TCONS_00052852 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052852
Unique NameTCONS_00052852
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2398

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052852 ID=TCONS_00052852|Name=TCONS_00052852|organism=Clytia hemisphaerica|type=transcript|length=2398bp
CTTGAAATTCAGAAATAAAGAAACATGTTTTGTAAGAGTTGTAACAATCT
AGATTTTCAAGTCTGGTTAGTTTGTTTTTGCCAGAAATGTGACAAGCCCT
ATGTTTTCATTGTCATTAGCATAGAAACAACAACCATATAGAACTTATAC
TCAGAGTATCTTAACACATTTCTTGTCAAGCAGCAAGCATTATAGACGTT
CTATTTAGAGGTTgaagtttattatttttgttagACAACAATGGGTTTCG
GTGAAATATCAGTGCATCAATGTCGACAGAAAAGCTATCTCTTCATCTTT
ACAATTGCTTCTTGTTTCCAAGTCATAATATCATCGTGTATTTTATTTGG
TTATTCGTCATTACTGGTCATTTTCAAAGACTTACGACTTTACAGAACCT
CTTGTGTGGAGAACCTTCACGCACAAAACACAACAACTTTAATGACCTTA
CAACAACAAATACCAAACCAATCATGTACGGCTAGGGATGAAGCTCTCAA
TTTGCCGTTTGCTGTTGgtgttattttcttttcagtGGTCAAAATACCAC
TTGGAAGTATTATTGATTCTTTTGGTGCAAAATCGTCACAATATATTGGA
TGTTGCACTCTGATGCTGTTTGGTTTAAGCATGGCTTACATTGAAGAAGG
CAAAGAATATTTGTTATTTATCTCGTTCGTTTTTCTTTCCATCTCATCCT
CCTTGTTAATGCTATGTCCATATCAGgtGTCGAATATTTTGTTCGTAAAG
AATagagcactttcactttcgttatTGAGTGGATGTGTGGACGGCTCGAc
ggtcattttcatcatttttctgGAAATTTATCAGAAGCATATCACGTTTT
CAAGTATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTGATGATT
GCAACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTTCATTGA
TGTTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATGAAGATA
CAGATGATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATGCGATCT
CAAGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTACCATGA
AGCAATTCACAAATCGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAA
CATTGTTAGCCAGTCTATCTGAAAATCTGGCTATACAGTTTTCCAATAGA
AGTTACGATGCAAACGATCACAAGATACAGTATTTACCGAGCCGACCGTA
CGGTACGATTATGGAAGGGTCTGTTGGCTATCAACAAGATTCTTATTCTG
CGTCATCACACCTTGTATTCAACATAAAAAACAATAAGGAGGACGAAAAG
ACGCTCCTGTTACCAATTCAACCTACCAGGGAAGAGCACCTGACCCCCTA
CTCAGGACATAAACTACGGCAATACATCTTTTCGAAGTTGATGATCTTTG
GCACATACACAGCTAGTGTGATGATGTTCAAGATTGTTTATTTCATCGGA
AATTTGGACAAATATCTTAACAAATTGACCGATACTGAGACAGCAACTTT
GTatatcaaatattttggatatgTTCAGTTCGGTGGAATTATCGCTGCAC
CGATCTGCAGTATGTTATTTCGTGAGAATGTGGGAACCGAAAGATTATCT
GCTCATCAAGATTTcgttaaaaaagtcaaaattttaatCCTTCCTGGTTT
TCTTCTCATCTTGTTCATCGTGCTTATCGATGTCTTACAACTCGTTCAAA
ACATTTATCTATCGgTTCCAATTTTCATTCTGTTTTTGTTTGGGAACAGT
TTGGTGTGGTGTTTCACTTCATTGTACTTCGCATATCTGTTTCCGGCCAA
GTACTACTGCACCTTGTATGGCATCGCAACGGGAGTATCTGGAGCTGTCT
CTTTCCTTCAATATCCGCTTCTTTCTCTTGAAAATTCTCTTTTCCACGGA
GAACAATTCTATACGAACCTTCTCATGTTGGGATTACTTATATCAACACT
GGTGCTTCCATTCTACTTGGTgtatttctacaaaaaattgaaaatggcgG
AAATTGAAACTCAAGAAAAACCTTGACAAGTCTGATATGAATTTCAAGAT
GTATTTGTTAAGTTGTTAAAACttgtgaaattattttttggcttaaacTA
GTTCCTGGTtatttgatcaaaaagttttgtGTATATGAAATGTGAGTATA
TTGAACTGTACTCATGATagtttaaaaagattttggcGGATATTTTTATT
CGCGAGTTTTAAGATTTTAACATTCAAAAGCTGATTTGACTTATTCCTGA
GTTAATTATTTGTGACCTAATTACCTTTTACAGGAGAAGTATGAAATCGA
TTGTTTCCCcgattttaatgttttcatttattttcgaAACCTACGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_220:178327..190053-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052852 ID=TCONS_00052852|Name=TCONS_00052852|organism=Clytia hemisphaerica|type=transcript|length=11727bp|location=Sequence derived from alignment at scaffold_220:178327..190053- (Clytia hemisphaerica)
CTTGAAATTCAGAAATAAAGAAACATGTTTTGTAAGAGTTGTAACAATCT
AGATTTTCAAGTCTGGTTAGTTTGTTTTTGCCAGAAATGTGACAAGCCCT
ATGTTTTCATTGTCATTAGCATAGAAACAACAACCATATAGAACTTATAC
TCAGAGTATCTTAACACATTTCTTGTCAAGCAGCAAGCATTATAGACGTT
CTATTTAGAGGTTGAAGTTTATTATTTTTGTTAGACAACAATGGGTTTCG
GTGAAATATCAGTGCATCAATGTCGACAGAAAAGCTATCTCTTCATCTTT
ACAATTGCTTCTTGTTTCCAAGTCATAATATCATCGTGTATTTTATTTGG
TTATTCGTCATTACTGGTCATTTTCAAAGACTTACGACTTTACAGAACCT
CTTGTGTGGAGAACCTTCACGCACAAAACACAACAACTTTAATGACCTTA
CAACAACAAATACCAAACCAATCATGTACGGCTAGGGATGAAGCTCTCAA
TTTGCCGTTTGCTGTTGGTGTTATTTTCTTTTCAGTGGTCAAAATACCAC
TTGGAAGTATTATTGATTCTTTTGGTGCAAAATCGTCACAATATATTGGA
TGGTATGTACCCCAACCTGAAACAAATTGTGTTTTTATTGTCTTTGACAT
TTTATTCCTGTTGAGATGGTTCCACATGAGTCTTTTAAGAAAGCGGCGAA
ATTCTGGTAAAAAACTTCTTATTACCCTCCCTCGTCAACCTCGTTCTCTT
TTAACTATCCCAGCTCATACGCTCACTTTTACCACGGTATATCGTTTCAA
ATTTGTGAACAAAATATACTCCCTTACAATACAAAGTCCTTTATGAACGA
TTCCAGTGTTCGAGTTCGGCTACCAAGCGGACCTAGCTGTAACACCCAAA
TTTGTCTAATCTATCCCAGTTGGCACCAACGTTGTTTCAACGTTTATGTT
CATAACGTCTATAAAACGTTAGGTGAACGTTGAAAAAACGTTGTGTTCCA
TCTGAGAAAGCTCATCTTGAAGTGGGGGTGTACAATATTTCCGAATTGCG
GAAATCGACCCTTTTTTCTTCGGAATTTCGGAAATCGAGCAAAATTCCTT
CGATATTTCGGAATTCCGAAATTGTTTCAGTATTGGAAATCCATTTAATT
TGGCTTCGAAATTTTGGTATTATAAAGTTTTTATCTCCCTTTTTCGAAAT
TCATACATAAAAAATCAAATTTGATAAAAAATTAGTCAAACGAGGAAAAA
TACCCAAAAAATCGGTATCGGAACTGCAAGTATTTTTTTTACGGAATTTC
GAAAATTTTGGCAAAATTATTCTGTATTTTGGAAATCGTAAACCCGTACG
CCCACCACCTTGAATTGTATATTTATGGTTATTTCTATGTTTATTTTATT
TTTTTAAACACATTTTGCTCCCGTCTCCTATTTAGATAGGTGTGTTTACG
CAACTTTCTTCTTCTATTTTAGTTGCACTCTGATGCTGTTTGGTTTAAGC
ATGGCTTACATTGAAGAAGGTAATTTTTTCTTCGTAGGATACGTCCACAG
GTTAGAAATCTTTCGATATTTTGCTTTTACTTTACGCTTATCGTTCATTT
TCTCTTTTCAGTGCATTTTATAACAAATCATTTTTTGATCGAATATCTTT
CCCCGTACATTTTCACAGTCGATTTCTGTCTACTACAAAGAAAATTATTT
ATTGAGAATCTTCCAAAGTAAAATAACAGCAGTGCTTTCCCTGACCCAAC
CTTTGATTACTATTTTGACGAAATTCCTTTCCACTTTGAGATTTCTTTGA
ATTTCTAAAAATTTTATTTTAAATCATTATTTTATATATTCGTCTATTTA
TAAGTTTAGGATGTTTGATGGTTTTGTAGTTTTTGAAAAGTCAAGTCTAA
TCAACAGTGACGACCCAAAGGGTGGTAAATGTCTCAAACATAAACAGACA
GTGCTCTCGAAAATAAAGTTATTTTTATATAAAGTAAGTTTCTTGAATCT
TCAAGAAAATAACGAGAAATGAGAGATAAATGAATAAAGATTAGCTGCAG
TGAAAAATCGTGCCCAGTGAGAAAAATACCGAAAAATTCCATCCCTATTG
GAAACCTTACTAGAAAAGAGACCATGATTTTGCAAATCCTCCTTGGTGTT
TTAATTTGAAAATGATACAATCTTAAATACTACTTGCGACATCTAAATTT
CTTTGATGTTATGGTTTTATGCGTGTTAAAACGTCCCAGGGTGACCATGA
AAATCTTAAAATTTCACACGGGTTTGATTTACAGGTCTCAAAATCTCATC
AGAGCCGATGTGACCGGATGACTGATACAGGAGTGTGTTAAAGGTTAAAA
TATTTTCCTCGGGTCAGGATAAAATTCATATTGAAATCCTTATGGGAAAA
TAAATTCTATTGTTTCAAGGTTAAAAAGTCATTGAATTTCGAGCGGGATG
AAATCAAAGTCGTTTTCCAAGTTGGAATGAAATTTAAGAGTATTTTCCCA
TCGGGAACGAAATTTTGGCCAAATTTTCCAGTGGGGCTTGGATCCCAACG
GGTTTGACACAGTAGTGCAGACAGGGTTTTGCTTAGAAGAAGCTTTATAT
TTAGCTAATTCTTATTTGATTATTCACTTACTGATACAGAACTCCTTATC
GCTTTATATTTCAGGCAAAGAATATTTGTTATTTATCTCGTTCGTTTTTC
TTTCCATCTCATCCTCCTTGTTAATGCTATGTCCATATCAGGTTAGTATT
TTACAAAACTACAACATGATGTTTCATTGGCCGAGAGGTAATAACATATA
TAAAAGTAATTCAGGAGAAAGAAGATAACCCTGATTGACTAGTCATTGTG
CAGGGCAGTGAAAATAAATGCTAAAAGTTTCATTTTACGTCATAAAACAG
TATCAAGAAAATCAAGAGAAATATTATCCCGTGTCTTATGTTTTACGTTT
TACAGTTTGGATTATGGAATGATTCGAATTATTGTAAGTACAATGAGAGT
TTCCCTATGACGGGAACACAGTGTTATTTGTAGTATAATGAGTCTTTGAG
GAAGTTTATTCGACTTGTTAGACATCCAGAGAAATGGGGGAGATCAGTCA
TCGAGGTATTAACTGATGCCTTTGTTTTGATTTTAGGTGTCGAATATTTT
GTTCGTAAAGAATAGAGCACTTTCACTTTCGTTATTGAGTGGATGTGTGG
ACGGCTCGACGGTCATTTTCATCATTTTTCTGGTGAGTCTCTTTATTCAA
TTAATCAACAAAAAAATATCTAGCCCAACAGTCAGTTATTTTCTAGATGA
TTAGTAGAGAAAGGAACAGGGCTTTTGCCTAAAAAGACATAATTTTGGCA
ATAATCTTTCCAATTGAATAAGAGATTCCAAAATGGACACGTGTTTTTTC
GAACGTTTTTTAAGGAAGTCGGGATGTTTTCGGAAAAACAAGGAATTGAT
ATTGGGAAATATTGGGAAATACACGCATTCAAATGAAATGCGAGCCCTGT
AAACTTGGAACCTCAATAATTACATCGTTTTTTTTCTGCTGTATCTATTT
TGTTCCAATACAGTTGTCTTTTATCAGTCACTTCCTCCCATAGAAAATGA
TGGATGCATTGGATGCAAAAATGCTCCATTTACCTAAACCTTAAAGTTAC
TTTGTTGAATGATTCTTGAAAATATTGGATATATTTTATTTTGGTGTTAT
GGACTATTGTATTGTATGGTATGTTTTTGGTTTTATAAGTTGCATTCGTT
GAGGTAAGCATGCAACGCGAGGGGTAGTTTACTGATGAGCACTCATGTGT
CTATCTTATAGATATAAATGGGGGTCGGGACTCAGAGTTTGTAAAACAGG
CTTTAGGAAAAGGGCGAAGGGTTTTATTATTTGGTTTTCATTTTTTGTTC
AAGGGATTTGATAAGATAGACACAGAAGTGTTTCAAAAACAACAAAAACG
AAAAAACAAACATTTTCGGAACATTTGGCAAATGAAAAGTAACATTACCC
CTCTCACACAATTTGTTTTGGACTTGGAGCTGGATGGAATTGAAATAAAT
GGGCTTGAACTGGAAAGCCTACACACCAAGAATCAAAAGATTTTAAGAGC
TTTACAAAAAAGTTTTTCAGACGTCAGACGTCTATGATTAGCAAATCTTA
AAAACCGATGTCGGCTATTATTTATCCGACATGAGCCTTTTGTTGGTAAG
TATAAAAAGCTAATAAAAAATGACCACGACATTATGCATAGTGTGAAGGT
CACTAAGCTAACCCACGTTGTCACAAAAGACCATGGTCCCACTGGGAGAA
GAATACTAAATTACAAGTAGGAAGGGGTAAATAGATCCTTTGGCTAAGGG
GATTCTCATCTTAAACCATGGTCTTATCTCCGCCATTTTTTTAATCATTG
GATGACTTTTACCTTACTTTTTTATCTTTTTAACAGGAAATTTATCAGAA
GCATATCACGTTTTCAAGTATTTGTATATCGTATGCTGTTGGCGCATCAT
GTATATTGATGATTGCAACAACATTTCTTTATCCAACAAAGGAAGTTCTA
CAAGCGTTCATTGATGTTGAGACTGTTAACAACATTCGTCCCCAGCTCTC
TGATGATGAAGATACAGATGATGAAAACCTTGTTGATACAGCATCTTCTC
ATGTCATGCGATCTCAAGATTTCGCTTCTAATTCTATTATGTCAAGTTAT
CAGATGTACCATGAAGCAATTCACAAGTAAGCTAGCTAAAACTTTATATC
AAATCAAATTTGTATGACTCAAAAACTGACGTAACAAGTAAAACCAGTTG
ACTCCAAAAATGTGACGGGATTTCCCGAAACCACTTAAAGCCGGTCTCCA
CTTGCACGCACTGCGATCGCACTTTTTGGCTTCCATCCATTTTTCTTGGA
AAAAAAATACTTCATAAAAATATAGCACGCGCTCGAAAAATTAACCGTCA
CGTCAGATTGCACCAATGGAGTTGCTACATTTTTCTTTTGACCAATAGCG
TGGAAGCTTTGCTCGAAAAAGTGCGATCGCAGCGCGCGCAAGTGGAGACC
GGCCTTTATACCAATCGGAAGCTCTCAAAATCGATATAGAGGACTTTTAA
GTGAATATAGTCGACTTCCCAATCTCGAGAAAATTTAAGTCAGTTTTGAC
GTCATTTCCATTCGATTTACTCGAGTTACGCTCTAGCTGGCAGTAATGTT
TTTTGACAGATTTAATTAGTCACCTATATCTTCTTTGTTTAATAAGCATT
GTACTAACATCTTCTCTTCATTTGGTATAAAACACTTCAACTATTTTTCT
TCACTTTTCTTCAGATCGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGA
AACATTGTTAGCCAGTCTATCTGAAAATCTGGCTATACAGTTTTCCAATA
GAAGTTACGATGCAAACGATCACAAGATACAGTATTTACCGTAAGTATAG
ACCTTTTCATAAATTACGTCACGAATATCACTTGCCTCGTTTTGAAATCA
TGACCATGGTGATTAACTCCCAGCGGATTTTATTAAAACTACCTCCTATT
CATAAAAGAATCGTTTAATGTCTCAAGGGACATAATCACCATGGTAATTG
TTTGAATACGAGGCAAGTGATGTTCATGACGTAATTTATGAAAAGGTCTA
TTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAG
AATCGTTTAATGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATA
CGAGGCAAGTGATGTTCATGACGTAATTTATGAAAAGGTCTATTCGGGAT
AATTCTTATCAAGTGCCGGATCTAAAGAGAGGTTCAAAATTTATAGCGGT
GAGTGCTTTTGTAAGGGCTATAATCCTTATCCCTAATAAGGAAAAAGTCT
TTGTGATAGACTTTGAACCCCCTCAAATCTGCCACTGTCATCAGTAGAAC
TAACCCACGATCCTAGTTTAACGTTCACATAACGTCAAGGACGCAATCTA
TGGAACTGTTTTCACTTTCCGTCGGCTGTAAATCTTACTGAAGAAACCTG
TCAATCAGATTGAAATGGCTTATTGGTCCAAGTTGCGTTATTTCAGAAAT
GTCACCCAGATTAGGGTCTTTTTAAGTATGATAGATTTTGCCTAATTATG
GTTTTTTTATTGATTATTTGACATATTTCCTACTAGGAGCCGACCGTACG
GTACGATTATGGAAGGGTCTGTTGGCTATCAACAAGATTCTTATTCTGCG
TCATCACACCTTGTATTCAACATAAAAAACAATAAGGAGGACGAAAAGAC
GCTCCTGTTACCAATTCAACCTACCAGGGAAGAGCACCTGACCCCCTACT
CAGGTAAAAGCTGTTTTTCTTTCAGCGTTTATCTTAAATACACGTTTTTT
TTTATAAGAACAAACTATATAAGAACATAAGGCTTCGATGGCCAAATTCT
TAAGAACAAGTCAAGAACATTTTAAGCTTTCGTGGGCTCTAGAACACCCA
ATTTTTTTGGAAAATGGTCAAAAATACTAAAAAAATAGCGAAAATAAGAA
CATGTTTAGAACATTTTTAGGCCTGAAAGTAAAAAGTTTAAGAACATCCG
AAGGTTTCAAAAACTTTTGATGTTCTTATGAAAAAAAACGTGTACCATTA
GTTTGGCTGACGTTTTAGTAGCTTAACTCAAGCTAATCTACACTAAATGA
AGATTTTTATTTGGATAGAAATCTTTTTTCAACTATCTTTTTAGGTATTT
ACTTGAATTTGTTTCATTGATATGATTCTCAAGTTTCGGCTAGATGAATT
GTGAATTTTATGGCTGACTTTTTTCATTTTTCTGTATTTGAAGGACATAA
ACTACGGCAATACATCTTTTCGAAGTTGATGATCTTTGGCACATACACAG
CTAGTGTGATGATGTTCAAGATTGTTTATTTCATCGGAAATTTGGACAAA
TATCTTAACAAATTGACCGATACTGAGACAGGTAACCTTTGTTTCACTAA
TTTATAGGATACATGTTTTTCCTTTTATAAACTCAATCGGCTTGTTCCTA
ATTTTGTCAGCTTGTTAAAGTATATACACTTTGATTTAATTATTTCCATC
TTTTAGAATGCTAATCTACTACTGTAATATCGCTTAAAAAAACAATTTCT
TCGAGAGACTTTTTTGTCTAACACAGTCCATACCCTGACCCTACTGCATA
AAAAGACGTATGACTACAAAAATATTACCTTCGCTTGAGCCCCTTAGCAA
TAAATAAAATTACTAGAGTTTGTAAGCTTCGTCGCGAACCAACATTATCC
AATAAGACTCGTAACTCACAACCATAGGGCATAGCATTGGCGGACAATAG
CTTTTACCCCCCGGACAAGCATCTGCTGACCCCCCGGACACCCCAAATTA
CCCCCGGACAAGGCAAATTTTGATGATTTTTTGCTACCCCCCGGACAAAA
TATCCTCCACCCCCCATGTACAATTTTTTTCTGGAAGAGCCCAATAGTAA
TTCATGTGTTTTCCCACTCTCTCATAGCAANCATAGCATTGGCGGACAAT
AGTAATTCATATGTTTTCCCACTCTCTCATAGCAACTTTGTATATCAAAT
ATTTTGGATATGTTCAGTTCGGTGGAATTATCGCTGCACCGATCTGCAGT
ATGTTATTTCGTGAGAATGTGGGAACCGAAAGATTATCTGCTCATCAAGA
TTTCGTTAAAAAAGTCAAAATTTTAATCCTTCCTGGTTTTCTTCTCATCT
TGTTCATCGTGCTTATCGATGTCTTACAACTCGTTCAAAACATTTATCTA
TCGGTAAGCTGTTACAACTTTTTTATAAAAACTATTTGGGGGGAGGGGTA
CTACCTTGCCGACCGACGGTGTGTCCGCTGAAGTTAAAAAAATGGACCCT
ACATTGGACTCGTTTTTTTTTACATTTTGCCAAAGTTTTCGAAAAAGTGC
CCTTGAATGGGATTAAAATTTCGACCATACTTGGGACTCATTGAGGTGAA
AAAGGTATCCTGACCAGTACATCCCCGTACCCCTTTTTGCCCAAGTACCC
CCGGGGAACTATTTCTTATAATTCAGTCAAAACTTATAAACAAATCATAG
ACAATTGAACCCTTCATAACTTCATAGACCTTAAGTGTGAAGAAACTAAG
CATAAGTCACTTTTTCGAAAGAGATCCTTGACATTAGGGGTATGTTTTCC
ATTTAAAAACTTCAATTTTCCTGTTATCGATAACTATTCCTAGATTCTTC
AAGTGAAATAAACTTCTTTTTTTCAGGTTCCAATTTTCATTCTGTTTTTG
TTTGGGAACAGTTTGGTGTGGTGTTTCACTTCATTGTACTTCGCATATCT
GTAAGTAGTTCCCCTTTGAATTACAGTGGAGTTTTCATAACTCAAACTTT
TATAACTCGAAAGACTCCTTAACTCGAACAATGCCTTATAAACTAAGCTC
CGTAACTCGAACTTCCTTAACTTGACAAAAATTGTATTCCTTGTGCGTAT
TCGAGTTACGAAAACTTCACTAGGTTTCAATCCTGTTAGAAGTTGCCTCG
GAAGTAAACCCACCTAAAACACATCCCAAACCAGCTGTCACTCCCTCCAG
GACCTAATAAACTAGAGAAATCAGTCTTTAAAACCACTGTAAAACACCAA
AGACCCTTAAAAAGGTACATTGATTGACGGTTATTATATTGTAACGCTTT
TTTCTTCGTATTTCAGGTTTCCGGCCAAGTACTACTGCACCTTGTATGGC
ATCGCAACGGGAGTATCTGGAGCTGTCTCTTTCCTTCAATATCCGCTTCT
TTCTCTTGAAAATTCTCTTTTCCACGGAGAACAATTCTATGTAAGTCTTC
AAAACCAAAAACTCGAACCCAGTCCCTTAGTTTTCTTTTCATGACTCCAA
AAGTTTCATATCAAGTCCATCAATAAAATCAAAAAAAAGTTTTACCCTAA
TAATCGTCTACTATATTGAAATATTAACAAAGGGCAATTCTTTTTGAGGA
AAATCTCAACCCTTAGTTTAGAATATAAATGCTAAGGTGAATGTATGTAA
CTTTGGTAAAATCCAATGGGAGGATATTAAGGGAAGCATCCAGTATTAAT
TGATTTTGGCATAACAATGAAAACTTTATAATAATTACAGTTAACTCTCG
CTAATTCGAACTCGATCCTCAACTCTAATTTATTCGAATTCAAGAGAGAT
TCGAATTATAGAGAGTAAGTTTCTCCTTGACGGTAACTGACAAAAAGTTC
GAATTATAGAAAGATTTCGAATATAGAAGTTCGAATTGGCGAGAGTCTAT
TGTAGTTTTAAAAGCATATATAATTTTTCTTCTCTATATAGACGAACCTT
CTCATGTTGGGATTACTTATATCAACACTGGTGCTTCCATTCTACTTGGT
GTATTTCTACAAAAAATTGAAAATGGCGGAAATTGAAACTCAAGAAAAAC
CTTGACAAGTCTGATATGAATTTCAAGATGTATTTGTTAAGTTGTTAAAA
CTTGTGAAATTATTTTTTGGCTTAAACTAGTTCCTGGTTATTTGATCAAA
AAGTTTTGTGTATATGAAATGTGAGTATATTGAACTGTACTCATGATAGT
TTAAAAAGATTTTGGCGGATATTTTTATTCGCGAGTTTTAAGATTTTAAC
ATTCAAAAGCTGATTTGACTTATTCCTGAGTTAATTATTTGTGACCTAAT
TACCTTTTACAGGAGAAGTATGAAATCGATTGTTTCCCCGATTTTAATGT
TTTCATTTATTTTCGAAACCTACGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033388XLOC_033388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052852-exon-scaffold_220-1575043694:189452..190053TCONS_00052852-exon-scaffold_220-1575043694:189452..190053Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:188535..188581TCONS_00052852-exon-scaffold_220-1575043694:188535..188581Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:187313..187389TCONS_00052852-exon-scaffold_220-1575043694:187313..187389Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:186822..186917TCONS_00052852-exon-scaffold_220-1575043694:186822..186917Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:185328..185617TCONS_00052852-exon-scaffold_220-1575043694:185328..185617Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:184614..184739TCONS_00052852-exon-scaffold_220-1575043694:184614..184739Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:181751..181917TCONS_00052852-exon-scaffold_220-1575043694:181751..181917Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:181123..181260TCONS_00052852-exon-scaffold_220-1575043694:181123..181260Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:180301..180521TCONS_00052852-exon-scaffold_220-1575043694:180301..180521Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:179754..179827TCONS_00052852-exon-scaffold_220-1575043694:179754..179827Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:179264..179387TCONS_00052852-exon-scaffold_220-1575043694:179264..179387Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1575043694:178327..178762TCONS_00052852-exon-scaffold_220-1575043694:178327..178762Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:189452..190053TCONS_00052852-exon-scaffold_220-1510915933:189452..190053Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:188535..188581TCONS_00052852-exon-scaffold_220-1510915933:188535..188581Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:187313..187389TCONS_00052852-exon-scaffold_220-1510915933:187313..187389Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:186822..186917TCONS_00052852-exon-scaffold_220-1510915933:186822..186917Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:185328..185617TCONS_00052852-exon-scaffold_220-1510915933:185328..185617Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:184614..184739TCONS_00052852-exon-scaffold_220-1510915933:184614..184739Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:181751..181917TCONS_00052852-exon-scaffold_220-1510915933:181751..181917Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:181123..181260TCONS_00052852-exon-scaffold_220-1510915933:181123..181260Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:180301..180521TCONS_00052852-exon-scaffold_220-1510915933:180301..180521Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:179754..179827TCONS_00052852-exon-scaffold_220-1510915933:179754..179827Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:179264..179387TCONS_00052852-exon-scaffold_220-1510915933:179264..179387Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1510915933:178327..178762TCONS_00052852-exon-scaffold_220-1510915933:178327..178762Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:189452..190053TCONS_00052852-exon-scaffold_220-1491911889:189452..190053Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:188535..188581TCONS_00052852-exon-scaffold_220-1491911889:188535..188581Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:187313..187389TCONS_00052852-exon-scaffold_220-1491911889:187313..187389Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:186822..186917TCONS_00052852-exon-scaffold_220-1491911889:186822..186917Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:185328..185617TCONS_00052852-exon-scaffold_220-1491911889:185328..185617Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:184614..184739TCONS_00052852-exon-scaffold_220-1491911889:184614..184739Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:181751..181917TCONS_00052852-exon-scaffold_220-1491911889:181751..181917Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:181123..181260TCONS_00052852-exon-scaffold_220-1491911889:181123..181260Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:180301..180521TCONS_00052852-exon-scaffold_220-1491911889:180301..180521Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:179754..179827TCONS_00052852-exon-scaffold_220-1491911889:179754..179827Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:179264..179387TCONS_00052852-exon-scaffold_220-1491911889:179264..179387Clytia hemisphaericaexon
TCONS_00052852-exon-scaffold_220-1491911889:178327..178762TCONS_00052852-exon-scaffold_220-1491911889:178327..178762Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:178327..190053 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	7.40668e-07	0	3.64741	1.08086	1.59989	6.68937	1.24771	1.62408	0	0.845948	1.59476	0	1.07149e-07	6.92448e-07	9.76018	12.3405	0.354485	1.08226	0	0.12003	0	0	0.000174151	6.98414e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052852 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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