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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051737 ID=TCONS_00051737|Name=TCONS_00051737|organism=Clytia hemisphaerica|type=transcript|length=1483bp
CAGCTCCATCTTCAATCTATTAGCCAGCATGAGTTCATTCCATTCATTGG
TAGCCCGAATTTCCACACCAACAATACACATGACCTTTCCGTTGTATTCA
GATTGTGTGTTTAATTGCATGGCTTTCTGCATAAGCAAGATACTTTTGCC
AACACCAAATGGCCCACGTACCATCACTTTCTTGTGGCTAGGATCATCGT
TGTTCATTATTGCCAACTGTTGGCTTGAGTAAAATATGATGTTATGACTT
GTTGACACATTTTCGATAGCGTTGCTGGTGTATTCGACCCATCTGGAGGT
TGTAATGGGTGCAACTTGGTCTTTTTTCGATACGTGAATTGCAAATACCA
AAACTTTCAGGAGATCTTTCACTTCATACAAGGGATTTGATGTAGGTGTT
GTTTGCACGATTGGGAATTTGTTGAAGATACTGATTAGCCACGCCTTAAT
TTCAGTTTCCATGGTGACATAGTGCTGACTGTTGACTGACAGGGCGTCTT
TCTCAACGCAAACGACCGGGAAATAAGTCCAGCCTGATTTCAATTGATCT
CCAAGTCTCTCCTCAAAAATTCGATGGTTCGATTCCAACTGCTCAAAGAC
TTTCTCATCTGCAACTGTTCTTTTCAGCTCGACAGAGATTATGAGCTTCC
TTTGCCAAGATAtgattaaaaaatcaatttctttgtGCATcttacttttc
aaatttgtcaTGAATGTAAGGGATGAAAGAGCAACTGTGTCCCGGAGAGT
GTCATCTTTTAAGGCTACGAGCTGGTTATAAAACCAATGCTCCATCTTTT
CACCAGTGTCAGATAATTCCAATCCGAAAAGCCATTGAAGGTTTGAATCC
TCGGTTGAGTTGTTTTCAACCATTTGCTTGATTTGCTTTCTCAGGATCTT
TGCCGAAAGATTTTTAcagagaagtgtttttaaagcTGATGGGGAGGGTA
GCGCTGCGATAACGCTTTGGATGAAAACTCGAAGGTCTGACGTAGTTGGC
GGTAAGGTTGTTTGATCAGTCTTCAGCTCTACAATAGCTAAGTAGATGAT
TTGAAGATTCAATGTCCATCGTTGAAAATCCTTTGCATCAATACTTTCGC
CACCATGTTGCGTGCTCATAAAAGCTTCCAATTCTCTCGTGAACCAATTC
ATTggtgaattttgttttgaattatcCAAAAGTCTTCCAATGTCTTTTTT
GATGTCATAATCGAGGATAGCAGTAGAATATTTCTTGTATTGATTCGAAA
CGAATGTAGGAGGTATGAAAACACTTGAGTGTTCACCTTGAACGTAAAGT
GAACTGTCGCCATACTCCCTTTCAAGAACGAAGTCGGCTGCATCGATAGG
ATTCGCTGTGCAATGAGTGTTTCCCAGGTTGAACTGTTTGGCTTGTCTTT
CTGACGTCGATTGCCTGTTATTAAGAATCTGATGATACAACGATTTGTTT
GGGGTGCACTTGGTAACATCgattggtaatggt Run BLAST on NCBI protein sequence of TCONS_00051737-protein >TCONS_00051737-protein ID=TCONS_00051737-protein|Name=TCONS_00051737-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
PLPIDVTKCTPNKSLYHQILNNRQSTSERQAKQFNLGNTHCTANPIDAAD
FVLEREYGDSSLYVQGEHSSVFIPPTFVSNQYKKYSTAILDYDIKKDIGR
LLDNSKQNSPMNWFTRELEAFMSTQHGGESIDAKDFQRWTLNLQIIYLAI
VELKTDQTTLPPTTSDLRVFIQSVIAALPSPSALKTLLCKNLSAKILRKQ
IKQMVENNSTEDSNLQWLFGLELSDTGEKMEHWFYNQLVALKDDTLRDTV
ALSSLTFMTNLKSKMHKEIDFLIISWQRKLIISVELKRTVADEKVFEQLE
SNHRIFEERLGDQLKSGWTYFPVVCVEKDALSVNSQHYVTMETEIKAWLI
SIFNKFPIVQTTPTSNPLYEVKDLLKVLVFAIHVSKKDQVAPITTSRWVE
YTSNAIENVSTSHNIIFYSSQQLAIMNNDDPSHKKVMVRGPFGVGKSILL
MQKAMQLNTQSEYNGKVMCIVGVEIRATNEWNELMLANRLKMEL Run BLAST on NCBI transcript from alignment at scaffold_203:26892..28374 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051737 ID=TCONS_00051737|Name=TCONS_00051737|organism=Clytia hemisphaerica|type=transcript|length=1483bp|location=Sequence derived from alignment at scaffold_203:26892..28374 (Clytia hemisphaerica)
accattaccaatcGATGTTACCAAGTGCACCCCAAACAAATCGTTGTATC
ATCAGATTCTTAATAACAGGCAATCGACGTCAGAAAGACAAGCCAAACAG
TTCAACCTGGGAAACACTCATTGCACAGCGAATCCTATCGATGCAGCCGA
CTTCGTTCTTGAAAGGGAGTATGGCGACAGTTCACTTTACGTTCAAGGTG
AACACTCAAGTGTTTTCATACCTCCTACATTCGTTTCGAATCAATACAAG
AAATATTCTACTGCTATCCTCGATTATGACATCAAAAAAGACATTGGAAG
ACTTTTGgataattcaaaacaaaattcaccAATGAATTGGTTCACGAGAG
AATTGGAAGCTTTTATGAGCACGCAACATGGTGGCGAAAGTATTGATGCA
AAGGATTTTCAACGATGGACATTGAATCTTCAAATCATCTACTTAGCTAT
TGTAGAGCTGAAGACTGATCAAACAACCTTACCGCCAACTACGTCAGACC
TTCGAGTTTTCATCCAAAGCGTTATCGCAGCGCTACCCTCCCCATCAgct
ttaaaaacacttctctgTAAAAATCTTTCGGCAAAGATCCTGAGAAAGCA
AATCAAGCAAATGGTTGAAAACAACTCAACCGAGGATTCAAACCTTCAAT
GGCTTTTCGGATTGGAATTATCTGACACTGGTGAAAAGATGGAGCATTGG
TTTTATAACCAGCTCGTAGCCTTAAAAGATGACACTCTCCGGGACACAGT
TGCTCTTTCATCCCTTACATTCAtgacaaatttgaaaagtaagATGCaca
aagaaattgattttttaatcaTATCTTGGCAAAGGAAGCTCATAATCTCT
GTCGAGCTGAAAAGAACAGTTGCAGATGAGAAAGTCTTTGAGCAGTTGGA
ATCGAACCATCGAATTTTTGAGGAGAGACTTGGAGATCAATTGAAATCAG
GCTGGACTTATTTCCCGGTCGTTTGCGTTGAGAAAGACGCCCTGTCAGTC
AACAGTCAGCACTATGTCACCATGGAAACTGAAATTAAGGCGTGGCTAAT
CAGTATCTTCAACAAATTCCCAATCGTGCAAACAACACCTACATCAAATC
CCTTGTATGAAGTGAAAGATCTCCTGAAAGTTTTGGTATTTGCAATTCAC
GTATCGAAAAAAGACCAAGTTGCACCCATTACAACCTCCAGATGGGTCGA
ATACACCAGCAACGCTATCGAAAATGTGTCAACAAGTCATAACATCATAT
TTTACTCAAGCCAACAGTTGGCAATAATGAACAACGATGATCCTAGCCAC
AAGAAAGTGATGGTACGTGGGCCATTTGGTGTTGGCAAAAGTATCTTGCT
TATGCAGAAAGCCATGCAATTAAACACACAATCTGAATACAACGGAAAGG
TCATGTGTATTGTTGGTGTGGAAATTCGGGCTACCAATGAATGGAATGAA
CTCATGCTGGCTAATAGATTGAAGATGGAGCTG Coding sequence (CDS) from alignment at scaffold_203:26892..28374 >TCONS_00051737 ID=TCONS_00051737|Name=TCONS_00051737|organism=Clytia hemisphaerica|type=CDS|length=1482bp|location=Sequence derived from alignment at scaffold_203:26892..28374 (Clytia hemisphaerica)
ccattaccaatcGATGTTACCAAGTGCACCCCAAACAAATCGTTGTATCA
TCAGATTCTTAATAACAGGCAATCGACGTCAGAAAGACAAGCCAAACAGT
TCAACCTGGGAAACACTCATTGCACAGCGAATCCTATCGATGCAGCCGAC
TTCGTTCTTGAAAGGGAGTATGGCGACAGTTCACTTTACGTTCAAGGTGA
ACACTCAAGTGTTTTCATACCTCCTACATTCGTTTCGAATCAATACAAGA
AATATTCTACTGCTATCCTCGATTATGACATCAAAAAAGACATTGGAAGA
CTTTTGgataattcaaaacaaaattcaccAATGAATTGGTTCACGAGAGA
ATTGGAAGCTTTTATGAGCACGCAACATGGTGGCGAAAGTATTGATGCAA
AGGATTTTCAACGATGGACATTGAATCTTCAAATCATCTACTTAGCTATT
GTAGAGCTGAAGACTGATCAAACAACCTTACCGCCAACTACGTCAGACCT
TCGAGTTTTCATCCAAAGCGTTATCGCAGCGCTACCCTCCCCATCAgctt
taaaaacacttctctgTAAAAATCTTTCGGCAAAGATCCTGAGAAAGCAA
ATCAAGCAAATGGTTGAAAACAACTCAACCGAGGATTCAAACCTTCAATG
GCTTTTCGGATTGGAATTATCTGACACTGGTGAAAAGATGGAGCATTGGT
TTTATAACCAGCTCGTAGCCTTAAAAGATGACACTCTCCGGGACACAGTT
GCTCTTTCATCCCTTACATTCAtgacaaatttgaaaagtaagATGCacaa
agaaattgattttttaatcaTATCTTGGCAAAGGAAGCTCATAATCTCTG
TCGAGCTGAAAAGAACAGTTGCAGATGAGAAAGTCTTTGAGCAGTTGGAA
TCGAACCATCGAATTTTTGAGGAGAGACTTGGAGATCAATTGAAATCAGG
CTGGACTTATTTCCCGGTCGTTTGCGTTGAGAAAGACGCCCTGTCAGTCA
ACAGTCAGCACTATGTCACCATGGAAACTGAAATTAAGGCGTGGCTAATC
AGTATCTTCAACAAATTCCCAATCGTGCAAACAACACCTACATCAAATCC
CTTGTATGAAGTGAAAGATCTCCTGAAAGTTTTGGTATTTGCAATTCACG
TATCGAAAAAAGACCAAGTTGCACCCATTACAACCTCCAGATGGGTCGAA
TACACCAGCAACGCTATCGAAAATGTGTCAACAAGTCATAACATCATATT
TTACTCAAGCCAACAGTTGGCAATAATGAACAACGATGATCCTAGCCACA
AGAAAGTGATGGTACGTGGGCCATTTGGTGTTGGCAAAAGTATCTTGCTT
ATGCAGAAAGCCATGCAATTAAACACACAATCTGAATACAACGGAAAGGT
CATGTGTATTGTTGGTGTGGAAATTCGGGCTACCAATGAATGGAATGAAC
TCATGCTGGCTAATAGATTGAAGATGGAGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051737-exon-scaffold_203-1491911889:26892..28374 | TCONS_00051737-exon-scaffold_203-1491911889:26892..28374 | Clytia hemisphaerica | exon |
| TCONS_00051737-exon-scaffold_203-1510915933:26892..28374 | TCONS_00051737-exon-scaffold_203-1510915933:26892..28374 | Clytia hemisphaerica | exon |
| TCONS_00051737-exon-scaffold_203-1575043694:26892..28374 | TCONS_00051737-exon-scaffold_203-1575043694:26892..28374 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_203 | supercontig | scaffold_203:26892..28374 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027417 | P-loop_NTPase |
Blast
The following BLAST results are available for this feature:
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