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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054103 ID=TCONS_00054103|Name=TCONS_00054103|organism=Clytia hemisphaerica|type=transcript|length=782bp
CCGAGTTTAGTCAATAATATTTCATAAATTATCAATAACTTACAAAAAAT
ACCTAGAAGAAATAGCACTCAAagatatcaaaataaattttccccGTGTC
ATGGTAATGGAATCATTAAATACTATTGGACCTTATCATTTCTCCTAGct
aataattttataatttgtTCTACGAAAAAGCATtcgacacacaacgttgt
tgcaacgttcatctaatggaTGTTGGGGACGTCTAATGAACGTTAGTAGG
GCGTTTTGAACCAGCTACCATAAATACTACTACTGCATCatgcaaattta
aaaaaatcaaatcatatATTTTTTCATACATCGCCGATGAAAAAGTAATT
GTCAATGTTAtgtttacataaattattgacTGCCAACGTCACATTAATTT
CTATTTGCAATATTTGGTATACAGTAAAGTCTCCAAAAGTTTCTTAAAGA
ACATCATTATTAATTTCTTTCGATTGATCGCCTAGCATTCGATTGTGTTT
CAATCTAATAAGGAATCGAGAAGAGTGTTTCCGGTTTTTATCCCAACCAA
TCAATGTTCGCTTTTTCGTCAACATGTCGAACCGTCCAATCAAAAAGCGT
TTTGCTCAAGGATAACCCAATCGTTTTACTTCCTCTACGAgcatcaacca
atcagattggaCAAAAGTTGCACGTCCTTGCACAGATCTGTCGCATGAGA
TCAGGAGATATTTTACAGAAACCAACTTCTTTGTACATGGGACAAACCAG
TTTTTGATGTTCACTGTCTCGACATCGATCTG Run BLAST on NCBI transcript from alignment at scaffold_24:142022..142859- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054103 ID=TCONS_00054103|Name=TCONS_00054103|organism=Clytia hemisphaerica|type=transcript|length=838bp|location=Sequence derived from alignment at scaffold_24:142022..142859- (Clytia hemisphaerica)
CCGAGTTTAGTCAATAATATTTCATAAATTATCAATAACTTACAAAAAAT
ACCTAGAAGAAATAGCACTCAAAGATATCAAAATAAATTTTCCCCGTGTC
ATGGTAATGGAATCATTAAATACTATTGGACCTTATCATTTCTCCTAGCT
AATAATTTTATAATTTGTTCTACGAAAAAGCATTCGACACACAACGTTGT
TGCAACGTTCATCTAATGGATGTTGGGGACGTCTAATGAACGTTAGTAGG
GCGTTTTGAACCAGCTACCATAAATACTACTACTGCATCATGCAAATTTA
AAAAAATCAAATCATATATTTTTTCATACATCGCCGATGAAAAAGTAATT
GTCAATGTTATGTTTACATAAATTATTGACTGCCAACGTCACATTAATTT
CTATTTGCAATATTTGGTATACAGTAAAGTCTCCAAAAGTTTCTTAAAGA
ACATCATTATTAATTTCTTTCGATTGATCGCCTAGCATTCGATTGTGTTT
CAATCTAATAAGGAATCGAGAAGAGTGTTTCCGGTTTTTATCCCAACCAA
TCAATGTTCGCTTTTTCGTCAACATGTCGAACCGTCCAATCAAAAAGCGT
TTTGCTCAAGGATAACCCAATCGTTTTACTTCCTCTACGAGCATCAACCA
ATCAGATTGGACAAAAGTTGCACGTCCTTGCACAGATCTGTCGCATGAGG
TCAGGAGAGNGATTGGACAAAAGTTGCACGTCCTTGCACAGATCTGTCGC
ATGAGATCAGGAGATATTTTACAGAAACCAACTTCTTTGTACATGGGACA
AACCAGTTTTTGATGTTCACTGTCTCGACATCGATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054103-exon-scaffold_24-1575043694:142161..142859 | TCONS_00054103-exon-scaffold_24-1575043694:142161..142859 | Clytia hemisphaerica | exon |
| TCONS_00054103-exon-scaffold_24-1575043694:142022..142104 | TCONS_00054103-exon-scaffold_24-1575043694:142022..142104 | Clytia hemisphaerica | exon |
| TCONS_00054103-exon-scaffold_24-1510915933:142161..142859 | TCONS_00054103-exon-scaffold_24-1510915933:142161..142859 | Clytia hemisphaerica | exon |
| TCONS_00054103-exon-scaffold_24-1510915933:142022..142104 | TCONS_00054103-exon-scaffold_24-1510915933:142022..142104 | Clytia hemisphaerica | exon |
| TCONS_00054103-exon-scaffold_24-1491911889:142161..142859 | TCONS_00054103-exon-scaffold_24-1491911889:142161..142859 | Clytia hemisphaerica | exon |
| TCONS_00054103-exon-scaffold_24-1491911889:142022..142104 | TCONS_00054103-exon-scaffold_24-1491911889:142022..142104 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:142022..142859 - |
Blast
The following BLAST results are available for this feature:
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