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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051540 ID=TCONS_00051540|Name=TCONS_00051540|organism=Clytia hemisphaerica|type=transcript|length=1381bp
CCGAGCTGTATTTTCGTATGAATTTTGCATAACATAAAAATAACTTTTCC
TAAAATTAGAAACTTTAGACAAGGATATTTTAATCTTGATGTCAGTGGTT
TTTTTACTTGAGTGGAGGCAAACGAAATCGTTAATCAGATATTTCCTTTT
TGGATCTGCAACCAATTAAAACCAATCAAAACATCGTAAAGTATGGACCG
ACTGATTAAGAAATATGGTGGAACTGCTCcagaaaacattcgattgtttT
TGGCAGAATTCATGGGAACCTTTATTTTGATGATGTTTGGAATCGGAAGT
GTAGCGTCGGCCGTTTTAGGTGAAGGAAAAGTTGGAACTTATCTCTCTAT
TAATTTTGGTTGGGGAATCGGATGTGCGTTGGGTGTTTACTGGTCAGCTG
GTGTATCAGGTGGCCATATCAATCCAGCTGTAACTTTAGCAATGGTGGTA
TGTGGGCGGCTCCACCCATCAAAACTTCCTGTTTATTGGATAGCTCAATT
TCTAGGCTCTTTCATGGCATCCGCCCTTTGTTTTGGCTTGTATAAAGACT
TGATTTATCTCCATGACGGAAGTTCGATCGATCTGACCTTAGGAACGGCT
GGCATTTTTTCCACATACCCTCATGACGGCGTTGGAAAGGGCACAACTTT
CGGTGACCAGgTTGTTGGCACCATGCTTTTAGTTGGAACAGTATTTGCCC
TTACCGATAAACGGAACTCGCCACCAAATTCCGGAATACTTCCACTTATT
ATTGGAttagttgtttttgttattGGAATTAGTTTCGGAATAAATTGTGG
ATACGGGATTAATCCGGCCCGTGATCTGATACCGAGGATTTTTACGGCGA
TTGCTGGTTGGGGATCGGAACCTTTCAAGGCTAATGGTTATTGGTTTTGG
ATTCCAGTTTTTGGTCAGTTCTTCGGTGGTGTGCTAGGAGCCTTATTATA
CGTCATTACTGTTGAATTACATCATCCGAAAGAAACGGAAGCCGAACGAA
TGGGTTTGTTGGAAACAGCTAAGCAGGAAGAAAATGAAGCTTAAAATTTT
CCTGAGAAGATTTAAAGATAATATTTTGGGGTAAAAGAAAGTGACAGAAA
GGGCAACTCCCCCGAGGCGAGTCAGATAAATAAAAGCTACTTCTTTACGA
TTCTTTattgatttagaaaaaaaattacaatcaaGTGTTATGATCTAAGT
ATAGAAAACGTTTTATTTATTAtatcaataaaaacattcgaaagagtatc
aATAGAGTCCTTTGTGTGAGAAATGTGTTTTTATCAAATGTATTTCATCA
TTTCAAACTTTGTTGTCGCACTTGTTTTTCTCAAATCTCTGTTTTTATAG
CGCTGCGCATACTAATGTCGCAAgacactgt Run BLAST on NCBI transcript from alignment at scaffold_202:886738..901390+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051540 ID=TCONS_00051540|Name=TCONS_00051540|organism=Clytia hemisphaerica|type=transcript|length=14653bp|location=Sequence derived from alignment at scaffold_202:886738..901390+ (Clytia hemisphaerica)
CCGAGCTGTATTTTCGTATGAATTTTGCATAACATAAAAATAACTTTTCC
TAAAATTAGAAACTTTAGACAAGGATATTTTAATCTTGATGTCAGTGGTT
TTTTTACTTGAGTGGAGGCAAACGAAATCGTTAATCAGATATTTCCTTTT
TGGTAAGCTTTGAGCATTTCAATTTTAAGAGCTGTGTTGTACATCGGTTG
GACGGACACAGAAACGTTGTCTGAAAGTTAGACGGgcattgtttttatgc
tttgTACTCATTTTTACAGTAGagcttttacacgttttttttataagtac
acCCCATTGTCACAGACCAGGTGGGATTTTCTCAGCCAGTAGGGGTGaaa
ataacgaactgaaactcgaCGGGGATTGATACTCCCATATTTATTGGTTG
GGAACTTAAactccattgttttcaagtcaaaaaattcagtggggatggga
aaaatagcatgatattttgcattgaggattgcttatctgattattttaaG
CGAGGACAAAAAAAAGAGGATAATTTTTCCAcctgggacgatattttggc
caatttttccagagGGAAGTCCCGCCAGTGGGTCTTTGAGAAGGGCATGT
AAAgtacatccaaattttttgttcCTTCGATTGTTCTTAACGTTTTAAGT
TTTTAACATAAATCTGTTCTTATTTCAACCATTTTGTGTGTATATTTGTC
CACTTTCataagaaatttggtgttttagagtcggGAAAGCCTTTAAACGC
tttaaacttgttcttaatatttttgccatcgaagcgcTATGTTCTTATGT
AGATTGTTCTTTTAAAACAGTGTAAGAAAATAAGTTACAAACCATGTTTT
TCCACATGTAGTCTATCATCAAGTCTCTAATAAATCTATAAGCAAACATA
CTGTTCAAATATTTCAGTTTCAACTACGATGGAGTATTTAtcttaaccat
atttggattgaCGAGTGCTATCAAAAACACTCCATCTTACGTGTGAAATC
TAATATTCTTAAGCCAAACATGAAATCTTGAATAGTACTTTTGATTTAAG
TTGGAATCTTTTACAGATTATTCCTTTGAAGGAAGACACTGTTTATGGGG
TGGTTACTGGGCTGCAGAGCTAGTTTgatatgaatttaaaaaaatggtgt
tttctcgtttgtttttttggcaAGCTGTcgagaaaatttgaaatagatTG
TTGTTTTAGCAATGCACTACAATCATTGGGGGGccatcagtgccataaca
tattggcacttttggctaatttaccatttttcgaaaatcgaagttcgaac
gattatttcgatctgggagggatttattggtttttaggctatatttcaag
ccctacttgaccatttttgaacttatggatcctcagatcctaaggtgaTA
AGTCTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACTCtacccttcgaac
ctactttagagcacttgcaaatcgattgtggtttcaaaacaccccggtgg
atttcctttttgtgccaagtatttcgtcACCAATTGTAGTTAACTTGTCC
ATTGCATATCGAATCTTTACTACAGCATACATTTCAGGTCTTACAAGTTT
GATTTTTATTCTACCAAGATCTTGCGAGCTTAAATAACCCTTTATAAACC
ATAAGTTGGAATGTTCGTATTTTGTGTGAATTAGAGTTACCAACACGACT
TTCTAAATCCATTAAGAACGGATTTAGAATGGGCTACAGTGTACTGTttc
cgtcgtcgcaaacgccagGTAAAAGTACAGTttgcttttgaaatatttga
tacAAAGGAAGATCATTCAGTTTGGAAAACGGAGACTTGATGCCCTCTAA
TGTACTTTTGGAAACCCACTCTCTAAGGGTGCACATGACACGCTTATTTA
GCCTATCATAGCACTATTAGAAAAGCAGAGAATTTGGCACTTATGTTTCA
TAGCCCAGGTAAAggttttccctcagtggggatggtttagGAGTTGGGaa
taaaattaaagtcaatttttcaatgGGCTGACATTGAACTGTATTTCTTC
CACTGGGAACCAAATTTTGGATAAATTTTCCAGTTGGGGTAAGGTCCCCA
GCGGGTCTGTGTAAGAggtgtaatttggcatttgagATGTTTTCATACAG
ATAAAGCAACATGTCTATGAgattgaaaaatactttttgtgatgtcagaa
tttcaatattttttctatGGTAAAAATATCGTTTTTAATGATAGATAGCC
CTCCGAATGCCTTCGAAATGGGTCTTACTCccgaaggagtaggaatcacg
gtGCTGACAGACACTGGGACTTGACAGATgcgagctgccaagccatggcg
tatactgtgacactcgaacgacactgggaggGCGATGCTCACGCTCACTC
AGAATGCTCAATTCCCCTCATATGGCACGGGTTGACCccccggggggtac
ttaggcgaaatgggtgccgggtatgtgcgagccataagggtaccttttct
cattcctcaaaagtctctcaaaggggtacaaattcaaaagttagtctctg
aaagggtcccaaaatcacgaaaatcaaaaatttctctctcaaagggtcac
gatttccaataattttgaccaaaatttggtgacaatcaaaccaaaatttg
gaaaaaatggaccaaaatttaggaaaaagtctctcaaagggtcccaaaat
caccaaaattttgtctttcaaagggtcgattttcaattttcggctcggac
atacccgtcacctcgcaaacctagtaccccccggggttgacccgggacaa
gctggagtttttacaagctcttatttgatttggtaggtcgttaagatgta
ataaatcTTATTACTCTTTCTAAAGAatgcgtcatctctatcactttaaa
tgaccaattagtgaagtctcttgtaaaaactccaaggcatctcgtTGACC
CGGGCGAAAGTACATTACACGGTGGTTATCGAACTCGGGCCTTCCAGGCG
GGAGTCAAGGATGATAGCCATTATATCACTACGCTTCATTTTTAATGATA
GTGAAAAAATCGTTCTGGTGGTTCAACTAAGTGTAAACAGTGTTTTAACA
TCAATCTGGACGCGGGTTTTGTCTAAAAGTGCGTTGTATTCCCCCAataa
ataattacaaaaaattcATTATTAAACGTATCAAAACTCTGCTTATTAGA
AAACTTTTCTTCATTTGAAGTTTGGACATGACCTTCTATCAGTGTAAAAG
CAAATCTCTGACTAACCACCACTTTGCTACCATTTTGCGTTACTGGTGTA
AGAGAcaaagaacataaaattctTCATAGTAAGATTTAGAATGCCATGGT
GACGGGTGTTTGTGAGTGGCAAGGATATCCTTCATGTTTAACACCGTCTT
TCTaaataccctgagtatcagagattaagttttcaaagaatatatcacCC
TCTCaagaccaataatataaattttatcgtgcatgtgtcaatctaaccag
tgtagaaagaatcaaatataaaatcgatttgtcggcacaggtcgatatat
gatttcggccTGTGCTTTTCATGGTAATTTCTAAAGGGGTTCGAttgacg
ttgttttaacgttctgTGCTAGTTAGGAACGGTAAAAGTGAAGAGGCTTT
AACAAGGTCAATTTCGTTAGTCAGAAGGTCAATTTTGCTCTGGGTCCGTG
TAACAGATGTATAGATCTACTCTGTCTTTCCCAAGCCACGACAGTCTTTT
TTTACGAAAGTAGAAAACGTTGGAGACCACAGTTTGCCGTCGTTAATTTG
GTGTTTTAAAATAAACAACTAGTATGACACAATGCGAGGCCAGAAAATAA
TCTCCATTGATAAAATTGCCGGCGCAAACTGTGGTCCACTTAGTAGTGTT
ttattgtgttttattttaagtgttttatttATAATATCTACAATCGGCAC
CGAAATATTTGGcgaaaaaggggaattccctcaaaactttcaaaccgcaa
gtgatttttaagtgctttgaagtacgGTTTGACAgtagaattttaactct
gagttttaacattagatttAAGACTTAAggctcaggatctaaaagctcga
AAATAGTCCAATATGGCTGAGATATGGCTCAGGTTGGTAAAATGGAAAGC
TTTTATTTGAATAAATATCTTTTATTTCTTTCCGTAGGATCTGCAACCAA
TTAAAACCAATCAAAACATCGTAAAGTATGGACCGACTGATTAAGAAATA
TGGTGGAACTGCTCcagaaaacattcgattgtttTTGGCAGAATTCATGG
GAACCTTTATTTTGATGgtactatttttttcatgatattcatgacgtaat
gttttctacggaaataccctgGTTTTAGCCAGCAGTGGCAAAtctaaact
agacaaaagttgtctAAAATATGCCACTGCTGGGTTTGAGTGGTTTGAGG
CAAAGAGCCTCCCcgaaaaaaaagcattttttgaaatacttttgaTTAAA
ATCGTGGCATCGTTGAGGACATCATTGCCACCAGATGACNaaagcatttt
ttgaaatacttttgaTTAAAATCGTGGCATCGTTGAGGACATCATTACCA
CCAGATGACATCATCATTTTTCAAACGCCAAAAATTAGACCCCTTTAACT
TTATTCTTTCgtttaaattttattgttcaagCTTTGTGAGCAGTAGCGCT
TTGGCAGGAGACAAGAGGGGAGGGGCAAATGCCCCCAGTAGCTGAACTTT
TTGGGGACgccaaaaaaaattggtaaaTAATTACTAATTTCGGGTCCATT
TTGCTTTTTCACACTTTAAAATTAGtgtttttttggccaaaaagaaTAGA
AAATACCAAAACTTTTCGTAAGCCAAGCCTTGTAAGATGccaagaaaatt
tccaaaaaccaCTGTTCTTTCTGTTGCATGGATAATACAATTGTAGATAT
TTTTCACTTTAGATGTTTGGAATCGGAAGTGTAGCGTCGGCCGTTTTAGG
TGAAGGAAAAGTTGGAACTTATCTCTCTATTAATTTTGGTTGGGGAATCG
GATGTGCGTTGGGTGTTTACTGGTCAGCTGGTGTATCAGGTAAGTTTGTA
TTAGGGAGATAAATTTCCAGTTTTGTCCAATAAAAAAATTGTGGCAAATT
ACTTTCAATGAGTACTAATAATAGGCGGTCAAGCTTTAGGATCCGTAGCT
CTTTTGTAGGCTGAAATCGCATATGATTGGCTCAAAGGTAGAcattattt
tttttgagaaaaggcATGCGAATTAGGTCTCGCTATTTTTTTATGGCTAA
AAAGCTGAGACGTTGTCCTGTGACATCTGTTATATTTTGGACAAAATTTG
GTGTCAATCACGCTCTACCTGACAGAAGCTTTAAATTCAAATGACTgcat
tttaagaaaactttttggCTCAAAATTCCATGTTGTATCCGATGATAATG
ATCTTTTTCTGCCTCTATCATCAGATGCTATGGATTCTAAGGGATATTAA
acacatcaaaaaattgaatatcaagCTAAGCTTAGATCCCGAAATTTAAT
ATTTATGAAGAGTATTCACCAAAAGAATGAGTATTTTTAGCCAAGTTCGA
CCATCTTTTCTCCATTGACTTAGAGAGCTTTTGGGACATTTGACGACCAG
ACACACAGATATATAATATCTGATTCTTGATcaattgaagttgagaaaac
aattttcaaagtaTTCTTATAagttgttggacctaccccggtggggNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGAATTAGGTCTCGCTATTTTTTTATGGCTAAAAAG
CTGAGACGTTGTCCTGTGACATCTGTTATATTTTGGACAAAATTTGGTGT
CAATCACGCTCTACCTGACAGAAGCTTTAAATTCAAATGACTgcatttta
agaaaactttttggCTCAAAATTCCATGTTGTATCCGATGATAATGATCT
TTTTCTGCCTCTATCATCAGATGCTATGGATTCTAAGGGATATTAAacac
atcaaaaaattgaatatcaagCTAAGCTTAGATCCCGAAATTTAATATTT
ATGAAGAGTATTCACCAAAAGAATGAGTATTTTTAGCCAAGTTCGACCAT
CTTTTCTCCATTGACTTAGAGAGCTTTTCGGACATTTGACGACCAGACAC
ACAAATATATAATATCTGATTCTTGATcaattgaagttgagaaaacaatt
ttcaaagtaTTCTTAtaagttgtttttgtttatattcaGGTGGCCATATC
AATCCAGCTGTAACTTTAGCAATGGTGGTATGTGGGCGGCTCCACCCATC
AAAACTTCCTGTTTATTGGATAGCTCAATTTCTAGGCTCTTTCATGGCAT
CCGCCCTTTGTTTTGGCTTGTATAAAGGTTAGattaattattttcatcaa
tcCGTGATATGCAGCATTGCAATGCcttctgacattacattacGTACCCG
CAGTATCTGATTGGTTGTatgtaaaatcagtcaaaacgtcaatttcaatc
aatcagctgttgggtctgcggaagacattgtaatggtgcatatcatgaat
atataatttgttagaccatgttcgcacgtgacagTTCCGTTTTGAAATGA
GTCATTTTATTGGCTAGAAGTGACGAAAAACTTGAATGTAGCCAATAGGA
TGGCTTCATTTTGTAACGTCTGAACCTGATTTGAAGAATCGGTTGAATTT
GGAAGCAAAACAAAAACTAGTGCACGATTAACTTAATGCGAATGGATTGG
ATTGTACGATTTTTTTAGTAAAGTAAAAAAGCAGTACTTTTGGTACTTTA
GGGAAAGGTCGTTTAGGAATTTTGAGCCGTTCATTTTCTCGAATTATTTT
TAGATGTTGCAAATTTTAAGCAACAACTTCATATAGATACAAATGAAAGT
AGATGGGAAACTCTTAATTAGCAGACAATATTAGGTAAACGTGTTAGTGT
ACGCTGATTTAAAATGTCTGCCTTTTAGATTGTTACCTActtggaggttt
tactgtattttCTTTCCTCCATAGACTTGATTTATCTCCATGACGGAAGT
TCGATCGATCTGACCTTAGGAACGGCTGGCATTTTTTCCACATACCCTCA
TGACGGCGTTGGAAAGGGCACAACTTTCGGTGACCAGGTACAAAACAGTC
ACCCCTGCGTCCCAGATCTTGGACCTATCACCCTACAACTCCAGCCTCAC
TGAAAAATTACTTTGTTTTTCAGCAATGGAAGAATGGCAATCCAATACCA
CTGAATTCTTTTACCTAGGAATAATAGACTTTATATCCCCACTGGGATTT
CCTTAGAGATTTTCAtcccactgtgggaaaaaattccaccaaAGCTGTAA
GACAGGGGCttattacagttgacgctctctattTCGATTTGCAACaggaa
ttgaattttcatcgaatgaGGAATGAGGTAGGGTATCGAAATAGAAGAAA
GTCGTTAAAATgcgagtttcttgttgacggcgaAGTTCAATATTATCGAG
TTATAGAACATATCGAATAGTAAAACGTCAGTTCATTGATAATATTGTTA
CAGGACAATAGTTTGCATGGCTTGTTTATACAACTACAAATTATCCTTTC
TATTatgttttgcttattttctactATGTCTTAATAAGTAGTCGTCTAAC
ATGATGGATAATGGAAGATTTTCGttgataccttatcggggaaaaaaatg
tcggagttttatttagtcgggttttttttcgtcggggaaaaatttcgtca
cctagaggcattttcgtcactttcccgcggccaaattttcaaattcgtca
cttttctccgacgaaatttacaatttagtcactttcacccaactaaattg
tccaaatgaaatggtttccttcactagctcgaaaaaagatcttgtaattc
gacgtttaaagcactaatttcggttaataaaggtgtaaaaaatttagatt
tcaattttggttgaggtttaaaaaattgggtaaaagttttggtcgggtga
taaaatatcggggaaaaaattcttcggaggaaaatttcgtcaccccctca
aagttttcgtcactttcccccgacattttttccccgataagatatttcgt
ttaaaattttttctttcaataggTTGTTGGCACCATGCTTTTAGTTGGAA
CAGTATTTGCCCTTACCGATAAACGGAACTCGCCACCAAATTCCGGAATA
CTTCCACTTATTATTGGAttagttgtttttgttattGGAATTAGTTTCGG
AATAAATTGTGGATACGGGATTAATCCGGCCCGTGATCTGATACCGAGGA
TTTTTACGGCGATTGCTGGTTGGGGATCGGAACCTTTCAAGTAAGTTTAA
TGAAGATTTCgaacaatttcaaaatgttgTACAGTGGAGTcactataact
cgaacacgcactaggaaaataaattttttcgaattaaagaaactttgaat
tgtagagtaaggtttataagacattGTCAACTGAAGCGAACAGAAAACTT
ACTCGAGTTGAGAAGACAGTTTATTTATAAAGGttcacgaccagcgacca
cgaccggcgaccagataaatttgggttatcgtgttttttctctttctcca
ccgtagagtctttctcttatgataatttattcatcgaattgaagagtaaa
gctcacccctgtctcacctacagtggttataaagccacgtgcaaaaggtg
tagagcagccatttcaacgctcttggagcttgaatagagtgtcaatttct
atccttttgtattttcggcatcaaattaattaaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGATTTCAATTTTGGTTgaggtttaaaaaattgggtaaaagttttggtcg
gggataaaaaaattgggtaaaagttttggtcgggtgataaaatatcgggg
aaaaaattcttcggaggaaaatttcgtcaccccctcaaagttttcgtcac
tttcctccgacatttttttccccgataagatatttcgtttaaaatttttt
ctttcaataggTTGTTGGCACCATGCTTTTAGTTGGAACAGTATTTGCCC
TTACCGATAAACGGAACTCGCCACCAAATTCCGGAATACTTCCACTTATT
ATTGGAttagttgtttttgttattGGAATTAGTTTCGGAATAAATTGTGG
ATACGGGATTAATCCGGCCCGTGATCTGATACCGAGGATTTTTACGGCGA
TTGCTGGTTGGGGATCGGAACCTTTCAAGTAAGTTTAATGAAGATTTCga
acaatttcaaaatgttgTACAGTGGAGTcactataactcgaacacgcact
aggaaaataaattttttcgaattaaagaaactttgaattgtagagtaagg
tttataagacattGTCAACTGAAGCGAACAGAAAACTTACTCGAGTTAAG
AAGACAGTTTATTTATAAAGGttcacgaccagcgaccacgaccggcgacc
agataaatttgggttatcgtgtttttcctctttctccaccgtagagtctt
tctcttatgataatttattcatcgaattgaagagtaaagctcacccctgt
ctcacctacagtggttataaagccacgtgcaaaaGGTGTAGAGCAGCCAT
catttcaacgctcttggagcttgaatagagtgtcaatttctatccttttg
tattttcggcatcaaaATATTAATGGCAAAATTTGTGCTGGAATCTATTT
AGGAAactttatatttgatcatcagatcattattttgtcaaaataagtaa
ttttgacaatgtaaggaGAATTTAATAATTGACGAGATTGACgagattga
tatctctaaaactggcctggCCCAGTATTTAGTATTCTCTAGCTAGAGTA
ATTCTCAATTCTGAATTGtatttctatgtccattttagccaatttagatg
gtttaaatttcaaaattttcttggtcgaccccaactatggtggggccTCA
TATAGGGcctcctatagatctcattttaaaacataaaagaaacggtgcaa
acagttctattcatctgccatttatccttgtaacttccgattgtttttag
cagttgctagctagtcttcaaaataataaagtcgaatgctatgagagggt
cgaaaattgaaaattttccccgtcagcacaaaccatggttgcgcttcctc
cgtaactaacattttcctctctttcttagatgcttattttcatagatgca
tcaaagacatcaggtcctttatttcaggaaaaaatacatttgtagcaaag
ccttaaacagaaagaagcaacaggtttattatgaggtgcAATTTTAAGCA
GATTAATCAAAGGAATCGtgtgatgtttaaaccatattttggaaagaAGA
GAGTAAATGAGGGTGATTTTAGTcatactaaattgaaatttctcccgtcg
gcgcaaaccatggttgcgcctcctcgttccccttttgaaaactattcacg
ctaattcacaattaatgcccatgggtcccgtcaacgggggaccagggggc
atggcccctcatgttgcttgtacttttaacagatttccattatttttaaa
tgaattatttttcaaattgaattgaaatgggtcctaaaatagcactttga
gcccttcaaaattcaaaagattttctCCGTTACCCATCAACAatggtggg
ctttgtcaatttactcaaatatacctcagccctcaaaccggtgccctttg
atgtgactagttgtccaacaatttttgatatgcataagtcaagattacgt
catttttcctatcgaaaacacccaaaaaaactttgtgggcaaaaattaag
tttatataacaaaatatgagcgtgaaaaacattttctaggcgtaatggcg
tggaatcgaaaaaaaattggcgtgatggcgtgatggcgtgatggcgtgat
ggcgtgaattttggctCCGCTGGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGG
GGGGCTCCTAAATAGGATTGAGGATGCTAAATCCGACCTCAGTTGCGTGG
CCTTAAGAGACCCGCTtagtttttatacaaatttcagattaaaagtaaaa
tttcacagtttaaaaaaatataaacctctggaaaacaaagaaaaaaatac
taaagtcaattcgtcgtcaaaaatacggtgtatattctaaggcttcactt
tttcttgcccgagaaaggttaaagattcacttctagccttttaaaaataa
aattcaaccaaaagattttttcaatagTCCCTAACGGAACCTCTAAATGT
TACTGGCTAATTGTTTTTCAAAGTCATAATATGTTTGTACAATCATAGTC
atgatattttagaaaaaagggaaatccctacaaattttcaaaaacacaaa
cgatttggaagtgctctaagcTAGGTTGGAACTGTAGAATTCtacaaaaa
tggtccaataaggctcaaaatatAGCCTGAAACCcgtgccaaattgaaat
atccgattaaatttttggcccaaaatcgactttcttgcccgaaactccaa
atttcgaaaaacgagaaaataagctaaattctcattggattttgaccatg
attgtacattCTGCTTGAAGGCAATAGAACTTCAACGTAAAGTACGTGTG
AGGTACAAAAAAATATGGGATTTTCAATCGTCATATCTTTTTCAGAATAT
gttatttcttaaaattattTGGTGGTCTTACTAAGGGCCATGGAAGGAAT
CTTTGagttaagttttattttttggctGGTTTATCCTTTTATCAATGCGT
TATTTACCTCACTCCATAGCtctaaatttccttaactcgaacaaatttgc
atGAATCTATAAAAAGGTAGCCCTTTTTTATTGATCCACAGGACTAAGCT
AACAATTTAAGCACTAGAAGACgttttcgagttaaggagttAATTGAAAT
ATTGTGATTCAAGTTACAGAGACTCAACTGTATTCATTTCTTGTTTTCAG
GGCTAATGGTTATTGGTTTTGGATTCCAGTTTTTGGTCAGTTCTTCGGTG
GTGTGCTAGGAGCCTTATTATACGTCATTACTGTTGAATTACATCATCCG
AAAGAAACGGAAGCCGAACGAATGGGTTTGTTGGAAACAGCTAAGCAGGA
AGAAAATGAAGCTTAAAATTTTCCTGAGAAGATTTAAAGATAATATTTTG
GGGTAAAAGAAAGTGACAGAAAGGGCAACTCCCCCGAGGCGAGTCAGATA
AATAAAAGCTACTTCTTTACGATTCTTTattgatttagaaaaaaaattac
aatcaaGTGTTATGATCTAAGTATAGAAAACGTTTTATTTATTAtatcaa
taaaaacattcgaaagagtatcaATAGAGTCCTTTGTGTGAGAAATGTGT
TTTTATCAAATGTATTTCATCATTTCAAACTTTGTTGTCGCACTTGTTTT
TCTCAAATCTCTGTTTTTATAGCGCTGCGCATACTAATGTCGCAAgacac
tgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051540-exon-scaffold_202-1491911889:886738..886889 | TCONS_00051540-exon-scaffold_202-1491911889:886738..886889 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1510915933:886738..886889 | TCONS_00051540-exon-scaffold_202-1510915933:886738..886889 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1575043694:886738..886889 | TCONS_00051540-exon-scaffold_202-1575043694:886738..886889 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1491911889:890925..891054 | TCONS_00051540-exon-scaffold_202-1491911889:890925..891054 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1510915933:890925..891054 | TCONS_00051540-exon-scaffold_202-1510915933:890925..891054 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1575043694:890925..891054 | TCONS_00051540-exon-scaffold_202-1575043694:890925..891054 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1491911889:891700..891826 | TCONS_00051540-exon-scaffold_202-1491911889:891700..891826 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1510915933:891700..891826 | TCONS_00051540-exon-scaffold_202-1510915933:891700..891826 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1575043694:891700..891826 | TCONS_00051540-exon-scaffold_202-1575043694:891700..891826 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1491911889:894277..894414 | TCONS_00051540-exon-scaffold_202-1491911889:894277..894414 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1510915933:894277..894414 | TCONS_00051540-exon-scaffold_202-1510915933:894277..894414 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1575043694:894277..894414 | TCONS_00051540-exon-scaffold_202-1575043694:894277..894414 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1491911889:895062..895174 | TCONS_00051540-exon-scaffold_202-1491911889:895062..895174 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1510915933:895062..895174 | TCONS_00051540-exon-scaffold_202-1510915933:895062..895174 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1575043694:895062..895174 | TCONS_00051540-exon-scaffold_202-1575043694:895062..895174 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1491911889:897848..898065 | TCONS_00051540-exon-scaffold_202-1491911889:897848..898065 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1510915933:897848..898065 | TCONS_00051540-exon-scaffold_202-1510915933:897848..898065 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1575043694:897848..898065 | TCONS_00051540-exon-scaffold_202-1575043694:897848..898065 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1491911889:900888..901390 | TCONS_00051540-exon-scaffold_202-1491911889:900888..901390 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1510915933:900888..901390 | TCONS_00051540-exon-scaffold_202-1510915933:900888..901390 | Clytia hemisphaerica | exon |
| TCONS_00051540-exon-scaffold_202-1575043694:900888..901390 | TCONS_00051540-exon-scaffold_202-1575043694:900888..901390 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:886738..901390 + |
Blast
BLAST of TCONS_00051540 vs. Swiss-Prot (Human)
Match: AQP9 (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=2 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 9.329e-61 Identity = 126/273 (46.15%), Postives = 174/273 (63.74%), Query Frame = 1
Query: 250 LAEFMGTFILMMFGIGSVASAVLGEGKVGTYLSINFGWGIGCALGVYWSAGVSGGHINPAVTLAMVVCGRLHPSKLPVYWIAQFLGSFMASALCFGLYKDLIYLHDGSSIDLTLG---TAGIFSTYPHDGVGKGTTFGDQVVGTMLLVGTVFALTDKRNSPPNXXXXXXXXXXXXXXXXXXXXXNCGYGINPARDLIPRIFTAIAGWGSEPFKANGYWFWIPVFGQFFGGVLGALLYVITVELHHPKETEAERMGLLETAKQEENEA*NFPEK 1059
L+EF+GTFIL++ G G VA A+L G+ G ++IN G+ + A+ +Y + GVSGGHINPAV+LAM + GR+ KLP Y AQFLG+F+ +A FG+Y D + G + L +G TA IF+TYP + F DQVV TM+L+ VFA+ D RN G+ P+ IGL++ VI S G+N G +NPARDL PR+FTA+AGWG E F+A ++WIPV G G V+G L+YV+ +E+HHP E + +T + E+ PEK
Sbjct: 27 LSEFLGTFILIVLGCGCVAQAILSRGRFGGVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKL-LIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRGLEPIAIGLLIIVIASSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFWWIPVVGPLVGAVIGGLIYVLVIEIHHP-----EPDSVFKTEQSEDK-----PEK 288
The following BLAST results are available for this feature:
|
