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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051045 ID=TCONS_00051045|Name=TCONS_00051045|organism=Clytia hemisphaerica|type=transcript|length=1207bp
TGAAAGATTTGGGTATATATCTTTTATATCAgaaaaaatgactgtttaaA
AGCTTGCCCTTATCAAGATTGATCAGAAACAACAAGATTTGATATGACTA
CATACCCCTAGAGATTTCTCCAAAGCCTCAAAGTTGGAAAATTGACAAAT
CAAAAAGTGGGCCACATAACCAGACCAATACTTATTTATAAGCTGCTTTC
TTTTTCAGTTAATGGTATTGATGGTGATAATCTCAAGGAGATCATCACTT
GTAAGGAACATCAATTCCGAATGCTTGAGATGGCTGGCATAAGCCTAAAG
GAAATTTTGGCATTCAGAAAAGCATTTAAAAGTCATCAACCTCAGTCCAC
CAATGAATCAAACCCATCTACACCAGATTTGCAAACAATGgaagattttt
ttaataaaaaccaacgTTCCGTCATATGTAGCGAATCAAAACGGTACTGG
CCAAAAGGACCTCTACCAACATTCACCACACCTGAAGACGGGGTGAGTTG
AACAAGTTAGCTGAAGAGCTCAAACTGAATCCTAATGTTGGccctttaaa
agtttctgagatAAAAAGCTAACTTTTGTCACACATGATATCGAAAAGAC
GAAAACTGCGAACCAAAAAAAACGAAGAGAGCACCCCTGGTACAAATTCA
AGTCCACCAAATTCATCCATTCTCATCACAGCAAAGATAAAGGCAATGAG
ACGTAAACGATGATGAAAATGCTCAGGTACTCCATTGAGTTGGATCGAGT
TATGTattactaaagtctgttcaaaaaaaattggcagttCGCACATTTTC
ATTCATTGCTCTCGAAAGAGACAagatatattgaaaaataatacctCCTT
GGAAAGATAATTCTGAGCGGAATATTTTGAggctttaaaatcttttaaaa
actttgaaaatgaagatgaaaaattaagaagaaaaaaataaacattttat
ctACATGAACCGTAAATcatgtgcccaagttcaggaattgccataaagcc
attatggtaataaccgggagggcacattgctatacaatGTATCTACATGa
ataaaaatctttaatttacgtttttctaaaacttcgcagatttcaaatat
gtattcAGAAGTTTTATATCTGTCTAATACCGAAAGTTCCACTTTGGAGG
GCAGGAATTTTTGACCCAAGAcagcggcggatctgagggggttcaaatgg
ttcagct Run BLAST on NCBI transcript from alignment at scaffold_193:89405..91115+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051045 ID=TCONS_00051045|Name=TCONS_00051045|organism=Clytia hemisphaerica|type=transcript|length=1711bp|location=Sequence derived from alignment at scaffold_193:89405..91115+ (Clytia hemisphaerica)
TGAAAGATTTGGGTATATATCTTTTATATCAgaaaaaatgactgtttaaA
AGCTTGCCCTTATCAAGATTGATCAGAAACAACAAGATTTGATATGACTA
CATACCCCTAGAGATTTCTCCAAAGCCTCAAAGTTGGAAAATTGACAAAT
CAAAAAGTGGGCCACATAACCAGACCAATACTTATTTATAAGCTGCTTTC
TTTTTCAGTTAATGGTATTGATGGTGATAATCTCAAGGAGATCATCACTT
GTAAGGAACATCAATTCCGAATGCTTGAGATGGCTGGCATAAGCCTAAAG
GAAATTTTGGCATTCAGAAAAGCATTTAAAAGTCATCAACCTCAGTCCAC
CAATGAATCAAACCCATCTACACCAGATTTGCAAACAATGgaagattttt
ttaataaaaaccagTGAGTCAATTTTCCTTATGTAGGTACATTTATAAAA
GTGCCTTACCTATGCTAAAGgaataattttttgttgttaTTTAAAGAATT
TACAAATACATAAAAACAGCTATCAAAAACCTAAACGTTCTACCATATAA
AAATATGTTAATGGGTTTACTACAGTTTAATGTGAATTTAGACTTTTTGC
AGAGTATTCAAGTTTGACCTGGTAATAAGGAGAACAATACTTTTGTGTTT
ATTTGATTTGCGaattactttaaattttcagacgTTCCGTCATATGTAGC
GAATCAAAACGGTACTGGCCAAAAGGACCTCTACCAACATTCACCACACC
TGAAGACGGGGTGAGTTGAACAAGTTAGCTGAAGAGCTCAAACTGAATCC
TAATGTTGGccctttaaaagtttctgagatAAAAAGCTAACTTTTGTCAC
ACATGATATCGAAAAGACGAAAACTGCGAACCAAAAAAAACGAAGAGGTA
TTTTCATTACTTTTAACTTATTGTTTTTAATGATACAGTTCacaaagaaa
ttgaagaagCTTTTACTTGGGTCACGCAAGGCGCATTGTAAACAGCTAGA
CCTGAGCAGGCCTGAGTtatatttttcacttaaaacctataaattgaaac
tttatttttgtCTCTGACCAAATattattagaaaaataatttttttcaaa
gttttcactAATTTTCTGTATTCCTTTTTCAAGAGCACCCCTGGTACAAA
TTCAAGTCCACCAAATTCATCCATTCTCATCACAGCAAAGATAAAGGCAA
TGAGACGTAAACGATGATGAAAATGCTCAGGTACTCCATTGAGTTGGATC
GAGTTATGTattactaaagtctgttcaaaaaaaattggcagttCGCACAT
TTTCATTCATTGCTCTCGAAAGAGACAagatatattgaaaaataatacct
CCTTGGAAAGATAATTCTGAGCGGAATATTTTGAggctttaaaatctttt
aaaaactttgaaaatgaagatgaaaaattaagaagaaaaaaataaacatt
ttatctACATGAACCGTAAATcatgtgcccaagttcaggaattgccataa
agccattatggtaataaccgggagggcacattgctatacaatGTATCTAC
ATGaataaaaatctttaatttacgtttttctaaaacttcgcagatttcaa
atatgtattcAGAAGTTTTATATCTGTCTAATACCGAAAGTTCCACTTTG
GAGGGCAGGAATTTTTGACCCAAGAcagcggcggatctgagggggttcaa
atggttcagct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051045-exon-scaffold_193-1491911889:89405..89817 | TCONS_00051045-exon-scaffold_193-1491911889:89405..89817 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1510915933:89405..89817 | TCONS_00051045-exon-scaffold_193-1510915933:89405..89817 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1575043694:89405..89817 | TCONS_00051045-exon-scaffold_193-1575043694:89405..89817 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1491911889:90086..90301 | TCONS_00051045-exon-scaffold_193-1491911889:90086..90301 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1510915933:90086..90301 | TCONS_00051045-exon-scaffold_193-1510915933:90086..90301 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1575043694:90086..90301 | TCONS_00051045-exon-scaffold_193-1575043694:90086..90301 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1491911889:90538..91115 | TCONS_00051045-exon-scaffold_193-1491911889:90538..91115 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1510915933:90538..91115 | TCONS_00051045-exon-scaffold_193-1510915933:90538..91115 | Clytia hemisphaerica | exon |
| TCONS_00051045-exon-scaffold_193-1575043694:90538..91115 | TCONS_00051045-exon-scaffold_193-1575043694:90538..91115 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_193 | supercontig | scaffold_193:89405..91115 + |
Blast
The following BLAST results are available for this feature:
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