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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057045 ID=TCONS_00057045|Name=TCONS_00057045|organism=Clytia hemisphaerica|type=transcript|length=888bp
ATGATTCAGATTCTGCTTATTCTTAGCGGATCAGTTGAAGTGAATCCAGG
GCCAAGAAGAACCAGAGTAAAATTCCCATGTGGTGAATGCAAAAAGGCCA
TAACAACCAACAATGCGATTGCCTGTGACGAATGCAACAAATGGTACCAT
GTCAATTGTCTCTCCATGAATGCTAGTGTCTTCAATGCGTATACAAAAGA
CGAACTACTCGAATGGATCTGTCCTAACTGTGCCTTGGCCAACATAAGCA
ACTCATTATTTGATAGTTTCTCTGCTTCTAGCACTGCAGAAAgtgataat
gatgatgatgaaaatcaaaataaccctccgaaaacaaaaagacaatcgCT
CAGGATCATGATCGTCAACTTCCAAAGTATCTGGGGAAAGAAAGAAAACC
TTCAAAAACTCCTTTACGATCACAATATTGATGTGGTTCTTGGTTCAGAA
ACCCATATTGATCCTTCAATTGGAGATAGCGATATTCTTCCCAATGGCTA
CCGTGCTTTTCGAAATGACCGTCTACATAAATCTGGTGGTGGTGTTATTA
TCATTGTGAAAAATTCACTCTTTGCTGTCGAAGCTGCAAAATCGAAAGAC
AGTGAAAGTATATCTGTCAAGATTGAAACTTTTCAGAAACCCATCATTTT
AACATCAGTTTACCGCCCAACCAACAAAAACCAGAAATATCTAGACTCTT
TAATTAAAGACATAAAAAGCACTCTGTCCAAATTCAAATCAAATCCTCAT
TGGATAGGGGGAGATCTGAACTTACCAGACATTGATTGGTCTACTAATAG
TATCACAAGCTCTCAATACCCTAAATCACTAAATGAATCGTTCTTGGATA
TGCTAGGAGATAACAACTTAGAACAACTTGTCGACTTT Run BLAST on NCBI protein sequence of TCONS_00057045-protein >TCONS_00057045-protein ID=TCONS_00057045-protein|Name=TCONS_00057045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
MIQILLILSGSVEVNPGPRRTRVKFPCGECKKAITTNNAIACDECNKWYH
VNCLSMNASVFNAYTKDELLEWICPNCALANISNSLFDSFSASSTAESDN
DDDENQNNPPKTKRQSLRIMIVNFQSIWGKKENLQKLLYDHNIDVVLGSE
THIDPSIGDSDILPNGYRAFRNDRLHKSGGGVIIIVKNSLFAVEAAKSKD
SESISVKIETFQKPIILTSVYRPTNKNQKYLDSLIKDIKSTLSKFKSNPH
WIGGDLNLPDIDWSTNSITSSQYPKSLNESFLDMLGDNNLEQLVDF Run BLAST on NCBI transcript from alignment at scaffold_284:1476866..1477753 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057045 ID=TCONS_00057045|Name=TCONS_00057045|organism=Clytia hemisphaerica|type=transcript|length=888bp|location=Sequence derived from alignment at scaffold_284:1476866..1477753 (Clytia hemisphaerica)
AAAGTCGACAAGTTGTTCTAAGTTGTTATCTCCTAGCATATCCAAGAACG
ATTCATTTAGTGATTTAGGGTATTGAGAGCTTGTGATACTATTAGTAGAC
CAATCAATGTCTGGTAAGTTCAGATCTCCCCCTATCCAATGAGGATTTGA
TTTGAATTTGGACAGAGTGCTTTTTATGTCTTTAATTAAAGAGTCTAGAT
ATTTCTGGTTTTTGTTGGTTGGGCGGTAAACTGATGTTAAAATGATGGGT
TTCTGAAAAGTTTCAATCTTGACAGATATACTTTCACTGTCTTTCGATTT
TGCAGCTTCGACAGCAAAGAGTGAATTTTTCACAATGATAATAACACCAC
CACCAGATTTATGTAGACGGTCATTTCGAAAAGCACGGTAGCCATTGGGA
AGAATATCGCTATCTCCAATTGAAGGATCAATATGGGTTTCTGAACCAAG
AACCACATCAATATTGTGATCGTAAAGGAGTTTTTGAAGGTTTTCTTTCT
TTCCCCAGATACTTTGGAAGTTGACGATCATGATCCTGAGcgattgtctt
tttgttttcggagggttattttgattttcatcatcatcattatcacTTTC
TGCAGTGCTAGAAGCAGAGAAACTATCAAATAATGAGTTGCTTATGTTGG
CCAAGGCACAGTTAGGACAGATCCATTCGAGTAGTTCGTCTTTTGTATAC
GCATTGAAGACACTAGCATTCATGGAGAGACAATTGACATGGTACCATTT
GTTGCATTCGTCACAGGCAATCGCATTGTTGGTTGTTATGGCCTTTTTGC
ATTCACCACATGGGAATTTTACTCTGGTTCTTCTTGGCCCTGGATTCACT
TCAACTGATCCGCTAAGAATAAGCAGAATCTGAATCAT Coding sequence (CDS) from alignment at scaffold_284:1476866..1477753 >TCONS_00057045 ID=TCONS_00057045|Name=TCONS_00057045|organism=Clytia hemisphaerica|type=CDS|length=888bp|location=Sequence derived from alignment at scaffold_284:1476866..1477753 (Clytia hemisphaerica)
AAAGTCGACAAGTTGTTCTAAGTTGTTATCTCCTAGCATATCCAAGAACG
ATTCATTTAGTGATTTAGGGTATTGAGAGCTTGTGATACTATTAGTAGAC
CAATCAATGTCTGGTAAGTTCAGATCTCCCCCTATCCAATGAGGATTTGA
TTTGAATTTGGACAGAGTGCTTTTTATGTCTTTAATTAAAGAGTCTAGAT
ATTTCTGGTTTTTGTTGGTTGGGCGGTAAACTGATGTTAAAATGATGGGT
TTCTGAAAAGTTTCAATCTTGACAGATATACTTTCACTGTCTTTCGATTT
TGCAGCTTCGACAGCAAAGAGTGAATTTTTCACAATGATAATAACACCAC
CACCAGATTTATGTAGACGGTCATTTCGAAAAGCACGGTAGCCATTGGGA
AGAATATCGCTATCTCCAATTGAAGGATCAATATGGGTTTCTGAACCAAG
AACCACATCAATATTGTGATCGTAAAGGAGTTTTTGAAGGTTTTCTTTCT
TTCCCCAGATACTTTGGAAGTTGACGATCATGATCCTGAGcgattgtctt
tttgttttcggagggttattttgattttcatcatcatcattatcacTTTC
TGCAGTGCTAGAAGCAGAGAAACTATCAAATAATGAGTTGCTTATGTTGG
CCAAGGCACAGTTAGGACAGATCCATTCGAGTAGTTCGTCTTTTGTATAC
GCATTGAAGACACTAGCATTCATGGAGAGACAATTGACATGGTACCATTT
GTTGCATTCGTCACAGGCAATCGCATTGTTGGTTGTTATGGCCTTTTTGC
ATTCACCACATGGGAATTTTACTCTGGTTCTTCTTGGCCCTGGATTCACT
TCAACTGATCCGCTAAGAATAAGCAGAATCTGAATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057045-exon-scaffold_284-1491911889:1476866..1477753 | TCONS_00057045-exon-scaffold_284-1491911889:1476866..1477753 | Clytia hemisphaerica | exon |
| TCONS_00057045-exon-scaffold_284-1510915933:1476866..1477753 | TCONS_00057045-exon-scaffold_284-1510915933:1476866..1477753 | Clytia hemisphaerica | exon |
| TCONS_00057045-exon-scaffold_284-1575043694:1476866..1477753 | TCONS_00057045-exon-scaffold_284-1575043694:1476866..1477753 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:1476866..1477753 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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