TCONS_00051542 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051542
Unique NameTCONS_00051542
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2000

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051542 ID=TCONS_00051542|Name=TCONS_00051542|organism=Clytia hemisphaerica|type=transcript|length=2000bp
ttttttttctgccgACTCAGATTTTTTTGTTCAGTTCAGCAAGTTAAGCA
CACAACACAGCAGAAAGGTCTAGAAAGAACCAGACCAGCCACCACCCTGC
CCTGCTACTCAAACACTGGTACACAACCTCTGACAACTCGGAAGTGAGAT
GCATGtggcaatatatttttcaaaccaaATAACCACAATTCTGTTGCTGC
TCTCCACTTCAGCAGGGATCGTTTTTTCGACAGAAATAACCACAAAATTA
AAAaaaccCATTTATGACAAGCAGACAAGCAGatgTCCAGAAAATGCATA
CATGCATAGAGGGAGATGTGTCTGCAATTTTGGTGCTATCACTTTTGATG
ATAATGGTAAATTTGTGTGTGAAAGATGTCTAAAATGTAGTGACTGCACT
GGGACTCCATATTTATGTGGTAACTCAAAACCTTACCCATACAAAGGAAA
ACCAACGTGCAGTCATCGATTTAGAGGCTATTACGTAAAGTTCGGAACAT
TTTACGAATGCCGAAAACCATGTAATCCAACCCATAATGAAATTGAAGTC
AATCCATGTGGTTGCCACAATCGCCTATGCAAATGCAAACCTGGTATGTA
TCGTGATCACGTGTACAAGGAATGCACCAAACATTGCTCTCCTTGCACCT
CAAAGCATCATGAACGTATTCCGGAGGAATGTGACTCTATGCCTGAAAAC
GAGAGGTGCTCTGAACCTGAAAACTACAAGTCATCAACTTCCTCAAGCCC
TCCATATACCATTAAACCATCATTCACAAAAGACGAGTCTCCAACCACCA
CATTACCACTAGAAACAACAGAAACTGATAGCCCATCAACGACAGCGAAC
ACTACAAATCATCCATCCACAACATCATCAGACACTACAACTCGCATTTC
TGTTACACACTCACACACACCAACACAAACTGATATCACTGAATCTTCTA
AAAACCCTAGAAACATAATTGATGAACCGTCGGAGGCCACTCCTGGTGAA
CCTCCCACAGACAACCCCTGGACCAACAACACTGTCATTAATGTACTTAT
TGTATTGGTGGTGTTTATTGTTGTTCTAATTGTTGCtgttgtgattgttt
tctTCGTCTATGGCAAACCGATCAGAGATTATATTTCTAAATATGGAAAC
AGTAACGACGAAGAGAACAAACCAATAATGTTGGatttgACAAACATTGT
GACGCTTTTGAATGCCAAAGTTTCAGTTGCTTTACAAGATACTATAATTA
TGGAATGGGGAACGAACATCAAAAATGCattcaatcaaatttttaatGAG
AGCAAGATTTCCAATGTCCGTGAGAGTTTTGCAGAAAGAGTCTTCGGTAC
CGAGTACCACCAAAAAATTGCTCTTTACGTTGACGGAGAAGGAGATcatc
ttttctattttctgaagGGTGAGAGACCAGAATATACATTATGCGATTTT
ATTGGTGATGTCTCAGATGTGGGAATTGAGAAGCATCTTATTGTCAAATT
CATAAACGTCATCAAAGACTTATGACTATGCTTGATTaaaaataagtatt
ttttaaaaatgatgaCTTTATCGATTGTCTGTCAAGCATGTTGAAAACCA
AAGAATGCAGTACGTGAATTCAGAGACcagaacttgaaaaaaaaatcaat
ttatcaGACGTTTTCGTTACACGCTCGTCTTCATGTATAATAACATGCAT
GAAATAATTGGATTTTATGATTTAAAGTGGTATGCTCTGAAAAATTCAAC
AGCTTTTAGTCAACAGGATAAAGATTTGCTCCCAGTATTTTAATGATAGA
CCATTATCCTTTTCAGTTTAGCATTTATTGAGCTGTAAATAATGCATTAT
ATTTCTAGCGAAacgaaaacttttttaaatattttctactGAAATAATTT
tacactttatttttttatcttattatTGTATAGTATTTCTTTGTTTGGAT
gttttcgtttaaaaacatactctcgggtacctaatagccggggggggggN
Run BLAST on NCBI

transcript from alignment at scaffold_202:973328..984347+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051542 ID=TCONS_00051542|Name=TCONS_00051542|organism=Clytia hemisphaerica|type=transcript|length=11020bp|location=Sequence derived from alignment at scaffold_202:973328..984347+ (Clytia hemisphaerica)
ttttttttctgccgACTCAGATTTTTTTGTTCAGTTCAGCAAGTTAAGCA CACAACACAGCAGAAAGGTCTAGAAAGAACCAGACCAGCCACCACCCTGC CCTGCTACTCAAACACTGGTACACAACCTCTGACAACTCGGAAGTGAGAT GCATGtggcaatatatttttcaaaccaaATAACCACAATTCTGTTGCTGC TCTCCACTTCAGCAGGGATCGTTTTTTCGACAGAAATAACCACAAAATTA AAAGTGAGTACCTAGCTAGCTTATAAAGATTTATTCTCGAACTTTTGTTT TAATTGGTTTTCTATGGTCAATCCATTTTGGCAAGTTGATTACCTCTGTC CCCGTCAACCCAACTTAAGGGAGACTATATCATACAATCTTATCCTGTAG AGTAGATGTAGTCTGTCCAGCTGTGTGTCATCCAGTCCAGGGTGGATTTT GCAGACAGGCGTTCAGACGtaacttttgattttgattgaatttaatcatt attattattattattaatttatttgtcaacacaggtcaggttctatatac aaaacTATATATACAAGCTATATACAATTCTATATATATTGGCAGTAAAA ACTGATGTGGACCTGCAGgctaagaaacaaaaaagtaaaaccgCTGCAAA GGCGAAATGTGTTTTATGCAAAATAAGACTAAGGCTAGGTTAATTAAAGT GTGTCTGAGAAATTAATGAAGAGGATTTAGAATATGTAAATCAATAAcga tcgataataatcgaaggtGGTCCAGTGACATGACCACCAGTCCAGTGAGA GCGCAGGTAAACttgcctgcagggagatttttccctgcaatgcaggttca gcctgattggccagcttttggcatattacttagcagtacttttgcgcgca ttttgataatttcgatgtaaatgcgcataatttatggaaaaagctaactc tgcagaaaaaaggaaaacaaatgaaaatgaataatTATGGATTCATTTCg taacaaaatggctgttgactggaagtctaaatacatgtggatgatgtttt gatgtaatttttagtagttttgaaagtctttagctTGTGAagtttatggt aagttgattttgtgtgtttgcctgggtttttaaagttcagaaagtctgtc aacaagtttccaagaaaataaaataaacatgaTTCACTCGTTTtctccaa ccaatcagaatgcgTGATGATttacttgaggaaacccagggcaAACGCAC ACAAAATGACAGGGCTGTTACTGAAGGTCATCCTTATGACTGGGCTTCtt ttttttgtgctttggtttaatgtcaatgtttttggtttttcttaaaatat caaaatgatgctagtgtagtggtcatcgttCTTGTCTTCTGTGCTGGAGG TCAGGGTTAGATTACCACTTGGTGCTACAATTCACTTGGCATAcaattca cttggcaagtgaatgtaccctGGCCCGGGTCAACAACCCGTACCATATGA ggggaatagggtaccatcactttgttacaagagtatggggagaAAAGCCA AACATTTAATGTGGTGTGGTGATGGTACTCATGTTCAGTACCTGCAAGAA CGCAAGTATCATCATCAATACAGCACAGCTCTGATGTTGTTGCGTGCATG ACGTAACATGTGCAGCAAATAACTCACCTTCTGTGGGAAGATCTTTTCAG GTGTTTTAGCATTTCCACCCTCAAAGCAGCAGGTGCATCTGTCTTTTAGC AACTCCGTCCACCATTTTTGATGGCCTTGataatagatccaaaagggcgc cctcatcttggaagataatttgttttagTCTCCAGCTTTGgaaagtagca atgtttttggttacTTTAGATGGAAAATTGTAAGAAGCTtgagtttacaa gtgtcatttagtttctGCTGGCTGATAGAACGGCAGGATCCTGATGGATT TTCCTAACtctcaataacaatcaaagtactcaaaCGGTTATATCAAGTCT TcgaaaagttgttaaaaaagtGGTTGAATTCAAATCagatgttttttgaa attttggtactcaaaTTATATACctttaaaaaattgcatttaaaaaaagg ggggaatttttgtaatttttaaaaaataagggGACGGACCTCTTGCTTGA CCTAAGTTAAACTAGGACTACAGATATACCAGATACCCTTGTGTGGTTAA TTGTAggaaaaaattcttggaaaaaatCGTACCCATATCACTTTATAATG AACCCCCCTCCAAATTTATGACCTTTATGCTACGAAGTGccaaaattggc taaaaaccttcattttcctttagCAAAATCAGACCAATAGCACTTAATTA TGACCCcctattttgttgatttttatctggagtagccaccccctgcttat tccagcCCCCTGCAATTAACCACACAAGAGTACTGCTatcttttgtttgg ttttattcATTTatacaaaaagttttatttgtatCATTTGATTATAGGAT CCAGTTTATTTCcaatttatgatttctttttattgagTTTTATTTAGTTG GATATCATTAAGTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA GAAAATCATAATCTTTCAATAACTTCAATATTATAGAACATAGAAAGTCA AAACTTGAACATTATATAATAAACAAGGAATATAAGATATTGAAATCCCT AAACGACGCTAATGTTGGGTATAGATTTTATAAATCTTTATGTTTTATCA TTGTATCTTCTGTATGTATTATATGTTATATGAAAGTGTTATATATGTAC ATAGTAAGCTTGTTAGATGTTACATGTATATTATATTTTATGATTGATAG CTAGGTCTACCATCTTGCCCTCTGCAATGGAGATCACATGTTTGTGTCTG AGAGTCTTGATCTCCATTGTCCCCCCCCTGTGCACTCCTCCTTTGGGTCC TTGCTGGAAGAATGGGCCTGAGTGAGCTCTCCTCCCTGACATGTGTTTTT ATAAGAGCCTGTTCTCTCCAGCAAGGATGAGTGGAAGCCTGATCATAACA ATGAATGGATGAATCTCTTATACTGATATGTTAACACACGAGGATCAACT TAATATAATATGGAAGTAGGATTTATTCAGACAGATGTACCTTTTATGTT CAATATATTCAGTTTTTAAAGATAACATCATTTGGTCTCCACCATATTTT AAGATCAAAACAGACACCCAACATtggtagcagagggttgttatGGTGAT ATGGCAGGCTTCCTCTCATCAGCAACAGATAAACGTCACCACTGAAAATA CCCTTATCACGACAAAGAACATCTACCGCGTCAAAAGAGACATCCATGAG AACTCAGAAGCATCACTAAGGCTGGTCGGGAGGTCGCTCCAAGTGCTGAT GGTGGGTTAGGACAAAGAAACCCGGAGAGCATTGGTGGATCAAGGCTAGA CAGGGCCCATCTAGAAGGGGATCAAGCGGATCACGAGCTGAGCTGGTGTG TTGGCTACTGAAGTTTCTggagttgaaaaaaaaaaacacttctaTTCacg gtaaaaaaaaattttcataaaacttttgGACAGAGGTTTTGAAATAGTTA AAAGTCGTcggaaaacaaaagtgattgTGAAAAATGGTAGATGCACGTAT TGAACTTAACTTGGACAGTAAATTTTAGAACTCTCATGAATTTAACAAAC TTGATGGATCGTGGGAGACATAACAAActtttaaagtaattttgaatttt tatttgtttactgGTTACAACCAATATATCAGATCGAATAATGAATGGAA TGAGCGTGGAGTGTAAAGAAAATCTTGTTTGAGGAAATGTTCGTAGCAGA TTAATTTACCATTTCAATTGAGTAGGAGGAGGAAGGGTGTAGAAACAACA GACTGCTGTGCAAACCATCCTCTTTCCCCACCCTTGAGACTTGAGaaggt tttaaaatttcattgaattcgAATGTAAGCATGTGCTATAAGACAGGATT CCCTCCTGTTGACTTCTAATCCTGCCGCTGGCTTGGGAAGAtttgatttg ataaaatttgacaaatggacgagaaatgaaaattgataatgTTTAAATGA ACTGTGATGTAGGCCATGCTGAAAGAGAGGTGGACCGCCCGTACACCGGT CATAAATTCCTGTCGACTCCCAATCTTGCTTGTTTTGCTTGGGGAGATCT CATGTTTATGCTAACactatattttcttttcttcatgTAAATTATTTGGT GACATCAATGAATCACAATGGTGTTTGATTATGGAGCGATGTCGAGTTGT TGAGCAGGGAAATCGATTCAAGAACAATTCATAGAAAGATCATGGTGATT TACTTGCTAAGAACACactggaatgaaattttcattaattggGGCTTTTT GGATAATTTGTAACAAAACTGTCACCTATCATTACTAGCACTCTTGGTTG CAAAAACTAGAAATTTAGGTTTGCTATCATTTAAAGCATAGACAAATATT AAACAGATATAAgtgctttcaaatttttgatttttattaatGGGACATGG TCTGGATAACATGATAACATAGATAAAAGAAAACAGAACTTCCACTCAAA CACTTTGGTGAGAAAACGATACGAAATATATACTAGTAATATAAAATTAT GAATAACATTAGAGAATTATAAATTGTACTATAAATTCTGAAAGCccatt cttttaaaattagTACTATTTGGATAACAAAGTAACAAGCAGCTAGTGat aaaagtgaaaatttaatgaagttTTATCATATCGCGTTCCTCTTGCTAAT CAAAAATCACCCATCACCCATCACGTtacaaaattatccaaaaagtgcct attatatcaattttttgtaCCTTTTCTTTTGCGAGACTTAAGGTTTCTAC TTTTAAAAACTTCTCTCTGAAGGAAACCTATGAGCTTTTAAAAGTATTAT AGATATGGTGATACATGTGAAGAGGTATGAATGACAGTTAATTATGCAAG CTTTTTCAAGGtagcttttgaaaatgttacaTTATTATCCAATTCTTACC AAACAGTACTCCTTACTCTGCTAATTAATTTAAGAACATTAggtacaata aaaacatcaggTTTTAACTCAgatgaaatgttttttgatatCAATATCTG GATATTATGAAACAGCATATTGTGACCTTTAAGCTGTGTTACATCATTAT CCAGTGGGTATTTCAACAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTAA AGGGGAAAAAATTCTGTTACCAAATTATCCAAGAAGAACATTTCACCTTA ACCATCAGAATAATCTGACCTTTGATAAGAAATGGTAAACCACTAAAATG GATAATCTTGTAACATAGACATCAAATGTCACAGAAACCTCAAAAACTTG CCTTTTTTAATGAACATGTCCACCAATAGAATGTTGATGGTATTGATTTC AAACAATCGTGCTAAAAATCGTTGTATTTGTTGTTGTCAAACTTTTTATT TAAGGGGGCGGGCATTCTAACACTGGTACTGGTAATTTTCGTTCGATTTA TGGGGGCAGTTTCCTTTTTTAAGGGCAAAACTGCATTTTATGGGATGACT GAAAAAGTAGGCAGAAACCATGGGCTGAcggcattagaccaacttacagt acaTATTCCTATATGATCGAAATAAGAAGGGACGAGGGAGATGTGGATAA GAGCATTTGGGTTAAAATGCCAAAAGTTATTTGTTACCCTTTCTCTAAGA TAGGGCACCACAGAATAAAAGTCCTTTTAATATCTGTCATATTCCATATc cctttcagccttgcactccaaaCAGAAACTTACAGTAAAAGCTTAGTTAA GTTTAAGTTATTAAGTTTCTTTAATTATCTTTCTGCTAACATTGGCATtg tttaaaattatattttttaaatttatttatttttatttcagaaaccCATT TATGACAAGCAGACAAGCAGGTAATTGAATTTAAGCATTTTGAAATTCCA GTTATAATTTTGATATTAAAAATTTAGAATGTTCGAAAGAATTTTCTAAA TCTTGAAACAAAGATTTAATATATACTGTATGTAGTCCTGAGATAAGGTT TTTACCTTCGAATATAGCATGAATGCTTCCATGTTATGTCAACAGGGAAA TTTAATGTAAATATGAAAAAACATGCTACAATGCCTCGGCATACTATaaa gtaacttttttgtttcacttttttcattttagatgTCCAGAAAATGCATA CATGCATAGAGGGAGATGTGTCTGCAATTTTGGTGCTATCACTTTTGATG ATAATGGTAAATTTGTGTGTGAAAGATGTCTAAAATGTAGTGACTGCACT GGGACTCCATATTTATGTGGTAACTCAAAACCTTACCCATACAAAGGAAA ACCAACGTGCAGTCATCGATTTAGAGGCTATTACGTAAAGTTCGGAACAT TTTACGAATGCCGAAAACCATGTAATCCAACCCATAATGAAATTGAAGTC AATCCATGTGGTTGCCACAATCGCCTATGCAAATGCAAACCTGGTATGTA TCGTGATCACGTGTACAAGGAATGCACCAAACATTGCTCTCCTTGCACCT CAAAGCATCATGAACGTATTCCGGAGGAATGTGACTCTATGCCTGAAAAC GAGGTAGgtgttgaaaaacatttttaataagTTCCCTTTATTTCTAATCA GCAACACAGCTATTTTacttttccttttcaatttcttttttttcattgat ttctatcCTATNTTTTTAATAAGTTCCCTTTATTTCTAATCAGCAACACA GCTATTTTacttttccttttcaatttcttttttttcatcgatttctatCC TATTTACAGTGTGACTAACGCCTCACCACTTTAAATTTAGGAGTGAAGAC TGCGCTCTAGAACAATTTATAAACTTAAAATCATCAATGTTAATCTTTTC AAAAGGTTTCTGTTTTTGACCGAAAACTTTCTGAAGGCCTCTTTTATCTT CAAAAAATGGATTAAATTATTAGAATAAACTTCATTCTTGCAGAGCTACT GAAATATGGCAGCTTTGTTAGGGAGTAGATACGTTTTATGAAAGAGGTGG GATAGGAGTATGGATTCTGCatcagacccctctgcacactaggTGACTTC TTTGTAACAATGATTTCTTTCCTGTCAAGCTTAGGAATGATTGGGTTACC CTTGAAATCacaatttttcataactttcctTATCTATTCAGAGGTGCTCT GAACCTGAAAACTACAAGTCATCAACTTCCTCAAGCCCTCCATATACCAT TAAACCATCATTCACAAAAGACGAGTCTCCAACCACCACATTACCACTAG AAACAACAGAAACTGATAGCCCATCAACGACAGCGAACACTACAAATCAT CCATCCACAACATCATCAGACACTACAACTCGCATTTCTGTTACACACTC ACACACACCAACACAAACTGATATCACTGAATCTTCTAAAAACCCTAGAA ACATAATTGATGAACCGTCGGAGGCCACTCCTGGTGAACCTCCCACAGAC AACCCCTGGACCAACAACACTGTCATTAATGTACTTATTGTATTGGTGGT GTTTATTGTTGTTCTAATTGTTGCtgttgtgattgttttctgtaAGTTTT GATAAGTCAATTCCTTGATACAGAAatattcaagaaacttttttttttga atgtgtGGTTATGTGTGCTTATTAAAGGTtgtgtttttacataagtggtC CCgcttcatatcagacacatatttcatatcatgacagtgtcttcctattg ttatattgtgcagatataaacaaaaaatgttttttcttttagtctttctg accaatcttgctccacatccgtgtcaatccaatgtgaaaaagcttgtgaa ttgatgagtaagcaaaccaTATccctcttatttaaaaacaaaacctttat ataaaaagattctaaataaatataaatttacCTTTTATTTAATATTCATG CAGTCTTTTTACTCTCCTTTTCAGTCGTCTATGGCAAACCGATCAGAGAT TATATTTCTAAATATGGAAACAGTAACGACGAAGAGAACAAACCAATAAT GTTGGgtaattaatttaaatttattgtCATTAACCATGACCTATCTATTT GAACGTGTTGATCATAATGGGGAGGGAAAGTCTCAGCGCAGGTTGTATTT ATCTGATTTTCTAATTCTTTTTTaagatcaaaatttaaaaatttaaatct agGCAGAAATAACATTTAACAAATATACCTGTATGCCTGCTCACACATGT ACAAATGCCTAAAATATGAACATAGTATTAACACTAAGTGTTCTTTCCCC GAATTCCCTCGCTATGGTTTAATgtccttttttttcttcagatttgACAA ACATTGTGACGCTTTTGAATGCCAAAGTTTCAGTTGCTTTACAAGGTATG TCTTTAACCTTTTATTTCTAGAGTAAtgcactttttgaagaaaaaaagtt ggcCTTAGATTGGACGAATGGGGTTTTCTCCGGTGATACCCCTGGAGTAT CTCAAGACTTAAACTTACTTTCAAGAATCAATCATTGTCTCCCTTTTCTC AAAGAATGTAGATAACAAAACCGTAGGGGCATTAACTTCTCgcagaccca gtaggattttttcagccagtggggatgaaaataacgaactgaaactcgat ggggattgattttCTCATATtatttatggctggggatttaaattcttttg ttttcaagtcagaaattccagtggggatgggaaaaaatagcacaatattt tgcagtgaggattggtttatttgattattttcagtggggacaaaaattag agtttaattttccaccggggacgatattttggcaaattcttccagtggga agggttcccagtgggtctgagAAGGAGGTGTGTAGGGAGTACTTGCATGC ACTTCCGAAGCTATCTTCTTATATGGCAATATTTCTTATTATCATTATAA AGTTAATTTATCATCCCACATGCACCACAAATACTCATTGTTCAGCGATA CCGACAGTATTATGCATGTTAAATGACATGCACAATATATTATAAATTCT CTTTTTAGATACTATAATTATGGAATGGGGAACGAACATCAAAAATGCat tcaatcaaatttttaatGAGAGCAAGATTTCCAATGTCCGTGAGAGTTTT GCAGAAAGAGTCTTCGGTACCGAGTACCACCAAAAAATTGCTCTTTACGT TGACGGAGAAGGAGATcatcttttctattttctgaagGGTGAGAGACCAG AATATACATTATGCGATTTTATTGGTGATGTCTCAGATGTGGGAATTGAG AAGCATCTTATTGTCAAATTCATAAACGTCATCAAAGACTTATGACTATG CTTGATTaaaaataagtattttttaaaaatgatgaCTTTATCGATTGTCT GTCAAGCATGTTGAAAACCAAAGAATGCAGTACGTGAATTCAGAGACcag aacttgaaaaaaaaatcaatttatcaGACGTTTTCGTTACACGCTCGTCT TCATGTATAATAACATGCATGAAATAATTGGATTTTATGATTTAAAGTGG TATGCTCTGAAAAATTCAACAGCTTTTAGTCAACAGGATAAAGATTTGCT CCCAGTATTTTAATGATAGACCATTATCCTTTTCAGTTTAGCATTTATTG AGCTGTAAATAATGCATTATATTTCTAGCGAAacgaaaacttttttaaat attttctactGAAATAATTTtacactttatttttttatcttattatTGTA TAGTATTTCTTTGTTTGGATgttttcgtttaaaaacatactctcgggtac ctaatagccggggggggggN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032652XLOC_032652Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051542-exon-scaffold_202-1491911889:973328..973580TCONS_00051542-exon-scaffold_202-1491911889:973328..973580Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1510915933:973328..973580TCONS_00051542-exon-scaffold_202-1510915933:973328..973580Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1575043694:973328..973580TCONS_00051542-exon-scaffold_202-1575043694:973328..973580Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1491911889:980419..980447TCONS_00051542-exon-scaffold_202-1491911889:980419..980447Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1510915933:980419..980447TCONS_00051542-exon-scaffold_202-1510915933:980419..980447Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1575043694:980419..980447TCONS_00051542-exon-scaffold_202-1575043694:980419..980447Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1491911889:980710..981130TCONS_00051542-exon-scaffold_202-1491911889:980710..981130Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1510915933:980710..981130TCONS_00051542-exon-scaffold_202-1510915933:980710..981130Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1575043694:980710..981130TCONS_00051542-exon-scaffold_202-1575043694:980710..981130Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1491911889:981719..982118TCONS_00051542-exon-scaffold_202-1491911889:981719..982118Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1510915933:981719..982118TCONS_00051542-exon-scaffold_202-1510915933:981719..982118Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1575043694:981719..982118TCONS_00051542-exon-scaffold_202-1575043694:981719..982118Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1491911889:982502..982582TCONS_00051542-exon-scaffold_202-1491911889:982502..982582Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1510915933:982502..982582TCONS_00051542-exon-scaffold_202-1510915933:982502..982582Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1575043694:982502..982582TCONS_00051542-exon-scaffold_202-1575043694:982502..982582Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1491911889:982869..982922TCONS_00051542-exon-scaffold_202-1491911889:982869..982922Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1510915933:982869..982922TCONS_00051542-exon-scaffold_202-1510915933:982869..982922Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1575043694:982869..982922TCONS_00051542-exon-scaffold_202-1575043694:982869..982922Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1491911889:983586..984347TCONS_00051542-exon-scaffold_202-1491911889:983586..984347Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1510915933:983586..984347TCONS_00051542-exon-scaffold_202-1510915933:983586..984347Clytia hemisphaericaexon
TCONS_00051542-exon-scaffold_202-1575043694:983586..984347TCONS_00051542-exon-scaffold_202-1575043694:983586..984347Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:973328..984347 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.3813 17.3465 18.8849 19.8145 13.8057 12.2283 18.7459 20.8101 18.6275 24.7452 27.2542 16.6137 24.8994 21.5067 18.9531 24.9869 15.5099 14.6168 20.8467 24.2605 12.1235 10.8179 13.1278 15.9203 23.9759 26.9599 20.806 21.8279 17.8969 17.0469
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051542 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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