TCONS_00053924 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053924
Unique NameTCONS_00053924
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2986

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053924 ID=TCONS_00053924|Name=TCONS_00053924|organism=Clytia hemisphaerica|type=transcript|length=2986bp
tttagaatTGTTGCAAATAGATATTAAGAAAATAGATTAGAATTGGTTGT
TTTGGATTTATTGAAAGGCCATGCTGAATATCTGTATTGCAAAGCAACAC
TGGCATAGAGttttgccatCAATTGCAAGATTGTCCACATCAAAGGCAAT
TGAAGATGGTCTTTACTCTGGCCCTGAAATCAAGACAGCCATACCAGGTC
CTATTTCCTTGGAAAAAAAGAGTGAAATGATTGGTTTGAATGCAAGTGCT
GAtgccatcttcttctttgttgATTATGCCAAATCCAAAGGAAACTATAT
GGTTGATGTTGATGAGAATGTAATTTTAGATGCTCATGGACAAATCTCTT
CATTGCCTTTAGgtTACAACCATCCCGCTCTTCGAAAAGCAGTTGAATCA
GATGATGTCAAGAATTATCTGATCAATCGACCTGTACTTGGCATACTTCC
ACCATCAGATACCAAAGACCTTCTCGAAAAAACATTACTAAAGGTCAAAC
CAAAAGGCATGGATTACGTTCAAACAATGATGTGCGGTTCCTGCAGTAAT
GAAAATGCCTTCAAGAGTGCCTTCATCAAATATATGaaCGATGAAAGAGG
GTACGAGATGCCTTCTGAAGAAGATTTACTCTCGTGCATGTCTGCACAGG
CACCAGGAACTCCAGACTTGGTTATTCTTTCGTTCACTACAGGATTCCAT
GGACGAACCATAGGTTGTTTAGCAGCTTCGAAAACGAAACCAATGTACAG
AGTTGATATTCCGATCCACGACTGGCCAACTGCTGACTTTCCTCATCTCA
AATACCCACTGAATGAACATGAGAAAGAAAACAGAGAAATTGAGGATAGA
GCGCTTGAAACGGTCCGTAAAACAATAATGGAATCCAATGCACGTGGTCG
AAAAGTTGCAGCAGCTATCATCGAACCCATACAAGGAGACGGAGGTGATA
ACCATGCGACGCCCTATTTCTTCAAAGAATTacaaaagattttgaaagag
TTCAATGCAGCTTTCATTGTTGATGAAGTCCAAAGTGGTGGTGGTGGCAG
TGGAAAAATATGGGCACATGAACATTGGGGGTTAGAGGAACCACCAGACA
TGGTAACGTTTGCCAAGAAAATGCAAGTTGGTGGTTTTTATTACAAGAAG
GATTACCTTGTCAAGCAGCCATATCGTATTTTCAACACGTTCATGGGTGA
TCCTGCACGTAACGCAATGTTAAAAGCCATCATAGAGACAATCGAAGAGG
AGAACTTAATGCAAAAAGTGACAAACACtggaaaatatttcttggaacaA
CTGAAAGGGCTTCAGGAGAGCAAACCTGACCATTTTATGGATGCTAGAGG
TGTCGGTTTCCAAGTTGGTATCTCATGCAAAACACCAGAAATCAGTTCAA
AGATTTATCATGAAATTCGACAAATGGGTTTGAACACTGGTGTTAGTGGC
ACCCAGACCATACGATTTCGGCCATCACTGATCTTCAATAATTCACACGC
TGACCTAACTATTGACATATTGGATGCTGCCGCTAAAAGGATCTAGATAG
TATGATCTAACTACGTGGTTGGATCGGGTTTTCAATAATAACGGAactac
tttaaccggattaaatttcgcgagcgaGCGAGCGAGCGAAACAAATCACG
AGCGAAAAAAACctcgaaattttctggatttaatttcgcgagtcacagtt
tttaaaaatttcgcgtggacttaattttgcgaataaggctaaaaacagct
gaaaaatagccattttttgccacaAATGGAGACTTTTGATTGGTTTCTCC
CCCAAAAAtacgattttaaaaattttgtagtgtatttaattttgcgaatc
agAAATCTCAAgcgttttcgcgaaatttaatttctcgaaagttaatccga
ttaaagtatgtCCAGAGCTTCAGAACCAACTAGTCCACCATGATGTCTTA
AATTTTTGATATAAGACAAAGGGATTCGAGTGTTTTGAAGTTAAAACTTT
CGACGTAAGACAGAAACAACATCACAGACGAGTCAACTCTAAATCTAGAC
ACGTTTTCAAATGGTCGTGGCTTGTTCACAATTACGAAAGACACATCtag
acttatttcgtacttttcaGTCTCtagttcgtagtttttctgacttttgg
gACTTTTTGGTCAAATGAAATCTGTGGGCAGATGACTTATCAAATTAGCA
AAGGAATATGATGGAATAAGACATTCCTTCAAAAAATATAGTTGGAAGTT
ATGTTGGAAGTTTGAGTTCagttttattgaatatttttaaaataatttta
acatAATACTTTGTAAATAGATTTATGAATTTGGATTGGCAAGCTAGGGG
GGCAAAAATCCCTGTAAGACACTGTGCATTGATCATAGTTTAAGCCTTAT
TTGGATCGTTTTAGGGTATTGCAACACGCATTTATCGAACTTTTCCCGTA
TATAACAACAAGTTATACTAGTTACTATTGTTGCTAGGGACTGAATTAGA
GGTTTGCTGTACTCCCAAGAGACTTTGGTCAAAAAGGTTCAGCTGCATAG
GtatttttataattaatttttacaatTGTTTTGTAAGTAAGATATATTTT
GATTATTCAATCGTTATTATTATTCAATTattatacaacttttttatcaa
tctCAATACCCACATCCACACACACATTTGTTACGATATACTTGGTATAA
TCTAAAATTGTAAATAGTGCATCCTGATTATTTTGTCACTGATAAATCCT
TCAAGAGAGATACTTGAAGTACAGaaaactttcttaaaaataacattttg
atCGATGGtacatttaaaaagaaatgagTTTCACTTTTTAAAGAGCGCTG
CTAAATTTTATAGAGCGATTTTAATTCATAGAAGATTGTTTGTCCATTAT
TTGTTaatgtagcctggatatccaagctcaaaattttagaaaaaacaaaa
tttacctcaacatacaaagttctaaaattatagagc
Run BLAST on NCBI

transcript from alignment at scaffold_237:103432..117484+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053924 ID=TCONS_00053924|Name=TCONS_00053924|organism=Clytia hemisphaerica|type=transcript|length=14053bp|location=Sequence derived from alignment at scaffold_237:103432..117484+ (Clytia hemisphaerica)
tttagaatTGTTGCAAATAGATATTAAGAAAATAGATTAGAATTGGTTGT
TTTGGATTTATTGAAAGGCCATGCTGAATATCTGTATTGCAAAGCAACAC
TGGCATAGAGGtagatttttcattcaaaatagaCCTCTTGTAAGAAGCAA
CATACATGTTGGATATAATTAAAAACTACACTGACTCCACAATCTATGTC
TGTGGATAGAACACTCAAAGATTAATTTCCTTCCCTTGTTTTAACTCGAt
cacattttaatttttttaagttttgccatCAATTGCAAGATTGTCCACAT
CAAAGGCAATTGAAGATGGTCTTTACTCTGGCCCTGAAATCAAGACAGCC
ATACCAGGTCCTATTTCCTTGGTAAGACTAGAAATGcactttaaactttc
aaaaaaagacaagCTTGATATTTTGTTCCAGTTCAACTTAATTATACCTT
TTTAAGTCATTTGCAGTTTGATTTTTCGTCCAAACATTGTATCTTTTCTG
ACATGCAATATTCTATTCTTCATTCAGGAAAAAAAGAGTGAAATGATTGG
TTTGAATGTAAGTTTAGAATGAGAatgtaaattattttcaaccCCTCTCA
ATTTTATCAAGAATAGAGAATTTCTAAGTCAATAATCTgttccaaaataa
taaaatgcaAACACTATTTTTAACAAACCGCTCTCTAGCACGTAAATCTG
ATAGAATATTCAGAGACATGATGATTGGTGTCTATACAGACGGAATGAAT
GAAGTTTCAAAAAGTCTAACTCTTAATAACGTATTCAGATACATATCatc
atttcaaatttaatcaaattccTCATCCTAGGCAAGTGCTGAtgccatct
tcttctttgttgATTATGCCAAATCCAAAGGAAACTATATGGTTGATGTT
GATGAGAATGTAATTTTAGATGCTCATGGACAAATCTCTTCATTGCCTTT
AGGTAAGACGTTTTAGTTTTTCTATTTGTTTCAATTAAGTTGGTAATCAG
CGGAATATAGCCAGAAATAAGTAAACAGGTTTGGTGATACATTGAGAATT
TATAATGCTTGGTTCCTCTTTTGAGAAAATCCAATTTAAATTTCAGGTTA
GACAGGATCttgttaaataaattttgtttgagtTGCATTTTACAATGTAC
TTTGAATAGCttcttctttgtttctaaggtTACAACCATCCCGCTCTTCG
AAAAGCAGTTGAATCAGATGATGTCAAGGTAAACACCACTGAGCTCTAAC
TCTGAAATCCCCAAGTTAATAAGGGTGTGGATCGACTCACTGATCTCAAA
TAACTTGACTAGATTTTTGCTTCCTACAATAACGGAGCTGTGTCACTGGC
TGGTCCACCATTTCGTAATCTATTCCGCTTGACGACCTATGAGAtttgaa
tgttttgtaattcgaaaaaaagggaaaatggAAAACAAGGGTCCATTTGT
TTCATCACCTTTTATGCCACTTATGCCACTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCGACATAATTTATGCGACCATTATTGACGTAACTAAGAGTTCGCAAG
ATGGtagattttcacatttttaacaCGGTTTCCATTTGTTTCACACGATG
GTGGCATTCGGGGGAAAGATGGCAAAAGTGGAAGTTTTGAGGTAAGAAAC
AAATGGCCCCCAACATAGCCGGCTAGTAGACTTTGAAACTGGACACATTT
CCGTAGCAAATCTATGACCAATTAGCCTATTTGTTGTGTAGTACTTGTAG
TGGTCTAATGTTGTCAAGTCATTACATATTACCTATAATCAACATTATTG
AACCCTGGTAAACTCAATATCCTGTACTGATAAATGATGATAATTGGTAA
TACCATGTTGAATTCTATAACTTTCCATAAACTCTCAGAATTATCTGATC
AATCGACCTGTACTTGGCATACTTCCACCATCAGATACCAAAGACCTTCT
CGAAAAAACATTACTAAAGGTATCTTTAATAAACTTAGCTAACACAggca
acgttttttcaacgttcatctaacgttatatggacgttgttaACATTAGA
TAAACAGCTGATACTATCTAAAGTAGCTTCTAGAGTAATTCTTTGATATA
GTATTATCCAAGTCTTGCCTCCTTGTTTCCAATGAAACTTATGCTAATCA
ATATGTTCCCTTTTTTAAACTATGTTTGCTGTAATTCTCATTAAAGCAAA
TGTTCTTTGTTTGAAATGCCTTGTAAAAGGTAATTGGTAATTTGAGTCCT
TTTCCCTTTTCCTTGAATAACCAATCGAGGATGGTCAACTTTGAATTTTA
CAATACATTTCTGTAGGTCAAACCAAAAGGCATGGATTACGTTCAAACAA
TGATGTGCGGTTCCTGCAGTAATGAAAATGCCTTCAAGAGTGCCTTCATC
AAATATATGGTAACCAAATAACAGATGATCCTGGATGATCACTATTTTCT
TACGTTCATcacagaaattaaaaattaagataaataagataaataatcaa
ttctataacaagaatcttgttacGTGCCGTGATGTCAaaaattgtattta
tttttgataCAGCGCTCTGTTAACACAACCACGCAACTTTTTTGTCATTC
CCAGTCTTCTGAAGCGATGCTCGGTCCTTACAAATTCGAGATAGCATAAT
CGTCAGATCGTTTGTTTTTACCCAtttctttagagcttcagcgtagtggg
cagaaaacaatcacgtTCTGATTTCTCAGGTTAATATACGGTGAAAAAAA
ACTTGCTGATTTTACAATGAAGACTTTCGAGACTTTACTGTCCGATGAAT
ATCTACTTTGTTGATATACCTGCTGTATCTATTTTTGATTGGTGAAAAGA
TTGTGACAATCAAAAAAGACTCTTATAatgattgttttcaaaaacctcAT
TGAAAAGTATTGTAAATTGGAAAAAtcttgtttttcatattttttagaaC
GATGAAAGAGGGTACGAGATGCCTTCTGAAGAAGATTTACTCTCGTGCAT
GTCTGCACAGGTTTGTATGTACAAGTTTCAACCTTTTATTGAAATCTAAG
CttgagaccatgttcagacgttacggtttcgtatcgTTCCGATATGGTTA
CCGTTACGGATTGagagtgttcatatcggtttcGGAatgtttcggagcaa
gaaaacggaacAGTTCCATCCGATGAAAATAGTAGAGGGAACCGTTTCCA
CCTgctttgctttgtaacgtcttcttttttgacgtctgaaatttgacgtt
cacacttgctACGGaatcgtttcgtttcggaatTATACGGAACCGTAatg
tctgaacatggtcttattcAATAGACCATTTCACAGttgaaatgaatcat
gggtaatcaggactggttGCGCTCTAGTAACGACTTCAGGTTGGCTAGAt
gtaaaaatcttcaaaactttggaccaatagtacgtcgtcattagcgcgca
gtggtcctgattacccaattaaagctttgcgactgtgaaatggcctttTC
AACACATTCTCTTCTTGATGTTGAAAGCATAACATTCTGGAAAAGAATGG
AAACAGTCTGAAAACCTCAGGAGTTTATACCAGTGCTTAAATTGGGCCTC
CGAATAGTTAGAAAAATACTAAAGTTGAGCCCTGTGCAGTGTGTACGTTC
GACTTTTTGCTATCAAGTGGAAGCCACCCTCAAGGAAATTTCTCTAATTG
CTGACATGGTTTCCACACGATAAAGAAAGCGTGCACGGCTAGAAGCGAAT
TGACAAATTAGTAATAAGTCTTTATCAACATTATGAATTATTTTCTTACA
GGCACCAGGAACTCCAGACTTGGTTATTCTTTCGTTCACTACAGGATTCC
ATGGACGAACCATAGGTACTTCcacataaaaaaaaaacttaaaatcccAG
GTCTGGGAAATGGCCATTTCCTAGGACAGGACTGGGTTTTCNAAATTAAA
ATCCCAGGTCTGGGAGATGGCCATTTCCCAGGACTGCACTGGGTTTTCCA
AATTTCAGGGTGTAAAATGACGATTTCTCAGGCATGggttttccaaattt
tccaggCCTGGGAATCTGAATTACCCAACTTTGAATTACATTTAATAAAT
TCTAAATgtatttcatcatttttaattaaaatgcCTAGGCTAAaaatttt
ccatatttctttctggaaaagcccaataaaaTTGTCATAAACCAAGGACA
ACTTAATGTAAGTTTCGGTTGACTGTTTTGAAGCCAACTAAggtattttt
ataggtttgacGCTACTTACTTACTTCCCTCATTTAGGTAAGCAAAATTC
GGCAGTAGGGGTTTAAGGACCAAAATAAAAGGGATCGGCGTTAGCTTAAG
GTGGACGCAGAATAGGCTGATCAAGATAGCAATATTCGTAGAAAACATGA
AAGTTTGAATAAATAAAGTACCAATAAAACAGCTTCTGTCctttcttttt
gctttatttttcgaGTCGATTCATCTTTCTTTTAGGTTGTTTAGCAGCTT
CGAAAACGAAACCAATGTACAGAGTTGATATTCCGATCCACGACTGGCCA
ACTGCTGACTTTCCTCATCTCAAATACCCACTGAATGAACATGAGAAAGA
AAACAGAGAAATTGAGGATAGAGCGCTTGAAACGGTATGTCGATTAAACA
TGAAGTTAGCAAGAGAAAACTTTTAACGGAGGTCCAGGGGGGGTCAGTGT
ACTAGAAGgcggcatgtatgtgtactacaaggtatttttcaaaacttgac
acccacccacccctgaagtacaccatactacatagaaaaatcccaaaacc
accccataccccctatttactaccgggtagtacctggaaaaaaaacaaaa
ccaccCCATATCCCCCATTTACTACCGGGCACTACCTAGAAAAATCCgga
aaataaagaaacttttttcggaaaatcgggtaaacatttttccaaaaatt
gggaaatcgggaaaactttttttcggaaaatcaggaaatcgggaaattgg
gaaaacttttttccaaaaatcggaaaaacaggagaatttttctcaaaaat
ccaaagtgcgtgagaaatcaaacttttcaaaaattgcgtgagaccATGTA
GAAATGCGTGAGTCTCGCacccaatgcgtgagagttggcaccaatgttga
atgtttgaattcaaatgttcgaatgtttacattgactcgATAAACCTTCA
TTTCAGTGGGATTTAGTAGGATTTCAatttatttcaagaattttggaaga
atgatcttggacaaacttggcttgatcaatttataatagaacaactttac
atttctattttagcacctttttgttttcacacttttaacatcgattttgg
acccaacacgcctattttggtacacaggtagtaaaaatcaaattcgattt
tggacccaacaccccaattatagtacacaggtagtacatgacaatgtttt
ttctcaaacacccacccaccccaggatacatgccACCTTCTGGTACACTG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNgaatatttttccccgacgaaaattttc
cccggccttaatgcgtttaccaactaccagcaagtgacgaatatttttcc
ccgacgaaaattttcccgacgaaaattttccccgacgaagttttccccga
taaggtatatagaGGCTTTTCCACCTTAGTGTTCTGTATGATTTACCAAA
GTTTCAAGCTCTTTTCAAGAATACGTGCTAATTTGtttgtaaaaatcatt
ttacgtctcaaaacaaaataaaacatgcTTTGACCACTGTTTTTAGGTCC
GTAAAACAATAATGGAATCCAATGCACGTGGTCGAAAAGTTGCAGCAGCT
ATCATCGAACCCATACAAGGAGACGGAGGTTCGAAGATATTATGCTTTCT
GTTTTTACGACTCTTTTAATAGTTTGGGAGTTGTGCTTTACATTAATTCC
GCAAAATTTATAGTCCAGTCTCTTTAAATGTGTACTCACTTTTACTATAA
TGTGGAAAACATGTTAACGAAATTAGAGTGGTTTCCACACAGAAGCAAag
aagagtgcacacttaaaacGAATGAACTTTAGTAAGGAAAAATCTTCAAC
CAAAACTTGTCTCTTCTTAACTGACATAAGTTTTACCCACGAAGATATTT
ACAGGCACAAACAGGAAATATTTACAGCATGATTTCATGCGCCATATGAA
AAGAATTGAATTAAACCAATACCTTGGTTATGGATTAACTGCTAGTTATA
CTTTTTATCTAGTTAGCTACAAGTGTATCAGGCTacaatccccccccccc
caaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGCccacaacccccccccccccaaa
aaaaaaaaaatctagagACAAAAGGGTTCTAAACATTTTTGCAAGATAAA
AATTCGTCCCTTGGATTATCAGTGTTGAGTCCGGAAATGACCCAGAACTC
AACGCTGACAGTGGGGAAAGGGGACCATGTGAAGTGTCTTATATATAAAT
TGGGGGATTGTAGGTTCAAAGCGTGTTGATAAgtataaaaaacaaacaca
tGTGCGTCAAAGCTCGTGAGTAAATTGACGTCTGTTTTTGATCGTGTTTT
AAATTCCTGGccgtgttttttatttttacctcTTTCAGGTGATAACCATG
CGACGCCCTATTTCTTCAAAGAATTacaaaagattttgaaagagGTAGAA
AAAGAAAGGTTAACTAACGAACTATTTGTGCAAATTTTACTCATGAAAGT
ATGCAAGTGAATCAGCCTTAATAACCCGTCTCCCCGGTCTCCCATTCTCA
ATAGAACTTTTTTTACAGTGAGAAATTTCTATCTAAATCCTAATGAGGAT
AAGAATTCTATTGTATCCTCCAGCTTAAAAAAGATCTTCTatgaatggtt
ttggagtgcgaTTTTCCGATTGTGAACTTCAAGTCAAAGTCATGGGGGTC
CCACCGGTTCCATGGCACTATGGTGTATGAATCTAAGTATTATAGCTTGA
TAAGAGGATTGAAAACATTAATTTCAAATATGCGTTCGTGCGTTACTGGA
GAAAGATGACCGGGGAAATATaacctttcttttgtttaaaaatgagaCGT
GAGCAGACGACAAAAGCTACGTTAACATTATGGCCTTTGAGTttctccct
atcactttcacaTGATTTTCGTACATCTTTCTCACAGTTCAATGCAGCTT
TCATTGTTGATGAAGTCCAAAGTGGTGGTGGTGGCAGTGGAAAAATATGg
tgattttttacattttttcattttcagtaacagcttcttttgttgttgtt
ttttttcgaaattttcctAGACTTTAGCCAAATAgccaaataaaaatgaa
aattaagaaaatcgTAAGAAAATGTAATTTACTTATGTAATTTGATTTAT
CTGAATTCATAAGAAACTTATGTAATTGCAGTAATCCGTATATCGTTCGG
ATTAAGGTCCAATTTCATAACCCAAGGGAATTCTTAGTATTTGAGATTTG
GATTAATTTCAAGAACGCCAATAAGATTAAGGGTTGACTCTACAAAGAAC
GTATGGCATTCCAAGTATGGCCTTCCATACTTTACATCAAAGAAGTAAAA
TCGTTTATGATCTTCATAAATTATTCTTAtcaatttataagaacacgagg
ctgaaaatttttcgaaacttaaaagaaaattaagaacCATCCTGGGcctc
agatttcaaaaaatgctaaaaaataacAGATTTTAAACTCATTCTAAGtg
tattaagaacatcgtaagaacaattaagccttaaaatttcaaaaaattaa
gaatagcTCAGCCTgggccaaaatttactggttcttgtaaaaaaagcgtg
tatataaCTTTGATTTTGTAACATAACACAGGGCACATGAACATTGGGGG
TTAGAGGAACCACCAGACATGGTAACGTTTGCCAAGAAAATGCAAGTTGG
TGGTTTTTATTACAAGAAGGATTACCTTGTCAAGCAGGTTTGTCAATTGT
TATAATTTAAACCTTGGAATTTTACAAGGTTCTGCCGATTGAAGTCTTAC
CACCAGgttttttgaaggtttttttctatgtttttagATTGGTCAACTTT
TTACGGTTTACCCTAAACTTTCTTTTGTATTGCATGTCTTGATAGTTCAC
TAGTTCAGGTAGCGATGTAACGCAGGTTTTGTCTNTATTGCATGTCTTGA
TAGTTCACTAATTCAGGTAGTGATGTAACGCAGGTTTTGTCTCAAGACCA
ATTAACGCTTCCCTATCGTTATTGCGCCAAAATCGTACCAAATCTTTAAA
AACCTAAATAATATCCTCGCAAAAGGCCTAAATCCGAAACCTCATATCAC
TAAATACAACGTCTTCCCTCTCCCAAACCAACAAACCCCAAAGTTAAATT
TAATCTAATTCTAATATTGTTCGGTCAACCAACCCTAGCCCCCCTCCCCC
GAAACATCCCTTTAATATAACAACAAACAGAAAATATACAATTCTCAAAC
TAAACATTAAACGAATTCTCAATCAAAGATATGCATAACTTAATGTCCAG
TTCTAGGtttattttaaaacaataacaaataTCTGAAGCTGAATTAAATT
TTACcctaatattttcaaaaataggaACTAAAGATGTCCACTAATTAGGA
ATATAACTATATATATACGATGCGATTACAAAAATATGCATATGTCACTG
TTCAGTACCCCgggtatcagaggttaagttttcaaagaatatattaacct
ctgaagaccaataatagaaattttatcgggcatgtgtcaatctaatcact
gtagaaagaatcaaagatgaagagcaaatattaccttatttatgtctagc
agactgtatcagtatccagtttactatttacgaattccccagaaacctcc
aagtgtaattgaaatgagtttctttcaaaagaaatcttttacatgatccc
caaatgtataacagtaattactaaactattaattatggaaatgtcacttg
aattgaatcgaaataatagacagactttatgttatgattctctatcactg
actctttttaaaaagcattgatgatattttttagttgtgttttcaacgac
gggaataaaaatatcaactttgaacttcatccaagatcttggatggtcgt
catggttacttttgtttttgttgattgcgcgctgaatagaatctcgattc
gtcggcacagcgtcgatatatgatttcgacctgtgcttttcacggtaaaa
gtttgtacgcttaaAATATAACACTCACTTAAGGCTGTAAGATACCCGCA
ATACAAAAGTTTGCTTTTCTTGATCAGTCTCCTGACGCGTTTGTAATCTC
TGAAGTCACTAACATCTTTCATGAAAGCCGGTGTAAACAACTCGTCAATC
TCTCTTAACTTGTATTTAACAGGAACGGGCGTGTCCTTAACGATAGACGC
CCAAGTCATCGTGTTACCATCTGCGTTCAGCTCTAGgtatatttcaaaac
aaatacgAAAATGTTAAAGcaaataattttgattattgTAATGATCTTAA
CTTTATCATTGTATAATCATTTGTCTAGGTTGGCAATGACCACTTTCTGg
aaatcaaataaaaagtaaaatcctGTAAGTTTCTTaaacttcaaataaaa
atactAGAAATGtttaaataataaatttaaGTATTAAACTCTAAACAAAA
TTACTTAATCAATGAGGTACCGCCAAATAAAATCGATTGATTGTTGCTAG
CAAGGTAGAAAGGAATAAGGTAGATTAAACAATAGCCCAGCACATAGTAT
GTAAAAAAAACGCGACAACTACCTTTTACTCAAGATAACACTGATTGTAT
GAAGAAAAGTTTAAAAGGCTATTATACAGGACAAATCAATTGACGAAGAC
ATACGTAATACACGACCTACTCTGCACTTAGCGAGAAAAGAATTGAAAGA
AGAAATAATGATGTAGCAAGTTAATCAAAGAAGCCATAAGTCTACTCAGT
ACGTACCAAGAATATCTTTAAAAGACAACGAAACTAACCTTAGAAATGAT
GATGTATTGAACATGATTCACTTTGTACATAGCCATATCGTATTTTCAAC
ACGTTCATGGGTGATCCTGCACGTAACGCAATGTTAAAAGCCATCATAGA
GACAATCGAAGAGGAGAACTTAATGCAAAAAGTGACAAACACtggaaaat
atttcttggaacaACTGAAAGGGCTTCAGGTATGCTATTGATTGGATATT
GTTTTTGAAGTTACTTTGATAATGATCTTATAAGCCGGCTcagcagtagc
gtggtggcagggggcaAGGGCCCCTCTCCAGCGGCCGATTCTCTTGGGGG
GGGGCGCTGAAATAAAAAGGGCGCAAAAAGACGCCTCTGTTTTCTAATTT
TAGCGCCCCTTTactcttttacaccttagatatcgcatttttttggccaa
aaagagAATACCCCAAAACATTCCCCATCTTGCGcgaattttagtcgacc
caccacgctactgcggATCTATTCGATTCTTCGATTAAGATCGTCTGGAA
CATTACTATTTTTTACATACACATTCAAAATATACTTCAGAAattacaca
ctttttaacaattttcaaataatcCACAATCATATTACTATTTTAATTAG
GAGAGCAAACCTGACCATTTTATGGATGCTAGAGGTGTCGGTTTCCAAGT
TGGTATCTCATGCAAAACACCAGAAATCAGTTCAAAGATTTATCATGAAA
TTCGACAAATGGGTAAgttatttgaaaaattccagattttaagttttgct
tttcaAATGTTTCTTCAGGGgtcgtccacatagtacgtacgcactaaggg
aaGAGGGGGTCTTATCAAAAGCGTATACTTGCGTACAGAGGGGAGGGAGG
GGTGAAAGGAAAATGTATGTACGCAGAGAAAAAATTTTCATAGCCCTTTT
TTGCTTGATTTTTTTGTCGACTTTTACGCTTCTTATACGCATCAAGGAGA
AAAAACGTTTCTCAACAAACATTTTCATGAGTTTCATGTATGAAATAAAG
GTCCGAACCAAACGATTTGAATTCGAAATTTTCTTCAACCGGGGGGGGGG
GGTAAatgaaaaagtacgtacttacgaCAGGgagggtatagccatttgcg
tacgcttgcgtaccgGGGGGAGGaggtactcgattttcgacattttaatG
TGTAcgactatgtggacggccccatgatgaaataattttgtttaTCTATA
TACCCTGTGGGGGGGGgtggcactcgattcaaaaaacGACCGTAGGTGCG
GCCCGAAATAAGGCCTTTGAAATCTGACCCCTACAGTGCAGACAGGGTAA
ATTTAGCCAATTTCGAGcaaatttgggcgaaaaattgaccttacagtgta
tttttttaaatattattagccattttaaggcaaaatatattcaggttttc
caaattttacacccttagagtgtaCTTTTACTCATCTTttctcatttcga
cccttacagtgcactttaggaagcttggaaaaaggtcccttaagggccgc
acgtacggtaggtcgtttaccttgagtgcctcCCCCCCATTGCGGGTATA
TACATCGATTTGATATGTTATTCGATTGggatcaaaagatttttttccgt
GATCCATCGCTCGCATGACTATCGACTAAAAGTTGGGTCTTCTAGCATAA
TTTGAAGAGGCAATTAAAATGATATAGAGCTGAAAGTTTTCTCTAGATCT
ATGCCTCAGGatgaaaatcactaaaaatgaGGTTAAGTGAATTAAAATAC
TTATTAGTCTTCATTTTTGCGTCCATTGATTCTTTATAAGACtttacttt
aaaaaactttaagtTTGCCGTCAGCCGATCGACTCTTCTCTAAACTTGTC
GATCTAAAAACTTCGATTGCTTTTTCGAcgaagagattttttttcttcaa
aaattacaaaatgtagaTAACAATTCCATGAATGACCAAAATAAGAAAGA
TTTCCGATCGACCGACCCACTTCCAAAATCTACGGttgggtgacggcaaa
ccaagaattttttaagtccagcctaatGATGTTTCATCTTTTAGGTTTGA
ACACTGGTGTTAGTGGCACCCAGACCATACGATTTCGGCCATCACTGATC
TTCAATAATTCACACGCTGACCTAACTATTGACATATTGGATGCTGCCGC
TAAAAGGATCTAGATAGTATGATCTAACTACGTGGTTGGATCGGGTTTTC
AATAATAACGGAactactttaaccggattaaatttcgcgagcgaGCGAGC
GAGCGAAACAAATCACGAGCGAAAAAAACctcgaaattttctggatttaa
tttcgcgagtcacagtttttaaaaatttcgcgtggacttaattttgcgaa
taaggctaaaaacagctgaaaaatagccattttttgccacaAATGGAGAC
TTTTGATTGGTTTCTCCCCCAAAAAtacgattttaaaaattttgtagtgt
atttaattttgcgaatcagAAATCTCAAgcgttttcgcgaaatttaattt
ctcgaaagttaatccgattaaagtatgtCCAGAGCTTCAGAACCAACTAG
TCCACCATGATGTCTTAAATTTTTGATATAAGACAAAGGGATTCGAGTGT
TTTGAAGTTAAAACTTTCGACGTAAGACAGAAACAACATCACAGACGAGT
CAACTCTAAATCTAGACACGTTTTCAAATGGTCGTGGCTTGTTCACAATT
ACGAAAGACACATCtagacttatttcgtacttttcaGTCTCtagttcgta
gtttttctgacttttgggACTTTTTGGTCAAATGAAATCTGTGGGCAGAT
GACTTATCAAATTAGCAAAGGAATATGATGGAATAAGACATTCCTTCAAA
AAATATAGTTGGAAGTTATGTTGGAAGTTTGAGTTCagttttattgaata
tttttaaaataattttaacatAATACTTTGTAAATAGATTTATGAATTTG
GATTGGCAAGCTAGGGGGGCAAAAATCCCTGTAAGACACTGTGCATTGAT
CATAGTTTAAGCCTTATTTGGATCGTTTTAGGGTATTGCAACACGCATTT
ATCGAACTTTTCCCGTATATAACAACAAGTTATACTAGTTACTATTGTTG
CTAGGGACTGAATTAGAGGTTTGCTGTACTCCCAAGAGACTTTGGTCAAA
AAGGTTCAGCTGCATAGGtatttttataattaatttttacaatTGTTTTG
TAAGTAAGATATATTTTGATTATTCAATCGTTATTATTATTCAATTatta
tacaacttttttatcaatctCAATACCCACATCCACACACACATTTGTTA
CGATATACTTGGTATAATCTAAAATTGTAAATAGTGCATCCTGATTATTT
TGTCACTGATAAATCCTTCAAGAGAGATACTTGAAGTACAGaaaactttc
ttaaaaataacattttgatCGATGGtacatttaaaaagaaatgagTTTCA
CTTTTTAAAGAGCGCTGCTAAATTTTATAGAGCGATTTTAATTCATAGAA
GATTGTTTGTCCATTATTTGTTaatgtagcctggatatccaagctcaaaa
ttttagaaaaaacaaaatttacctcaacatacaaagttctaaaattatag
agc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034045XLOC_034045Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053924-exon-scaffold_237-1491911889:103432..103541TCONS_00053924-exon-scaffold_237-1491911889:103432..103541Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:103432..103541TCONS_00053924-exon-scaffold_237-1510915933:103432..103541Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:103432..103541TCONS_00053924-exon-scaffold_237-1575043694:103432..103541Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:103702..103802TCONS_00053924-exon-scaffold_237-1491911889:103702..103802Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:103702..103802TCONS_00053924-exon-scaffold_237-1510915933:103702..103802Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:103702..103802TCONS_00053924-exon-scaffold_237-1575043694:103702..103802Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:103959..103988TCONS_00053924-exon-scaffold_237-1491911889:103959..103988Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:103959..103988TCONS_00053924-exon-scaffold_237-1510915933:103959..103988Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:103959..103988TCONS_00053924-exon-scaffold_237-1575043694:103959..103988Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:104263..104383TCONS_00053924-exon-scaffold_237-1491911889:104263..104383Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:104263..104383TCONS_00053924-exon-scaffold_237-1510915933:104263..104383Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:104263..104383TCONS_00053924-exon-scaffold_237-1575043694:104263..104383Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:104610..104659TCONS_00053924-exon-scaffold_237-1491911889:104610..104659Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:104610..104659TCONS_00053924-exon-scaffold_237-1510915933:104610..104659Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:104610..104659TCONS_00053924-exon-scaffold_237-1575043694:104610..104659Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:105620..105700TCONS_00053924-exon-scaffold_237-1491911889:105620..105700Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:105620..105700TCONS_00053924-exon-scaffold_237-1510915933:105620..105700Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:105620..105700TCONS_00053924-exon-scaffold_237-1575043694:105620..105700Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:106048..106140TCONS_00053924-exon-scaffold_237-1491911889:106048..106140Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:106048..106140TCONS_00053924-exon-scaffold_237-1510915933:106048..106140Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:106048..106140TCONS_00053924-exon-scaffold_237-1575043694:106048..106140Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:106679..106741TCONS_00053924-exon-scaffold_237-1491911889:106679..106741Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:106679..106741TCONS_00053924-exon-scaffold_237-1510915933:106679..106741Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:106679..106741TCONS_00053924-exon-scaffold_237-1575043694:106679..106741Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:107533..107596TCONS_00053924-exon-scaffold_237-1491911889:107533..107596Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:107533..107596TCONS_00053924-exon-scaffold_237-1510915933:107533..107596Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:107533..107596TCONS_00053924-exon-scaffold_237-1575043694:107533..107596Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:108217..108365TCONS_00053924-exon-scaffold_237-1491911889:108217..108365Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:108217..108365TCONS_00053924-exon-scaffold_237-1510915933:108217..108365Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:108217..108365TCONS_00053924-exon-scaffold_237-1575043694:108217..108365Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:109578..109659TCONS_00053924-exon-scaffold_237-1491911889:109578..109659Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:109578..109659TCONS_00053924-exon-scaffold_237-1510915933:109578..109659Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:109578..109659TCONS_00053924-exon-scaffold_237-1575043694:109578..109659Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:110470..110525TCONS_00053924-exon-scaffold_237-1491911889:110470..110525Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:110470..110525TCONS_00053924-exon-scaffold_237-1510915933:110470..110525Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:110470..110525TCONS_00053924-exon-scaffold_237-1575043694:110470..110525Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:111019..111080TCONS_00053924-exon-scaffold_237-1491911889:111019..111080Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:111019..111080TCONS_00053924-exon-scaffold_237-1510915933:111019..111080Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:111019..111080TCONS_00053924-exon-scaffold_237-1575043694:111019..111080Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:111713..111818TCONS_00053924-exon-scaffold_237-1491911889:111713..111818Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:111713..111818TCONS_00053924-exon-scaffold_237-1510915933:111713..111818Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:111713..111818TCONS_00053924-exon-scaffold_237-1575043694:111713..111818Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:113914..114060TCONS_00053924-exon-scaffold_237-1491911889:113914..114060Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:113914..114060TCONS_00053924-exon-scaffold_237-1510915933:113914..114060Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:113914..114060TCONS_00053924-exon-scaffold_237-1575043694:113914..114060Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:114482..114593TCONS_00053924-exon-scaffold_237-1491911889:114482..114593Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:114482..114593TCONS_00053924-exon-scaffold_237-1510915933:114482..114593Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:114482..114593TCONS_00053924-exon-scaffold_237-1575043694:114482..114593Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1491911889:115926..117484TCONS_00053924-exon-scaffold_237-1491911889:115926..117484Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1510915933:115926..117484TCONS_00053924-exon-scaffold_237-1510915933:115926..117484Clytia hemisphaericaexon
TCONS_00053924-exon-scaffold_237-1575043694:115926..117484TCONS_00053924-exon-scaffold_237-1575043694:115926..117484Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:103432..117484 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.38293	1.99413	1.57961	1.33871	2.80816	2.34159	5.41566	4.91259	5.01608	5.67411	6.31106	5.09388	10.432	11.1606	10.12	9.94058	5.25113	5.45804	6.17548	6.53756	3.09481	3.69304	2.99464	3.63423	9.47251	9.58865	2.2315	1.65031	2.15786	1.59311
Blast
[Close]
BLAST of TCONS_00053924 vs. Swiss-Prot (Human)
Match: GABT (4-aminobutyrate aminotransferase, mitochondrial OS=Homo sapiens GN=ABAT PE=1 SV=3)

HSP 1 Score: 433.335 bits (1113), Expect = 3.222e-140
Identity = 217/471 (46.07%), Postives = 305/471 (64.76%), Query Frame = 2 
Query:   95 QHWHRVL-PSIARLSTSKAIEDGL--YSGPEIKTAIPGPISLEKKSEMIGLNASADAIFFFVDYAKSKGNYMVDVDENVILDAHGQISSLPLGYNHPALRKAVESDDVKNYLINRPVLGILPPSXXXXXXXXXXXXXXPKGMDYVQTMMCGSCSNENAFKSAFIKYMNDERGYEMPSEEDLLSCMSAQAPGTPDLVILSFTTGFHGRTIGCLAASKTKPMYRVDIPIHDWPTADFPHLKYPLNEHEKENREIEDRALETVRKTIMESNARGRKVAAAIIEPIQGDGGDNHATPYFFKELQKILKEFNAAFIVDEVQSGGGGSGKIWAHEHWGLEEPPDMVTFAKKMQVGGFYYKKDYLVKQPYRIFNTFMGDPARNAMLKAIIETIEEENLMQKVTNTGKYFLEQLKGLQESKPDHFMDARGVGFQVGISCKTPEISSKIYHEIRQMGLNTGVSGTQTIRFRPSLIFNNSH 1498
            QH +R+L P    +S + A  D    Y GP +KT +PGP S E   ++  +  +A+A+ FF +Y +S+GNY+VDVD N +LD + QISS+P+GY+HPAL K ++     +  +NRP LGILPP +  + L ++LL V PKGM  + TM CGSCSNENA K+ F+ Y + ERG    S+E+L +CM  QAPG PD  ILSF   FHGRT+GCLA + +K ++++DIP  DWP A FP LKYPL E  KEN++ E R LE V   I++   + + VA  I+EPIQ +GGDNHA+  FF++L+ I ++   AF+VDEVQ+GGG +GK WAHEHWGL++P D++TF+KKM  GGF++K+++    PYRIFNT++GDP++N +L  +I  I+ E+L+    + GK  L  L  LQ   P      RG G           I +K+    R  G+  G  G ++IRFRP+L+F + H
Sbjct:   15 QHSYRLLVPGSRHISQAAAKVDVEFDYDGPLMKTEVPGPRSQELMKQL-NIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIRNKLILIARNKGVVLGGCGDKSIRFRPTLVFRDHH 484
The following BLAST results are available for this feature:
BLAST of TCONS_00053924 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GABT3.222e-14046.074-aminobutyrate aminotransferase, mitochondrial OS... [more]
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