TCONS_00053434 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053434
Unique NameTCONS_00053434
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5003

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053434 ID=TCONS_00053434|Name=TCONS_00053434|organism=Clytia hemisphaerica|type=transcript|length=5003bp
CGATATAAGACCTGACGACCATGCTTTCGAAAAGAGTTATCACGATCGGC
AGAAAGATCACGtgcacaaacaacaaaattattaGGATGGCGATTCCGAC
AGCTATAACTTGTGATATTTCCTCTACAACAATGGATGCCATAGATTTGA
CAACAGTCGACAAAGCTATTAAAGAAATCTCCTGGTCCCAAGGAATAAAG
GATCTGGTAGACTCCCTGCATAATGTCGATGaatcaaaGGATTATGTTCC
ATTTCTCTTGAACGATGCGCAAATCGGTTTGGTATCTCCAGAGGTGATCA
AAGAAATGTCTAAACAAAAGGCTATTTTCATCATTGCGAAGGATTTGCTC
AccggaaaaacaaaatttaccacAATGGCGCTGTCACTCAAGGACAGGGA
AGAACGTTCTACGAAGTTAGCCTGTTTCTTACGGGACCTAAAGGACAGAG
ATGTGTTCCCAACCTTACGGGGTTGGAGAAATGAGACATACGAGGtcaaa
gaaagtttcaattccGAAGTTCTACTCGATGTAGAAAGATCAGCTTGCTG
TCTCTTCGGCTTTCACACGTACGGTGTCCACGTAAACGGGTACGTAAAGA
ACGATCAGGGCGACGTTTACATGTGGGTCTNGTCCACGTAAACGGCTACG
TAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTCAAGGCGAGCGAAG
ACCAAGCCAACATACCCAGGAAAGCTCGACAATACTGTCGCAGGTGGAAT
CGCTTCAGGGGAATCAGTGAAGCAAACATTGGAACGAGAATGCCTTGAAG
AAGCGGGCATTACTGGCAAATTTTCGTCTCAAGCAAGACCAGCTGGGACC
ATCAGttacTTTCTTTCAAATGAGCTTGGCCTCCATCCGGAGACGGAATT
TGTTTACGATTTGGAACTTCCCCGCTCGTTCGAGCCAAAATGTAACGATG
ACGAAGTTTCCGATTTCTATCTTTTACCCATCAAGGAGGTAAAAGAACTT
ATATCAACAAAAGAGTTCAAGCCAAACTCCGCGTTAGTGATACTGGATTT
TTTGATCCGGCATGGTTCAATTAAACCAGATGAAGGTATTCTATTTGTTG
TTTGTTACTTTACCCTCTTGAGTGAATTGTAGTGAATAAAACGATAACAT
TCGAAGAAAAGGTTCTGGAAATGTAATGGAATTCTAGCTTGATTTGAGTA
GAAGATTCATTCAggaagatttgaaaatttcaaactaccAAATAGCCGGA
TGGTTGaaagttttacttttgaaaacccaataCTAAAGGTCAAAATCAAG
CTAATTTGTAAGCTAATAACTGAAAGCATTCTTGTAAACATGGGTCCTGC
GATTGAGGGCTGAAGACAaggaaaaacaaggaaacatttttctttcattt
tccttttagaACCACATTACGTTGAGTTCGTCAAAGGTTGTCATCGGACG
CTGGCCTATTGATGAATGCGAATGGAGTATTGCATTGTTGCTGATTCTGT
TCTTGTATATCTGCTGACCAGTCATCGAACCGTATTTTCCATTGAAAATT
CTACCGCCGTTGAATCTATGTCCGTTTCTCGGGATTAGATCACAGGAATT
TTCCGATTTTGCTATAAAGATGCAAAATGTGACTGAGCGCTTTGGGAATA
TTTGAGCCAAAAACAAGATTCAATTAGTTGATATTATGTTTTGTAAGCCT
ATCCGTGCTCTTTTATTTTACGTGTCCCAGTGCTTTTACAACTTAACGAG
TGTCACATTTGTTACGGGTAGTCACTAAAGGGTTTTAGGGTTTCCTGTTT
TAATCATTTCAACTTTATGCTCACTGTTCAATGTTTTGTATATCCATACA
AATTATCACTAGTTGGTATAACGTTTCTTTACAGAGAGTGATACCAATGA
CCTGGCATGTGTTCACCtacataaaactgaaaatatttcacGATATTGTA
CTTGTTTTGTTTCTCTAGATTTGTTTTCCTTACTTTGAATAAGGATTATC
TTAAATCTCTATTGActatttaaaataattttgtatttaCAAAACCCact
atttattaaaaaaatttgtacagaaatttttataggaaaattgtttttta
aaaaagataactTTATCTTATCACGAGGCATTTTTTCCAATCCATATTTT
CGAGAAAAAGTGAACAAACTTTTCAGTGATTAAACTATTAACTAGCATCT
ATCATGATCGCAGCTAAACAAAAACCTCCATCTTTCGAccataaattcaa
aaaatgagtTCCCGCAGTCACATCACTAGCAACAGTATCAACCTGTGTCC
GACGTCCAGGGTCACCGGGCTTTCCTTCTTGGATGAAAACCGGTTGATCG
TTTTTATCATCTATCCAGATCATTGAAGAGCCGCCCCATTTTGAATGCGT
TGTTATGGCAACTTCAAATCGTTTATCTTTATTTTCAGGTGATTTTGGAA
TGGTAAAGACGAGCTTCAGAGAGGATGTCGGTTTATCCGTTTTCTCAGAT
TTATAACAAATAACTTTATCAAATCTAATTGGAAAGTTAGTAGCATATTG
TATTTTAAAGCCATCATTTGAAGCCACGCTCACCTCCAAAGTGTTATGGA
CTGGATCTTTTTCATCGGGTCGTATCAAGGTCCAACAATATGGTTCTGGA
TGTTTTGGGCCAATGAATAAGGGGTCTGGTAACAAATACTGGTCCTGAAA
ATTGACAATATCACCATCGTGTTTTATGGCGTATTGTAAAACAGCTCGCA
TCACGTGTCGCAGATGAAGTAATATCAATAATGCTGATTGCGCATGCCCC
TTAAGAGATGGATGGTATTGGTCAACACTGAATAAATCAGCCAATAGAAA
TCCTGGTCTGGATTTAACTAAGCCGTTACAAACCATGGCTCTCCAACTCA
ATGTAGGTACTTTATAATAACTCGCTATAGTATGTTCTTGTTGGTCTTCA
AAGTTCGGACAATCTGATAAACCAGAATTTTTATAATCGATCCCTTTAAA
GAAATTCAGATAAAGTAATGCTGGTTTCGTTGGTAAATCAAGAATCATTC
TAGTGAACCTTTCTAACGGCCTTGCACCTTTCGTGGGAAACGTTTTATAT
CTATTATAATCATTAGCTGAAAGCTCCCATATGACTAAATCAACATTCTT
CTTCAGGTGGTTTTTGAcacaatatgaaaaataatctGTCCCTATAGAAC
CAATGGCTGCATTGTTTACTTTCATTTTGGAACCAGTGACAGGGAAAATC
CATTGGTTCCACCAATCAACTACGCCCTTATAATAAAGTCCTTCTATGCT
TCCACGATCTTTATATAACCCACCACCAGCACTTATGGAGCCACCAACTA
CACTCAATGTTATATCATGACCTGTAATAGCTTTTCGCATCACACCCTTT
AATCTCTCTATGTATCCCGGATAAACAAGTCCTGAACGAATCAGTATGGC
ATTCAAGTCTAGAGAAGATAGTGTTTTGTATGGATATCGCCAAGATTCTA
AAGGGTCCTTGTTTAGGTATTGAACGATAGCCTTGGCTTTTTCAATATTA
ATGACTTTAGTTTTGTTTGAGGGTTTAGAATTTGATGAAGCAAGTAAGTT
CATCAAGTTCCCTGAGTTTGAAATGTTTGGCTGTGATTCTAGAGCGCTTG
ATATAGTAACTGCAAAAGATTGGTTTTGCTGTTTGGCTGTTGGATCAAAG
CTTGGCTTCTGCTGTTGTTTTACACCATTTAGAATATTTGTATTTGATGA
TTGTTGTTTTGGTTTTGTAGAAGCGGTTTCATTGTTTGTGGATATCGCGT
TTTCTTCCATGATACTGGGGATGGATGAATTTGCGTTATCCACCGAATCT
GGATCTGACCATGTGTTGTTTGTGAGTCGAAAATTGTTGGGTAGTTTTGG
TCTGGAAATTACCAAGTCATCGCTATTATCGTTTTCTGTTTCACCTTTTT
GTTGGCCGTCAGTGGATGATGATTTTTTGTCTCCAGTGCGGTGGAACTCT
GTCTTTTTCTTGTAATGTTCTTCTATGGTGTAATGTTTTGGATGAGGGTT
GGTGGGTGGCATATGGTGAAGAGAAGATATAACTATTGTTTTGTTTGTGT
TGTTAGATGTCAATGATTTATTGTTCGTTGCAGTTGTAAATATCACGTGT
CCAGgttgtttgttttgaataacctTATTCGTTGtcaatgttttgttttt
cgttttgtttttctgtttttgaatgtttttagcGACCGGTTTAGCGATTT
TTTTCTGCTGCTTGATTGCTTGTTTCTTTTCGAatggtttttttggactt
tgtttcTCAGTTCTAATCTCAGCAGAATTTGCAGAAGTTCCTTTGGTTGT
CTCACTCTTCTCTTGACTTGATGAAGAAACCGCTCTAATCAAATTCTTAT
CTTCAGTATTCAAATTCTTCATCTTATCTCGAACTTGTTGTAACTTTGCG
ATATCTAAATCCAGTTCAGTTTGAGGTGTCGAGTCTGTTTCTTCTTGATG
TGGGTCATCAACACTTCTGGTCATCTGATCTTTAGGTGTGATCACGATTA
CCCGCACGTGTTTATCTTTGATCGGTTGTTTGATCTCATCCACGAATTTC
TCTTGAATCTGTTCATAACTTCTCTCCATATCTTGATAAACCTCATCCTT
TTGGACGGCATTTTCTTCCAACGATTCTCGATCAATAATAATCGTAAACC
CTTCATCGAAATCTTCGCTGCTTCGTTTTTGAATAATTGAAGACCGTTTT
TCCACAATCGGATTTATCGGATTCTCTTGTTCGGTATCAATGACGATCAA
TGCGCTGTCACTTTTCTCGTCGTAATTTTCGAGGGTTTGCTCCAACTCAT
TATAACTCTCTTGTTCTTGGAGCAATGTTGGTGAGCTTGAAAGGCTTTCT
TGTTGGCACGTGATTCGACATGTTGAAAGGAGGAGAAACAAAGATAAGGA
ATGGACAAAGAGTAACATGCTGCTCGCCTAAAAAATAAAGCAGGAAACAA
TGG
Run BLAST on NCBI

transcript from alignment at scaffold_231:219018..230151+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053434 ID=TCONS_00053434|Name=TCONS_00053434|organism=Clytia hemisphaerica|type=transcript|length=11134bp|location=Sequence derived from alignment at scaffold_231:219018..230151+ (Clytia hemisphaerica)
CGATATAAGACCTGACGACCATGCTTTCGAAAAGAGTTATCACGATCGGC
AGAAAGATCACGtgcacaaacaacaaaattattaGGATGGCGATTCCGAC
AGCTATAACTTGTGATATTTCCTCTACAACAATGGATGCCATAGATTTGA
CAACAGTCGACAAAGCTATTAAAGAAATCTCCTGGTCCCAAGGAATAAAG
GATCTGGTAGACTCCCTGCATAATGTCGATGGTATAGTAAAGTTGTTTTG
GTTTTCCTGTTACTATGTTCCCATCCTCATTCTTCTTTCTATTTCCACTT
CCATTTATCTTCCTATTCCCATTATTGTGTTCTTTTCCTCCACTTATGCT
TTCCAATTTTGCTCTCCTCCCCATTACGCTTCCATTCTGCCTCACAAAAA
TGCAGGAGAGCTCCAATATTCgggaaaattttccccgataatccaatttt
tccaaatcggAAAATCAGCAGATCGGGGGAATTTTCCTGCAAAATCTGAT
TTTATCAGgatttttttcgggaaattggggaaatcagagaaaatttacgt
cccgattttccaaaatcaggaaatcttGTCATTCcgttttatcttttttc
aggaaatcggaaattttttggaaatgcgggagatgtgggagaaaatcctg
aaaatgcggGAGATGATCCTgaaaatgcgggagatttgATTGCGGGAGTC
TCTCGCCCAATGAGAGAGAGTTGACACCTATGAGACGTGTCCCTCATCCC
TGTTCCTGTTCAAACACGTGTTCCTGTTCCCATAGATGTTCCTGTTCCCA
TATGTTATATACATGTTCCTATTCCAATACATCTTCAAGTTCCCATTTGT
ATTTCCGTTCCCATTTGTGTTCCTGTTTGCATTTGTGTTCCTGTCCCCGT
ACGTATTCCACATATTTGGGAAAGGAAGCACAAATGGGAACAGGAACACA
AATAGGGAGGAGAGTGAGATGGGAAGCATAATTGGAGGATAAGAACATAA
ATCGCAACCTTCATTTCAAAAAGCCCAAGTCCACTTACCCctcaatttca
aaaagatctAAGTCCATTTATatgaaaataagtttttttgtattttctgt
aTCTATGAGTCATTAGCTTTCTTTTGATACGTATAATATAAAGATTTCAT
GCTTAAAAAGgccttcaaattttttgatgaacaaTTGTGGACTAAAGGtc
tgtagacttttcaaaaattcaacaaTACAGAGTGCCAAGAAAAGCCCTTT
GACACTTGGGAAATTCCCCAAatgaaccacaagtgattatttggCAGAAG
ACACCTAAAAGCTTGCTAGCAGTCCTTGTGAATTTTGGACTtgcaaatga
ctgaaaatgggtGAACTTCAGCCACACAGGTGGTGGGTGCACCAGAGAGC
TCTGAAAAGTTGTTTATAATACACCTTTCTCTTTCTTCTCTGTTTcatat
aaaaagtcaccaaaatttcgagtaaacaaaccattCCATTGGCTTAAAgc
aaaaacacaaacaaaaaaatgtgcAGAGTGAGAAAAGTGTGCTTTCTGTG
CTCTTACCCTTATTCTTGCTTTTTATATGAAGCAGCTAACCTTAAAAAGG
TGCATTGATTAAACAATCTCAAATATGTTCTATAATAGATGTCTtctcga
aaaagttgaagagcAAAACTCACTGAACCTTCAATCTTCAATCTCAGACA
AAAAATAGCCTGATGactttgcaaaaattaatttccTTCAATGTCGAGTG
GATTTGGATTCTGGCATTGTCATCCAAACTCTCCAAATCCAATAAAACAA
CACCGGCCCTGGTAAAGATGGGTTTTCAGATCATGGACCTAAGtccatca
aaaaagaaaacttatttTAAAAAGGCCTAGTTCATTTAGGTCTCAGCCCA
TATTAAGATAAAGAGTAGATGGCCTAAGTCTTTCAAAGAATCTAGTTCAC
ATTAAAAGGACCTAAATGGATCAAAACAGTATTGTATGGCAggttttcag
ttttcaatgtattttggtcaatttctatGGCCTTGGTTATATACTGTATA
TTCTCAAAGTTTGTGTTTTTTTAAGATCTATTCAATTATTAGCAAttttg
tttgaagaaaaaaggttTTATGTGAAACAAAACATTCATGATTCTCTATg
atgttttcataacttatttagaaattttgtttgaagcTTAAAAAGTTGTT
GGATTTTGTGTGATGTTTCCTTtgcttttaacaaaaaaaaaacaaacatg
ttCTCTGTTTCAAATGATTGATTTCGGTTCAGATCTTTGGAATTTTGTGT
TTGAAATGTATATGTTTCCCTTTTTAAGGGGGTCTGTGCCttatttttcc
aaggggttCTCGAACATTACCATAGGGGTTTATTTAATTAAGGTTTCAAG
GCCAGGGGCTATTCCAAACTAGAATACTTTAAATCAGGAATCCAACAGTG
ccagacaatttcaaaaagtataaaaagaagcataacccaaaaataaccat
ttccttggatttttaaataaaaaacaacaagaaaatagagTCGATGTTGT
AGGAATATTTCGACGATCTTTATCatctatttttgtttttgtctatCAGA
CATCGCTGAATACTGTCTGTATTAGGTTATGCCATATCTTCCTTTCTTTG
GAatgtaaaactcctactcttctgGATATGCGCACTGCTCCTGTTTTGAG
AAATATTCTCTGTTTACATCCCATCTGACGAGGTTTAACAAAACCTAAGC
CAATCGgttgtgttttaaacattctttatTTCAAATCTCTATTGAATCTC
TTTTGTTAATCCTGTTAATAGGCGAATTCTCGTCTTGAGTCACTTTGGTC
GCCTaaagcagtgcctatagaccaataTTAAATTTTGGAGTATATCATGG
CCTactaaaaatttttatttatttatttttagtagGCCATGAGTTTATCT
GCATACACTTTGTTCGACTTGCAGAATCATGCAAAAATAATgattaaaca
aaagaaacagtCCAGAAGTTCACCAGCTGACCTGTTCTNAGAAATATTCT
CCGTTTACGTCGCATGCGCACTGATGAGGTTTAACAAAACCTAAGCCAAT
CGgttgtgttttaaacattctttatTTCAAATCTCTTTTGTTAATCTTGT
TAATCCTGTTAATAGGCGAATTCCCGTCGTGAGTCACTTTGGTCGCCTaa
agcagtgcctatagaccaataTTAAATTTTGGATATAATATATGCATACA
CTTTGTTCGACTTGCAGAATCATGCAAAAATAATgattaaacaaaagaaa
cagtCCAGAAGTTCACCAGTTGAACTGTTCCACTTTCTGCatactttctt
tttttgtcaaatatcaATGTCTTCAGGTTCTTTTGCTGTTGTTTCTTGTG
AGAGGGTGAAAGACtgaaaacaaaatgaaagacaTGGAAGTTGAAGAAAC
TGTCAATGAAGAAGAACTTAATAATGAAACTTCGTGGTCAGAGAAAATGC
TAAAACTGACCAAATCTATTCATTCTTTCAACAGCCAAGGTATATAATTG
TAATTCCTCACGAAAAATCTTTTCCTTCTTGTTAAAAAGATGCTTTTCTA
TTTCAAACGTCAGGTTTTCATTTAGATCTTTACCTTATCTTTTGCAATAT
GACAGCTATCAGTCAGTTTTATTGTGAAAATTGATCAAAACTAGTCAAAG
CTCTTCTCATCGCAGTAAGCAGGCGAACTTCAATATGGtactttgttttt
caaaaaaaaatgtacaaGTTTAAATTAACATTGtgagaaaaatagaaata
ttatatatctaaacttttcaccatcagaaagaagaaaggccaacttaaat
tttgagctgtcATATCTTAAATTTGCTTCACGTGTTAGTTTAAGGTTTTA
ATTGCTGTAATTaggatatttcgattttaacGATTCTTTTTTGCGGTTTT
TTGTAAGCTtgattttcattctttttcgaAAGGGAATATTTTCGAACTTT
CTTTATAACTTTTAAACACTTGAAGCAAATTAAATAAAGTATGATAGCTC
CAAATTCAATTTAGTCTTTCCTCCTTCGAATGGCGAAATATTTGgattta
taacatttttagttttctcagGTTTTCTCACAAACTAACTAGaaacttgt
acacttttttctGAAACACCCGTTGTTTTGAGATTATAGGCTTTTGCTAT
AAAAGGTACTTTTCCGTCTGAGACCACTGTACAGTTATTTCTGTCATCTT
GGATACTAATAACAAATTGGTCTTTCTAATTTCAGCAAACTATGATGATG
GTATCTCTCTAAATTGTACTCCTTATTGAAACCCCTCCCTTTCCTGACCT
TTTCCTGACCCAAAATAACTGTTTCAATTTTGATGATTAATTCCTAGCAG
CCCCTTTTATCCCTTATTTATGGAATGCCTTATTTATGGAATGCCTTATT
TATGgaatgagaaagaaagaaatccAAGGTGTATGTAActtttcattttg
tatttgctgaaaattgtttcattttaacACTACCAAGGAAAAGTCGAATT
TTTATACTCTCCAGATCTTTTAGACTTTTTAAAGGCATTGTCCATACTGC
TCCAAATTGTACGTaagttattattatttttttagaatcaaaGGATTATG
TTCCATTTCTCTTGAACGATGCGCAAATCGGTTTGGTATCTCCAGAGGTG
ATCAAAGAAATGTCTAAACAAAAGGCTATTTTCATCATTGCGAAGGATTT
GCTCAccggaaaaacaaaatttaccacAATGGCGCTGTCACTCAAGGACA
GGGAAGAACGTTCTACGAAGTTAGCCTGTTTCTTACGGGACCTAAAGGAC
AGAGATGTGTTCCCAACCTTACGGGGTTGGAGAAATGAGGTAATCATATT
TTCCACTCTAATCATGAATTGCACAACCTTTAGCCAAACTAATTTTGTAT
CTTCTATCTTTACTTTATTAAATAAAGACCTTATACAGGACGCCTTTTTG
ACACGAAAAACAAACCCATATTCTAAGTTGATAAGTATTTGATAGGGAAA
AAGATTAGGTTCGAATAGCTAGAGGATCCCTTACCTTATCGGttaattat
ttcaaattgaagCAAGATTGATTAGGATTTTCTTCTCTCATAAGATTGCC
CGCGAAATAGCCGAAAGCCCACCATATAGCAGAGATAAGTGACGTCTTTC
CGATACAAATCATTTGAGTAGGATCCGTTCTAATAAATGGGTTCGTACGT
AAAATTAGCCACAAATGGTATTATAAGAGGATGATGGTCTGTTCACTGTA
GTGAGGGATATGAATCTATAAAACAATAAACTCATCTCTCAATCTTAGAC
ATACGAGGtcaaagaaagtttcaattccGAAGTTCTACTCGATGTAGAAA
GATCAGCTTGCTGTGAGTGAATGACTTGTTTTATTATTAACCATTGAAAG
AATGTAAAATCATCTTTAACCAAGGAACACAACTTATCTTTGCCGATGGT
CCGTTCCTTTTTACACAGTACAAGAACTCTTTtcggaaatcgaaaatttg
atCTGCACATACTCGTAGTCGGCAGCAAATCTGATAAGCGTACAAAATGT
GGTTTTGATTTTGTTCAGCctcgaaaaaactaaatttcttAGATGTCGAT
AGAAATTTGTGAATTTGATAGAATGGTGATAACACCGAAATATatcgttt
gattgtttttaacattttaagaatctttgaaaaatggcctcaaattaaaa
cataatttaatttgattttatttcGGTCAAACCTGTGTATAACCGCCACA
TTCTTTTTTCGTGCTAGGTCTCTTCGGCTTTCACACGTACGGTGTCCACG
TAAACGGGTACGTAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTNG
TCCACGTAAACGGCTACGTAAAGAACGATCAGGGCGACGTTTACATGTGG
GTCTCAAGGCGAGCGAAGACCAAGCCAACATACCCAGGAAAGCTCGACAA
TACTGTAAGCTTTAACATTCGAGTCTTTGGAAGTGTTTCAATAGTGCTAA
AATGTAAGAAGGTGACATAACCATTGTTGGTTACAAAAGAATGTATCTTT
AGGAAGATTTTGATGTTCTAACTTCTTTCACTTTCAACTCAGGTCGCAGG
TGGAATCGCTTCAGGGGAATCAGTGAAGCAAACATTGGAACGAGAATGCC
TTGAAGAAGCGGGCATTACTGGCAAATTTTCGTCTCAAGCAAGACCAGCT
GGGACCATCAGGTATTTCCTTAAATCAATCATAATTATGggttttcaata
ttttacctCAAAACCTTTTGTAGACACAAAgatgtatttttgtttttcat
cggttactctttttttatttttagttacTTTCTTTCAAATGAGCTTGGCC
TCCATCCGGAGACGGAATTTGTTTACGATTTGGAACTTCCCCGCTCGTTC
GAGCCAAAATGTAACGATGACGAAGTTTCCGATTTCTATCTTTTACCCAT
CAAGGAGGTAAAATCATGTTTTGTTGCTGTTCTGGTACAGGGTGGGCAAA
AATATAAATATGGTCAGACAAAAATTGTGTTACATATGGAAAGCAATTAG
TGCCATTTTTTGCCCACCCTTTAATAACATTACTTCTCAGCTCTTTCCTC
TTACTTGTTGAAGAAGAACCGAGTGTTACTGTCTTTGAAAATATGGATAC
CGTAttacttcttttaaacgcccccctcgaataaacgcccctcctaacaa
ggaaaattatttaataaacgcccccctcaAATGAACGCCCCCTCTAGGGG
AAGGGTGCTTATTGgaaacttgtgactttaatacttcaataccagtgttg
attgggttggaaaaggaagattttaatcatttcttgtaaccagagcagtt
ttcgatgcaattttagtcgttgaaccaaagaaattttgcactaaaatcct
gatagagaactaaaacaaagggtatatttgctctaaatattcgattttag
actaaaataatttaataaacgcccccttcttttaaacgccccgggcgttt
attcggAGTAATACGGTATATGtagaatatttttctaaatagCTTAGAAC
ATAACTATTTCCTTTCAAGGTAAAAGAACTTATATCAACAAAAGAGTTCA
AGCCAAACTCCGCGTTAGTGATACTGGATTTTTTGATCCGGCATGGTTCA
ATTAAACCAGATGAAGGTATTCTATTTGTTGTTTGTTACTTTACCCTCTT
GAGTGAATTGTAGTGAATAAAACGATAACATTCGAAGAAAAGGTTCTGGA
AATGTAATGGAATTCTAGCTTGATTTGAGTAGAAGATTCATTCAggaaga
tttgaaaatttcaaactaccAAATAGCCGGATGGTTGaaagttttacttt
tgaaaacccaataCTAAAGGTCAAAATCAAGCTAATTTGTAAGCTAATAA
CTGAAAGCATTCTTGTAAACATGGGTCCTGCGATTGAGGGCTGAAGACAa
ggaaaaacaaggaaacatttttctttcattttccttttagaACCACATTA
CGTTGAGTTCGTCAAAGGTTGTCATCGGACGCTGGCCTATTGATGAATGC
GAATGGAGTATTGCATTGTTGCTGATTCTGTTCTTGTATATCTGCTGACC
AGTCATCGAACCGTATTTTCCATTGAAAATTCTACCGCCGTTGAATCTAT
GTCCGTTTCTCGGGATTAGATCACAGGAATTTTCCGATTTTGCTATAAAG
ATGCAAAATGTGACTGAGCGCTTTGGGAATATTTGAGCCAAAAACAAGAT
TCAATTAGTTGATATTATGTTTTGTAAGCCTATCCGTGCTCTTTTATTTT
ACGTGTCCCAGTGCTTTTACAACTTAACGAGTGTCACATTTGTTACGGGT
AGTCACTAAAGGGTTTTAGGGTTTCCTGTTTTAATCATTTCAACTTTATG
CTCACTGTTCAATGTTTTGTATATCCATACAAATTATCACTAGTTGGTAT
AACGTTTCTTTACAGAGAGTGATACCAATGACCTGGCATGTGTTCACCta
cataaaactgaaaatatttcacGATATTGTACTTGTTTTGTTTCTCTAGA
TTTGTTTTCCTTACTTTGAATAAGGATTATCTTAAATCTCTATTGActat
ttaaaataattttgtatttaCAAAACCCactatttattaaaaaaatttgt
acagaaatttttataggaaaattgttttttaaaaaagataactTTATCTT
ATCACGAGGCATTTTTTCCAATCCATATTTTCGAGAAAAAGTGAACAAAC
TTTTCAGTGATTAAACTATTAACTAGCATCTATCATGATCGCAGCTAAAC
AAAAACCTCCATCTTTCGAccataaattcaaaaaatgagtTCCCGCAGTC
ACATCACTAGCAACAGTATCAACCTGTGTCCGACGTCCAGGGTCACCGGG
CTTTCCTTCTTGGATGAAAACCGGTTGATCGTTTTTATCATCTATCCAGA
TCATTGAAGAGCCGCCCCATTTTGAATGCGTTGTTATGGCAACTTCAAAT
CGTTTATCTTTATTTTCAGGTGATTTTGGAATGGTAAAGACGAGCTTCAG
AGAGGATGTCGGTTTATCCGTTTTCTCAGATTTATAACAAATAACTTTAT
CAAATCTAATTGGAAAGTTAGTAGCATATTGTATTTTAAAGCCATCATTT
GAAGCCACGCTCACCTCCAAAGTGTTATGGACTGGATCTTTTTCATCGGG
TCGTATCAAGGTCCAACAATATGGTTCTGGATGTTTTGGGCCAATGAATA
AGGGGTCTGGTAACAAATACTGGTCCTGAAAATTGACAATATCACCATCG
TGTTTTATGGCGTATTGTAAAACAGCTCGCATCACGTGTCGCAGATGAAG
TAATATCAATAATGCTGATTGCGCATGCCCCTTAAGAGATGGATGGTATT
GGTCAACACTGAATAAATCAGCCAATAGAAATCCTGGTCTGGATTTAACT
AAGCCGTTACAAACCATGGCTCTCCAACTCAATGTAGGTACTTTATAATA
ACTCGCTATAGTATGTTCTTGTTGGTCTTCAAAGTTCGGACAATCTGATA
AACCAGAATTTTTATAATCGATCCCTTTAAAGAAATTCAGATAAAGTAAT
GCTGGTTTCGTTGGTAAATCAAGAATCATTCTAGTGAACCTTTCTAACGG
CCTTGCACCTTTCGTGGGAAACGTTTTATATCTATTATAATCATTAGCTG
AAAGCTCCCATATGACTAAATCAACATTCTTCTTCAGGTGGTTTTTGAca
caatatgaaaaataatctGTCCCTATAGAACCAATGGCTGCATTGTTTAC
TTTCATTTTGGAACCAGTGACAGGGAAAATCCATTGGTTCCACCAATCAA
CTACGCCCTTATAATAAAGTCCTTCTATGCTTCCACGATCTTTATATAAC
CCACCACCAGCACTTATGGAGCCACCAACTACACTCAATGTTATATCATG
ACCTGTAATAGCTTTTCGCATCACACCCTTTAATCTCTCTATGTATCCCG
GATAAACAAGTCCTGAACGAATCAGTATGGCATTCAAGTCTAGAGAAGAT
AGTGTTTTGTATGGATATCGCCAAGATTCTAAAGGGTCCTTGTTTAGGTA
TTGAACGATAGCCTTGGCTTTTTCAATATTAATGACTTTAGTTTTGTTTG
AGGGTTTAGAATTTGATGAAGCAAGTAAGTTCATCAAGTTCCCTGAGTTT
GAAATGTTTGGCTGTGATTCTAGAGCGCTTGATATAGTAACTGCAAAAGA
TTGGTTTTGCTGTTTGGCTGTTGGATCAAAGCTTGGCTTCTGCTGTTGTT
TTACACCATTTAGAATATTTGTATTTGATGATTGTTGTTTTGGTTTTGTA
GAAGCGGTTTCATTGTTTGTGGATATCGCGTTTTCTTCCATGATACTGGG
GATGGATGAATTTGCGTTATCCACCGAATCTGGATCTGACCATGTGTTGT
TTGTGAGTCGAAAATTGTTGGGTAGTTTTGGTCTGGAAATTACCAAGTCA
TCGCTATTATCGTTTTCTGTTTCACCTTTTTGTTGGCCGTCAGTGGATGA
TGATTTTTTGTCTCCAGTGCGGTGGAACTCTGTCTTTTTCTTGTAATGTT
CTTCTATGGTGTAATGTTTTGGATGAGGGTTGGTGGGTGGCATATGGTGA
AGAGAAGATATAACTATTGTTTTGTTTGTGTTGTTAGATGTCAATGATTT
ATTGTTCGTTGCAGTTGTAAATATCACGTGTCCAGgttgtttgttttgaa
taacctTATTCGTTGtcaatgttttgtttttcgttttgtttttctgtttt
tgaatgtttttagcGACCGGTTTAGCGATTTTTTTCTGCTGCTTGATTGC
TTGTTTCTTTTCGAatggtttttttggactttgtttcTCAGTTCTAATCT
CAGCAGAATTTGCAGAAGTTCCTTTGGTTGTCTCACTCTTCTCTTGACTT
GATGAAGAAACCGCTCTAATCAAATTCTTATCTTCAGTATTCAAATTCTT
CATCTTATCTCGAACTTGTTGTAACTTTGCGATATCTAAATCCAGTTCAG
TTTGAGGTGTCGAGTCTGTTTCTTCTTGATGTGGGTCATCAACACTTCTG
GTCATCTGATCTTTAGGTGTGATCACGATTACCCGCACGTGTTTATCTTT
GATCGGTTGTTTGATCTCATCCACGAATTTCTCTTGAATCTGTTCATAAC
TTCTCTCCATATCTTGATAAACCTCATCCTTTTGGACGGCATTTTCTTCC
AACGATTCTCGATCAATAATAATCGTAAACCCTTCATCGAAATCTTCGCT
GCTTCGTTTTTGAATAATTGAAGACCGTTTTTCCACAATCGGATTTATCG
GATTCTCTTGTTCGGTATCAATGACGATCAATGCGCTGTCACTTTTCTCG
TCGTAATTTTCGAGGGTTTGCTCCAACTCATTATAACTCTCTTGTTCTTG
GAGCAATGTTGGTGAGCTTGAAAGGCTTTCTTGTTGGCACGTGATTCGAC
ATGTTGAAAGGAGGAGAAACAAAGATAAGGAATGGACAAAGAGTAACATG
CTGCTCGCCTAAAAAATAAAGCAGGAAACAATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033734XLOC_033734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053434-exon-scaffold_231-1491911889:219018..219248TCONS_00053434-exon-scaffold_231-1491911889:219018..219248Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1510915933:219018..219248TCONS_00053434-exon-scaffold_231-1510915933:219018..219248Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1575043694:219018..219248TCONS_00053434-exon-scaffold_231-1575043694:219018..219248Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1491911889:223653..223906TCONS_00053434-exon-scaffold_231-1491911889:223653..223906Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1510915933:223653..223906TCONS_00053434-exon-scaffold_231-1510915933:223653..223906Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1575043694:223653..223906TCONS_00053434-exon-scaffold_231-1575043694:223653..223906Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1491911889:224366..224429TCONS_00053434-exon-scaffold_231-1491911889:224366..224429Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1510915933:224366..224429TCONS_00053434-exon-scaffold_231-1510915933:224366..224429Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1575043694:224366..224429TCONS_00053434-exon-scaffold_231-1575043694:224366..224429Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1491911889:224835..225021TCONS_00053434-exon-scaffold_231-1491911889:224835..225021Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1510915933:224835..225021TCONS_00053434-exon-scaffold_231-1510915933:224835..225021Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1575043694:224835..225021TCONS_00053434-exon-scaffold_231-1575043694:224835..225021Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1491911889:225160..225278TCONS_00053434-exon-scaffold_231-1491911889:225160..225278Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1510915933:225160..225278TCONS_00053434-exon-scaffold_231-1510915933:225160..225278Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1575043694:225160..225278TCONS_00053434-exon-scaffold_231-1575043694:225160..225278Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1491911889:225392..225524TCONS_00053434-exon-scaffold_231-1491911889:225392..225524Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1510915933:225392..225524TCONS_00053434-exon-scaffold_231-1510915933:225392..225524Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1575043694:225392..225524TCONS_00053434-exon-scaffold_231-1575043694:225392..225524Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1491911889:226137..230151TCONS_00053434-exon-scaffold_231-1491911889:226137..230151Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1510915933:226137..230151TCONS_00053434-exon-scaffold_231-1510915933:226137..230151Clytia hemisphaericaexon
TCONS_00053434-exon-scaffold_231-1575043694:226137..230151TCONS_00053434-exon-scaffold_231-1575043694:226137..230151Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:219018..230151 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000797302	0	0.010695	0	0.00309092	0.0767999	0.102272	1.00074e-07	0	0	0.0295746	0.0451428	0	0	0	0.00195153	0	0	0	0	0	0.0107018	0.0145151	0.0801319	0.0322547	0.0592209	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053434 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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