736	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051032 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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