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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051101 ID=TCONS_00051101|Name=TCONS_00051101|organism=Clytia hemisphaerica|type=transcript|length=994bp
CTGGGCTCGGCAGAGATTAACCAAAATAGCCAAAACAGACCTATTTCACA
GGGCTGAGAAGCTTAAAAGAGTAAAATCTTATTCTCAACACTATTAGTAT
TGAAAGACCTCTATAGTGGAAAACAAAACTGGTTTTATTCGTACTGCTCT
GCTCAATACTGCTCGTACTGCTCaatttttgttaattattttttatataa
caTTATCATATCGACTCtagtaaaaataattaaatatatattttaccGTA
ATTCAATAATTTAAATGCtgaaatttaattcaaaatattttttcaaaatt
taaagtgtcccaaaaaagaaactttacaTCAACTCTTAGTGTTTTATAAG
ACCATTAAAATACAAATACACCTAAAATCGGACTATTCCAAAAATAGTCT
GTGCCCCCCTATGTTGGTctggttttttgaatgataatatccagggtggt
cagtaaaatcgggttcaaaatccagggtggtccaaagaaATGAGAGAAAC
AAATTCAAGGAGGTCCTGAAAAATGGGAACAAATGCAGGGGgtcactttt
ttaaaaaaaaatctcctcaacatagggggtacaaattttttctggaatag
cccattggtcttaaattagctttaaaaaaattaagccCACCAACTCACGA
GATTACAGCTAATCTTAGAAATCTATGCAAAATTACTTAGACACAATCCT
CTCTTTTTCAACAATGTACGTTTAGTTTTTTTGGCTAGAGAATTTATTAG
AATTTTTACTGCCGTAAAATTCAATGGATCATTTTTCTGTTAGCCCTTGC
ATAGCAGGATCggtggaacaaccgtaaaaaTTGGgcaggctgaagtctcc
ccagtctccccgttTCCGCCGCAATTGCATTGCTCATATTTGGTTCTGTT
TTCATGAAAAACAGATAGGCAAGATATTGCATCATTTGCCATACGTTGAT
TAGATTCAACTAGATTCTATTTTCAATGTCCTTGCTATCAACAT Run BLAST on NCBI transcript from alignment at scaffold_193:294070..295063 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051101 ID=TCONS_00051101|Name=TCONS_00051101|organism=Clytia hemisphaerica|type=transcript|length=994bp|location=Sequence derived from alignment at scaffold_193:294070..295063 (Clytia hemisphaerica)
ATGTTGATAGCAAGGACATTGAAAATAGAATCTAGTTGAATCTAATCAAC
GTATGGCAAATGATGCAATATCTTGCCTATCTGTTTTTCATGAAAACAGA
ACCAAATATGAGCAATGCAATTGCGGCGGAaacggggagactggggagac
ttcagcctgcCCAAtttttacggttgttccaccGATCCTGCTATGCAAGG
GCTAACAGAAAAATGATCCATTGAATTTTACGGCAGTAAAAATTCTAATA
AATTCTCTAGCCAAAAAAACTAAACGTACATTGTTGAAAAAGAGAGGATT
GTGTCTAAGTAATTTTGCATAGATTTCTAAGATTAGCTGTAATCTCGTGA
GTTGGTGggcttaatttttttaaagctaatttaagaccaatgggctattc
cagaaaaaatttgtaccccctatgttgaggagatttttttttaaaaaagt
gacCCCCTGCATTTGTTCCCATTTTTCAGGACCTCCTTGAATTTGTTTCT
CTCATttctttggaccaccctggattttgaacccgattttactgaccacc
ctggatattatcattcaaaaaaccagACCAACATAGGGGGGCACAGACTA
TTTTTGGAATAGTCCGATTTTAGGTGTATTTGTATTTTAATGGTCTTATA
AAACACTAAGAGTTGAtgtaaagtttcttttttgggacactttaaatttt
gaaaaaatattttgaattaaatttcaGCATTTAAATTATTGAATTACggt
aaaatatatatttaattatttttactaGAGTCGATATGATAAtgttatat
aaaaaataattaacaaaaattGAGCAGTACGAGCAGTATTGAGCAGAGCA
GTACGAATAAAACCAGTTTTGTTTTCCACTATAGAGGTCTTTCAATACTA
ATAGTGTTGAGAATAAGATTTTACTCTTTTAAGCTTCTCAGCCCTGTGAA
ATAGGTCTGTTTTGGCTATTTTGGTTAATCTCTGCCGAGCCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051101-exon-scaffold_193-1491911889:294070..295063 | TCONS_00051101-exon-scaffold_193-1491911889:294070..295063 | Clytia hemisphaerica | exon |
| TCONS_00051101-exon-scaffold_193-1510915933:294070..295063 | TCONS_00051101-exon-scaffold_193-1510915933:294070..295063 | Clytia hemisphaerica | exon |
| TCONS_00051101-exon-scaffold_193-1575043694:294070..295063 | TCONS_00051101-exon-scaffold_193-1575043694:294070..295063 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_193 | supercontig | scaffold_193:294070..295063 . |
Blast
The following BLAST results are available for this feature:
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