TCONS_00054292 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054292
Unique NameTCONS_00054292
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1954

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054292 ID=TCONS_00054292|Name=TCONS_00054292|organism=Clytia hemisphaerica|type=transcript|length=1954bp
GATAATCATCTCATTGCCGCAAACACTGAACCTTCTCCACAAAGTCTGAT
GATCCAACCACACCCTGGCGTACTCTAATGGAATCTTAGCCTCCATCTCA
TGCATACGATCATAAAACGAAGTCAAGTATGGGTTTGGAAAATAACCCAA
GCCCGATGCCCCGAAATGTGTAAATCGCTGGTGGAAGTTCGGTTGAAAAG
TAGAGAAAAAAGGATTTGGGTCTTTGAATGTGGAATTCCCGTAATACGTT
GGAGTGTGTGGTTTCATTTTATTACACGCCAGTCAAGTTCAACCCAAGAA
TACAAGCTCTGTTATTATTGCCAACCTTCTCAGCTTAGCGGTTGGAACGA
TCATTTACTGGGCAATCGGCTTCGCTTTCGCTTTTGGAGATGGTACGATA
AAAAACAGCAACTTCTTCTTATCCTATGATCGATTCTTCTTAATTGATGC
AAGCGATGATGATTATGCGCGGTTTGGAAGCGAACTGGTCTACCTGATGT
TGGTGCTGGTGTTATGTAACAGTGGATTTGTTTCCCGCATGCGCTATTGG
GTTTATCCGTTGTTGACACTCTTTATTTCTGGTGTTATATATCCTTTTGT
GATCCACTGGACAAAACATCCGGAAGGCTGGTTGAAATCTGGTATCGAAG
TAGAAATAGATGGAAAGGACAAAATATTAAGTTATCAGGATGACGGGGGA
GCGGCGTGGATTCACGTGCTCAGTGGTAGTGTCAGTTTGATCGGAACAAT
TTTGTTGGCGCCACGAAAAGATCGACAGGGAAAGAAATTTCGTCCAGTTG
GTGGAAACTTGACCCCCTTGATGCTAGTAGGATATTTCCTGGCTGTCATC
GGTTTGCTAGCCAAACAACAGACAGGTAAAAGACACTTAGCCAACAGCCT
TCTGGCGGCTGAAGGTGCCGCTTCGGTATCGTTCGCTTTGAAAAGGACTG
GATATTTTGGTGATCGATCATCGACTAAAGCTCTCATCAACGGAAGCATC
TCTGGTTtgGTGGCGATTTCAGTGCTTTCAAACGATTACCTAGCGTACAG
TGCATTCGTCGTGGGAGTGATAGGTGGTCTCGCCTTCACTGTATGGAGCG
CGCTTTTACAATTATGTCGAATTGACGATCCAACTGACTCTGCAGCAGTT
CACCTTGGTGCCGGCTTTTGGGCAGCCATCGCAAGTCCATTGTTTCGAAA
AACCGGGGGTATCATTTATGATGTTAGCAAATACAATTTGCAGATGTTTG
GTTGGCACTTGTTGGCAGCGGTAGCCATCTTTGTGTGGAGTGGTCTGACT
GTCTTCTTGGTACTCATATTCTTCGTGTTCGCAAGATCCATTAAATACAG
TGGCCGAGAAGCTGCAGAAATTGGTCTCGATCAATTGGAACACAAAGAAC
CAGCATATCCGGACCGCGAGCAATACACACCGGACAGAACTGACCAAATC
TTGGACGATCTTTTCTTAAAAGATACCGGAATGTATGCATACGATAATCG
GGCTTCACAAAACAGCGGAGCTTTCGATAACCGGGAATCAAGAAGAGATG
GGAATGAACAATTTGCAAAATATTGAACACGATCTTcgttttggtttttg
tttggaaaagaaaatcgaaaatcgaaaaaacgACACATTTTTTAATGCAG
AAATATTAAACATCTGTAGAAAGTTAAACAATAGCGAGGTTAAATAAATC
GGTATAATCACGTCAACGGACAAAATAATATGTAGCAGGTTTGTGAGTTC
caaccaatcaaattctgtATTTTAACTAGCCTATTACTATTTTCGTCCGT
CTTCGTGATTAACCTCGCTAAGTCCTGATTAACGATTTGGACAGTTATCT
GTAAAACAGGTGATAGACATCTTTAAGAGGAGGATGATAGCAATATTTTA
GATAGTGAATTAATGTATTTGGCGATGACAGCTATTGGAGGATGTGTTTA
gatc
Run BLAST on NCBI

transcript from alignment at scaffold_242:1736696..1755931+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054292 ID=TCONS_00054292|Name=TCONS_00054292|organism=Clytia hemisphaerica|type=transcript|length=19236bp|location=Sequence derived from alignment at scaffold_242:1736696..1755931+ (Clytia hemisphaerica)
GATAATCATCTCATTGCCGCAAACACTGAACCTTCTCCACAAAGTCTGAT GATCCAACCACACCCTGGCGTACTCTAATGGAATCTTAGCCTCCATCTCA TGCATACGATCATAAAACGAAGTCAAGTATGGGTTTGGAAAATAACCCAA GCCCGATGCCCCGAAATGTGTAAATCGCTGGTGGAAGTTCGGTTGAAAAG TAGAGAAAAAAGGATTTGGGTCTTTGAATGTGGAATTCCCGTAATACGGT AAGGTTTTATTGCCGGTAGCATACTTGTGTCCTTCTTTTTGTTGTCCGTC TGTCTGTTGAGACGATGCCATTTCATTATACGGCAAGCCGTTTTCACCAT AAGCCACAGGTTGATAACCGTACGAATTAGTCATTGGCGCgctattattt tcaaaattcggaatcatgttttttattattattatttcttaGCGCGCGTC TATGTGCGTTGATTCCTTTGAACTGACTGGCGGCCAGAGACGTGTTCGct cttttataaatttttgtaaTTGTAAGAGCGAGTGATTTCAATATTTCGAT ATTGTTTTTAGTGCTTTCTTTGACATTGGATTTCCATTATTCCGGGTTTT CATTCAAAACCTTTTGTGTGTGTGAgaacaaaagagaaagatttAATTAG AAAAGAAAACCTCTGAAAAGAATACCACCTCCtacaaaattgaaacaaaa aatccTCGTAGagcaagaaaataaaaataaaattgtataCTATACTAAGT ATATTGCTTACAATCAGagaaattctctttttttttcttataaatagttT AATATCCAAGGGTCAAGCCAAGCTTGTTTGACCAACGAGTGTTTGAAACA CAAGACCCGTTAAAAGACCTCACCCTCTAAATTCCTGTCAGCGCAATTTC GAGGTCGTGATTATAGGTGTTTGGCGTGTTCTATGTCATTTAAGAAAGGC TTTTCGgatcaaaaattgtttcttATAACAAATGCTAACTAAAGCAAGGT AGCTAGTAAGGTTAAGAAGTAGCCTAGTAATTATCGTTATCTTAGCAACT CAACAAGTCGACCTGTTTCAAAGAATGTCTCTTTTGTTCTGACAGACAAA GAactaaatcaaaacattttggtGATGTTTGGTGAAAATGTTTTAGGGGC GTGGATTGGCTCAAGCATTTTCTCATGCACCGAATGACACAACTAAGGGC GGGTCAAGGGGCGGCGTAATCAGGATGCTTTTTCTTATACAGTATACACA CACGcaatatatttttgctttcataTTTTCGTCTTATAgccgggaaattt caaaatgcacTCGGGTTATTTGTAattatgcttttttcttttttgctttt aaatgaAACACTTGCTTGATACCCTCCCCTTTTTGATATTGGAAGGATAT GTATGGTTCCAGAAAAATTGTTATTGGTGTTTTTTCTTCCTGTTTTGTTT GAGATGTTTGAGATGCATTACCAAACCTTTAACATTTTGTGacccttttt aaatttttgatctTTGATCTATTTGTCAGGGTTTAAAAGCACTACTGTAG TTGTTGTTACTATTGATATAATTTCattagaaatcagaaaaaaaaagtcG CAAAATTTCGTGGTGCAACTTTATCTGACAAAATGATCTTGAAAATTTAG TTTCTCAActtaagaaaacaaaaaagacgaGAAAATGCGATTGAAATGTC GAAATTTAAATCTTTTGTCCCCATATTACTTTTTGTTGATTTATTGTTTT ATGCGCTGGTATACAAACTCAGGgccggcggaagcggggaggcagcggag acttcagcctccccacttttttatttaagtttttttttgtttattagtAA TCAGCTATAAATTTGATTCGATTTTAGCCAATCTAAGGTGGCGCCCCCTT AGACTCTAGTTTTCAGCCTCTCCTCAAATTCGTTCCACCGTGCCGGAACT GTGCTTCTTGCGCATGCGTGTATTTGGTGGTGTGAGTTTTGAGACGGAAG ACACAATAAACTTGCAGTTGCTGAGACGTGGAGTGAGTTTCACGAAGATA TTCTCGAAAAAGCTTCAAGTCGTAACTTATCAAGTCCATTGACctacttt tcaaagaaaacgGCCGAAATTTTACCAGAATTAAGTGGAGATGACAGAAG TAGGCAGTTTTAATAGCCTACATGTGGAAATACAAGGACGAAATCTGAGA AAGTTCCCGTCTGTTATAAAGttaataaaaactttacaattactAATATA TTTAGATGATTAGATTCGATTTTTGGTTTcaatttttggacatttttgaA GATCCTGTGATTCGAAACATATGGTGTGAATATATCATTGAAAAACGATT GAAATGATCTTTAAGTCTGTAATTTGATTTCGCtttatttttcttgactt tAAACTACTCGAAATTAATGAAATTGCTGAACTAATTAAGACCCGTGTAG ACGATTTATACAAATTTGATGCGAGCCTCCAGGATTCTTTTTTTTCCCAG CGCCTTTGATTGACATGTTTATTAGGCTGAGAAAATTTATTTGCAGTAAT AGCGTAATTGCTATTAAATTACTCCTTTGTTTTCCCCGAATAAgccaaaa gaatatttaaatcttTTTCGATATGGGTTTCTATGGCTTTGgaaataaag aatttcaagaaaaatgaaaattaaagtttatAGTATGAGCAAAAAGAAGC AGGCAAGAAAAACTTCACACTTTGGAGAGTAAGTTGCTAAGCTATTTGAA TTGAGGTGTGATGTAGTCTTGTGATGGCATGTTTTTGCAAAACTGCTTCA AACAAATTTTCTCGCATCGTTTTGAAAACCATAAAAAGAATTGATGCTAT TTGACGTCCACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNcccccccccccccccctcagcggtttgcgtgaatgcgtac attttcggttgcgtggaTGCGCGAATCAAAAAAACTTACgggaacgtgaa aatccacgtCTATCTTtgtgtgaatacgtgaatttttcatctttccaCCT ATTATTTGAAAATGCTTCTTTACCAAGTCGAGAAAATATAGCTTTCCCTG AAAATCACATGCGTTTTTATGAACAAGCATACCCATAATTACAATCGCGG TCATCGCGGcacctttttcaaaattttctctctgaTTTCTAGTTAAGAAC AGGGCAggaacaccgaaacaccgaccGAAAAACGGCTTAATACTGACATA CCCCCGCCCTCATGGTGGTAGGCAGTACATTTATGCTGTGTTTTCTGTAG CCGAGATGGTTGGATTATGAATTGCgtatttttcctatttttggtTTACC AAGGAGGCCGAAAAATCTGCTTTTTTACCATACCTGATTTTACCGCGtgg tcaatatttttttcttctgttcCCTAACCTGCACCgaatagatagataga gtcgatattttacgtggatagcccagtaatataggacttttagacagtct ttcgattgttttcccGGGGTTCACgaccagccggctcggctatccatgaa ctgaacagaacattggaaggagcggggattcgaaccgcgaatccctggtt tgagacTTTGActacttggccatcgctccttgAAGCTCCTTTTTCGTATG AAAAGAACCGCGAAGTATGGCCTCAGAAAGGCAAAAGGGTTAGTTACTAT TTTGTTCTCAAACTTGGCTAGACGTAAAATAATTCCTAGTTTGACGTGTT GCTGAAATCTGATCGCTGTCTACATCTTTTTATGTTGTTTGTTTCGAAAC CTACcctaaataaaaactttttatatGCTTTTTTATTGGATGTGAACGTT ATTGAACGATTTTTCGTTGTAAACATTATTGAGCGATTGTTCGTTGCAGT AGCAAAAGAACGTTGACTGGAGAAAGGTTCTTAGTGGCGTATTTGTGGAA AGAAAGTTTTCGCTCATATTTGTAACGGCAGACTTAGAGTATAATGGCTT TTTGTCGCCTTCTTCTTTGTGGGTTTATCGTTCACTCAGTTTTAAGCTAT CAAGAAGGGTTATTTTCCACCAAGACACCCTACTCCTTTATCGAAAATGA CGAATTAAATGTCACGAAACCACACTCGGAATGCATCGTTAAACAAATTA ATATGGTCCATCGGCACGGACATCGATATCCGTCCGGTGGAGACACCGCC AAATTCAAACAATTATCGGATAAGATCAATACTGGTAGAGTTGCTCCTGG TTTAAACTTCACTTTGCCATGGTATTCTCCTTTCGAGATGAAACAGAAAT CAATGCTCACCAGAACCGGCGAAAAAGAGCTGTATGGTATCGGACAGCGA ATCAAAAAACGTTTTCCGGATCTCTTGAAAGCGGAATACTCTCCGGTCAC TCAATACTTTATGAGTAGTAATAAACTACGCACTATCCACAGTGCTAATT CACTAGCTTCTGGTTTGTTTGATGGAAACGGTGCCCTAGGTGGAGGACGG ATCCAGCCTATTGCTATCGATGTCAGCCCTAAAGATCCAAATGATCGACT GTTACGTTTTTATGATGCTTGTCCGAAATACATTCGAAATATCgatgata aaaatgaaacaattattgaatatttgaaatttcagaaaGGTGCTGAagta caaaaagtcaaaaagaaagtCGAACAGAAATTGAATCTGAAGGATTTGAG TTTCACGAATCTGGAAATGATTTACGTTGGTTGTGCTTACCAGCTTGGTA TGTTTGACGGCACCCTGGAATCGGGGTTCTGCGCCCTCCTTGAGAAGGAA GACCGCCAAGTATTCGAGTATGCAAGCGATTTGGAGAAGTTTTACACGGA ATCGAATCTTCAGAACCCGATCACTTATGAAATTGGATGCTTCTTATTAA AAGATTTCCTAACCACCCTAGAACAAGTGGTCGAGAATGAGACTGAGTCG GTTGGGATCTTCCGGTCAACACATTCTCAGGCGGTTACAATGATGTTTTC TCTATTTGGGCTTAACGAACAAACAACACCCTTAAGACACGATAACTATG TTGAACTGATGAATCGGCATTTCCGTAGCTCGATCATTGCTCCTTTTTCC GCCAACTTTTATTTCGTTTTATACGAATGTTCGGGCGAATGGAAAATTCA GTTATATTGGAACGAACGCTTAGTGAAAATGCCGTGTTGTGTTTCAGAGC TAGATtgtgattttgatgtttttatggACCACTATAAAGATATGGCGGAT TCGTGCTCAGAAACTTTTGATGAGCTGTGTGACCTTCCATCCACTAACGG GGCTGCTTCTTAAACTGTCGATTTTAACATTCATTGTGGTCAGCTTCTTG AATTTTGTgtattaatgaaattttttcttttcgtcGTTTTTTATTCCTCT GATTTCTGGGATCTCCTTCTTTCTTTTTGAGGATAGTCTGAAGTATTGCT CAATATTGATGCAGTAACTGGGCCTATAAATGATGCAGGGTTGATATCGA TAGTGATGCCTTCTAAGCTAGCCTCGTCTCAGTGTATCCCAGGTTTTATT TAAGGCGACTGATGAACGACATAAAATAATATCTGGAGTTATCAGTAAAC ATCAAATCTGATAATACGCAGGAAACGAGGTTGACCCCTAAGTATAGAAT ATTTCTTCTCATTTTGATCGATGTCCTTTACACTTGTCGGTCGAACTTCA TTTTCCCCTTGGTTGAAAATGCGGAAAGTTGGATCTAAGAATCTAAAACT AATGAGCCTACTCTACTAAATTTGGAAAACTAACATAATATCATTTGTAA TTTACCTATCCCGGGATAGTTGATCAATCTAATTTATTCAATATCAATGG ACTGTGTTTTAGCTATAAAATCATAATTACAGATTGAAAGTATTCAATGA TTTAGTCAATTTTGTATCaatattctatttttattttatgccaaattgat gattttataatgttatgaataatgtaaaaaatggtcaaaaaaattgattc acgttttgaaattatattagggtatttttttgatatattcgcgaatgaaa aatttcGATATGTGGAAATAATTTCTTTTCCCGCTTGTCACCTTGCTTAC TTGTAGTGAAGTGAAtgtgaagaaaataaatttgcttTCGTAGCAAGGGT ATGTCATCAGTTTTTACTGTGAAATTTCTTTGTGCCGGCAAAGATTTAGA TAACAAGACATACTGAATTCCCACGACTATCCAGCAAAATTCTTCAGGTA cgtttgaaatgaaattttgaaatattttcaatgattGGTTGTGTGAAGAC ATGTACAGTTACTGAAGAATTGTTTTATtccaacacccctgtctcacagc cccggtgaaactgtTTCTcacagcggggataaaattttccatcgtaatcc caatggggatagagattctattgttccaagcttaaaagatccagtgggga tggttttggagtgcaattttttacaatgaaatttgaatggggatgtaatc aaagtcaatttcccaatggggctgaaattttggggtatttttagtaccgg ggacgaaattttggtcaaattttccagtggggctggggtcccagcgggtc ggTGACACAGGGGGTGTATTCCATGAAATAAAGTGAAACCATTCATCGCC ATTCTAGCCCGAgctttgaattttgaagaacGTTAAagtaaccaaaatta tcaatatattttgacctaGATTGTGGAATTTTATCCATTTGAGATATCTT TTGCCATCACCAAGGTTTCTGATTacgtactttcgttttcatccAATATA GTTACAAATcctaaaaagaaacaaataaacTTCTCTCCTCGGCTAAAATG GGATACTTTAGAATCGAAAATCtttggtttttctttatttaaaaaaagca aaacggAATTAGTTTTTATGGTTGGTTTAGAGTTTATGATCCAAAGCCAA CTACTATATTTTTACAACGGTTTTGCTAAAGNGAGTTTATGATCCAAAGC CAACTACTATATTTTTACTACGGTTTTGCTAAAGTTTGAAAAGCTTCATA AGATAATTTGACCAGTAATGTCAATGGAAATCAGGAATCACGCTTTTCTT GTGTATAAAATCagtttttgatttatttttcatttagaaaATGAAGTCAT TTTTGCGGCTACTTGCTACCTTTTTCCACGCATATACTATGGTCTGTGGA CAGCAAGAAAAAGCCTCGTTCGCAATCAAGACACCTTACGCTTTACACGA GAATACAGACGTTTTGATACTCAGACCCCAACCTCAATGTAAAGTTAAGC AACTTAATTTCGTACACCGACATGGACATCGCTTTCCCTCCAAAAACTAC ATCCTAAACTTCAAAGAATTGTCGAAACTCATCAATTGGAAGGTCGAGTC GCCCCCGGAAATGGTGCTAGGTTTACCCTGGGAGCCGCCATTAGATGAAG ACCATAAATCACACTTAACACACGTGGGAGAGAAAGAACTATACAACATC GGGATCCGTACACGGAAACGTTTTCCGGAGCTGTTTGAGCAACGTTACAA CACGAGACGTTTCAAGTTCATGAGTACGAATAAGTTACGTACTACTCACA GTGCGACGTCTCTtgcagctggtttatttgatGGCGACGGTTCGCTACAC GGCAGGATTCAACCGATCGCTTTAGATATATCACCGAACGATTGTCGCGT ATTGAGATTCTACGATAATTGCCACCGCTATaaacaagaaatcaaaaaga acgCGATAGCCCTTTCCGAACATGAGATATTCTTGCAtggaaaagaaatc aaaaaagttgcGGACAAAATAAAGGTCAAATTGAACCTTCCAAATATACA GTTAACTCATCGTAGTTTGGACGCTATTTTCATCGGCTGCGCGTATGAGC TCTCCATGTTTGACGGNGTTAACTCATCGTAGTTTGGACGCTATTTTCAT CGGCTGTGCGTATGAGCTCTCCATGTTTGACGGTAGCTTAGATACCGGTC TCTGTTCTTTACTCGATGACGAAGATCGCCGGGTTTTAGAATACGCTGAT GACTTGGAGAAGTTCTACACTTCTGCCAACCCAAACAATCCGCTAACTTA TCAGATCGCATGTCCGTTATTGAAAGATATGCTTGATTACCTGCAAGCTT CCAGAGATGGCGACACCATGTTGGTTGGGATCTTCAGATCTGCGCATTCG ACCGCCATGTTGATGATGTATACATTGCTTGGATTAAACAAACAACATGT TCCATTGAGAAGTGAAAATTTCCAACATTATCTTAAGGGGAGACGACAAT ATTTTCGAAGCTCACAAATCACGCCGTTTGCTGCGAACTTCTATTTCGTC TTATACGAATGTTCGGGCGNATCACACCGTTTGCTGCGAACTTCTATTTC GTTTTATACGAATGTTCGGGCGAATGGAAAATTCAGTTATATTGGAACGA ACGCTTAGTGAAAATGCCGTGTTGTGTTTCAGAGCTAGATTGtggttttg atgttttcatGGAGTATTATCGAAAGATTGTTCAAGAATGTGATACTGAA CTTTGTAGAGAAAATGCAGAGAATATCACAATAAGTAAACAAACTGAAAG TCATCACCAGGCCTCCTCGGAGGACGATGGCAATTTCTATTTGAAGACGA TAACATTGTCTTCAATTATTTTCTCAGTGGTCAAGAAATTCATATTGGAT TGGATTCTAAACTATGTGAAACATTCGAATTCTAAGCAAGACTGAGAAAA AACACCTCATTTGTAAAcgcataatttttaaaagagTTGCTGTGTAAGTC CCAGCTTTGTCGTTGTGTTTTAAATGTTGCAATAAGCTAATTTTTTTGAG TaccctttttttgattttttaggaaaataagaAACAGAAATTATAATTTA CTTCGATAGATTCTCGTTgcatttactttaaattttttactTCTGTAGCT CTAAGAAAGGGAGGGCTTCTGAGGGGCTATTGCTCCGGTCTTTCGCGAAA GAAACTTTTACTGACAATTTCCGGTATTTCCCACTCTCTTAAGCCCCTCC CCATTTAGTATATTCATGATTTTATTTACCGATCAGCCGGTTGCCATGAC CACAATGTGTACTCGccacaaaaaagaaaagcattGCAATATTCGAAATG ACATCTTTAGCACGTTCGGTCAAGAAAGAAGCAAATTCCATGATTTCCTT GAAATATTGGGTTTTGAGGAGAAATTATACTTCCATCTTTATCTTGGATG TCTTGAAATACTTTAAGATATTAGTGATTCGCCCTCCAATGGATGGGTGT TTCAGGGCGTTTAAACAAAAATGTGAGGGTGCACCAAACTTTTTTCCGGT AGGAATTTTAGATAAAAGGTTAGGTCGCATGATGTTCTTACGGCGTCTTC AAATACATATAAGCATATTTATCTTCCTTGTTCTAATAGAAACAGAAAGC CTCCCTCGCTTCTGCTTAGATGTTATCAACAGTGGCATGAATCATCAATT CTCTTAAAAGTTTCGTTCAAAAAAGATCTACGTGGGAGAGTGAAAAAACC ACTGCTGTCCTATAGAAATTATAATTGCATTGATAATGTATTTAAAAGTG TCGGTTGAACGGACCTCATCATTTCTTATCATctatcaatttgaaaaaaa aaatctaaagagaGTGTTCACATTTTATTACTGTTGCTATTAATCGAAAA GAAAAACTTGTCATTTTAATGCCGTTAAGAATTTTATTGTAGTGGTCATT GAGGGACAATAAGATTTCTTTAGCTTATCTCTCTTCAACATAAAGTAGTT TTTTGCTTATTATGAGACAAATTGATACTAACCTCTAAATGAGGGGTTGA AACTTTTGTGACTGTTGTATATTGAGAAATAATTTGTAGAGAGGTGCGAT CAGACGTCTGTCAAGCATGGCTGCTGAACTGGTGATTCGTAAGTCATACT TAACTTTCATAACTTTCACAATGAACTCAGCTTTCTCATTTATAAACAGA AGTAACTTAAGTGTATTGATgtggacttttttgaaaaatttttaaaaatt cttgttTCTGGGTTCACCAAGACACTCGACTCTGTTTTACTtcgtaccgt aagttggtctaatatcgacatccctcgtctaattccgaaaaccttcttta gagacaggaataacaTGAAACCTTGAATCACTgtttgaaaaaggattatt cctctcgaccactaagcaaaaaaaaacagtttcaacctttctatcaagtt cagctgataaaaagggtgtctgaattagaggaggggtgtcgacattagac caagttacggtagggCTTGCTATGTCTTTACAGAGGTTGTTACTACACGG GATTCCTCTGATCAGATTACCTTTTATCAACTAACATTTAAGGCAACTCA AATTTTGATCCCAGGCAGGGTCctgagatttaaaaaaacaaatatataTT ACCTGgtgaaattttgcaataaatagaaagtttactttaatttcaagaaa attcagGGTTTTTGTTACGACATTTTCCATTTGGgtgttaattttcaaaa atttcggatAGCAGCAGCACATCTAAGACACTTTTTGAAGACTTAAGATA gccttttttacaaatttcgcaacaCTTTAATTAATCAATTAATGAAATTA ATGAACTCTTTTCCAAAACAAAAGTCGCCAAAATTTGGCAACGGCTTTCG GAAATTATAATGACGATTTTCTATGTCCAGGatgttaaaaatttgaaata aaaaaacgttatttttatcagtttgcgactgttttcttatttcttttgCC TTAAAAGCTGAGTCAGCACTTACTGAGGAAAAATGAAGAGACAAAAAACA TGCACAGTATGACCAGGCTTACAAATAAGTATCACGCAATCAAAACACTG ACCTGATGATATAATTATCTACGCTTTGTACATCACGGAaaacattttac tgaccagatttttttgtttttgaagcaTCTGCTGTTTTTCCCATTTAGCA TCATTCACTAATTACTTAGATTACATTTTGTGGTCAGTTGATTCCAATTA GCAATTTGTAAGATCTCGTGGgaaaatgatattttgtcaaTGAGTCGTAT CGAACTTGTTTTCGATGTATTTACGCCCCTTTTTGTGCTGAGGTGAGCGG TTAATGGAAATCAAACCATAATAATGCGTTTTTAAGCCGGTTACCCTACC GGACTATACTAGGAATCAGCCATATATGATAATTGAGTCGAGTCGAGTCG ATCATCCCACCAAAATTGAGCTAAAGTTGattatttcaattcttttctAT CAAAATCTTGCTCTTCCAATAAACGATATCAGCTTCGCATGAAAAATCAG ATTTGACCCTCgagaattgcccacaatgctttgtgcggaagAAATTTCAC CGTTAACTTTTTctgcgcaaagcattgtgggcaattctcggaggtcaaat ctgagttttcacgttaagccgatatcgtctattgaatcTTTGGTAAGGTA ATCGAGGTATcacaaagaaaaatcattacCACAAAATTAGATAGCAGGTC ACTTCAAGTCACGTGGTATTAGAAATAACTTACATTAGGTTATACAGTCT TATCTCTCGAATACGATCAAAAGCCGTTTTTTAGTATGTGACAGAAAAGC TTAACATTTTTTGATGTATTACGAGCAGCAACTAATGCTACCAAAAATAC ACTtttgtcaaaacaaaataatgaaatattttaaaattgactACATAAAA TGTCAATTAACTGCTTGAGTTTTTGCAAGaaccaataaattttgtccatt gAGTCCAGCGagactttaacccttctcatgCAAGAGAAAttaaaaccact tatttcccatccaaaactcGCATAGAACGCGTTGTAATCATGATggcgga ttgtatctagcggttcctttatTTTGGAGgactaaattttttgaaatcta gcgatagattttggTTTTAATCCGGTGTTTTTGTAAAAACTGCGCGTGGG CGTTCTGGATTGGAAATAGGTGGTTTcgtttcccatccaggagtttcgcc tctagcccttcgggcttgaaactcaatgattttGCCGAGCTtgagattgt tcttaaatttctattgttccacATGATTGTGCTATTACTCTGAGTGTCTA AATCTGAGGCTGTTGTTTTTAtaacattgttcttataaataaaaaaagcg tgtattttctTGGATAAGATGTAAAATTAACTTACGTGAAAACATAAGAA TTCGATTAAAGGCTGTCTTATCAGCTGTACCACAGCTGTACTTGTTCTCG ACTTTACAATTTCGACTTTGAAACCTTTAAAGAAACTGACTGGCAGTTAT AACTTTACACGTACAATatacccctgtttcacagccccggtggaaattCT TCTCACAGTGGgactaaaaatttctattttactttatatccatacatggg gctgacgaacatttccagggccAGGGGTAACCCAAGAAGAATTTTCAGGA GGGCTGAAggagtgttttttcatttttccaagggctaaatagttatttta aaatttccagggggtgaaagactgattttagttagTCTACGCACTTCAAG TATGCcaataatttttccaaggtttttttgtttgtaaacTTGGCCATTTT CCAGGACGTATCCACATATTTTCGAtattctttttgcttggaaaaggttc gtccacccccctgtatcaATTTTTAATGGAATAGCCAATTAGAGCATTTT TACAACCGAGGAcgaaattttagccaatttttcatTGGGTTGGAGTccaa ccgggtctgtgacacaggtgTGTTCTACATGGTGCATAACAAAATCATAA TTAATTTGGTGATCTGAGGTAAACTAACTGCTTTGAAACCTCAAAAGCAT TTCTACACAATGGCAACTTCTTGGCAACTTACAAATCATTGCACACCGCT ATGCAAACGtcaaaattattacttttaacatttgaccgaaatgttcaatc ccacaatactttccatcttgattcgtaatgcgtgcacattattacttttg tattgtcaataagtgtaattgacttgcaaaagcaattaatgcaaaggatg atgggattaaaactcggacaagcagtaattttgatgtctatttttagaat cactgCGGTATGCTATGCCGAACCCTTACTACGTCACCACGCCATCGCgc aaaaaagtgttttgatcACATCACGCCGAAAATATTCTCTTATCAACCTC ATTACACCGAGATTTTTTGGTAATCATGGATCACGCCACCACGCCTTTGA CTTAATGCatgtatttcattttttcattctaGTTGGAGTGTGTGGTTTCA TTTTATTACACGCCAGTCAAGTTCAACCCAAGAATACAAGCTCTGTTATT ATTGCCAACCTTCTCAGCTTAGGTAAGTTCGTCCATTGCATTAGCAACCA AAACTCCCTCCTTTTATCGTCTGCTCAAATAACGATTACAGCTTTTAAAA AGTCTACAGAACTTTTGTCTAGGATTAAGGGTAAGATAACTTTAATTGAC TGCACATGCAATAACACAAtggatttaaatatttttacccATAGGGggta ccattgagtttcaagcccgaagggctagaggtcaatctctaacctttctc aagtaagaaaaattgaatccttaaaatatgcgccgtatttttgatgacgg attgaatctagcaattcctttattttcgagtgatatatttttcaaagtta agcggtaaattttagtttcaatctgtcatttgtgtaaaaaccaggcgggt cgctcaaggccgcgcaactttggtaggatttgttggcttcaaatcctacc aaagagattgacttctagcccttcgggctttaactTCAttgggggtacta cccttgccgaccaaCGGGGTgtgtagtctgaatcgcagacctctacaaaa ccccagaatctagcaattcctttgttttcgagtgatatatttttcaaagt taagcggtaaattttagtttcaatctgtcatttgtgtaaaaaccaggcgg gtcgctcaaggccgcgcaactttggtaggattttttggcttcaaatccta ccaaagagattgacttctagcccttcgggctttaactTCAttgggggtac tacccttgccgaccaaCGGGGTgtgtagtctgaatcgcagacctctacaa aaccccaggtagtaaaGCGAGCACGAATCCGTTTGTGGATGCTAGCAGCC TACGGGGTGTGCCGCTAGAGTTATAAAAATGGGTCCTTCCTTGGACtcgc tttttttttttaagtgactCTAATgagaatgggactgaaattccaaaatg ttctcaaagttttccttatttttccaaaattcccctaaaaaggtacccta cgagggactgatttttctattttggtgtttttgtgaccctacgtgggact cgtggaggttaaaagaTACCCTTACCAGCGTCACATCCCCGTGGCCTTTC CTCAGGTATTTTCAATCTTGAAATTTCCCCCTGTTCCGTTTCAGCGGTTG GAACAATCATTTACTGGGCAATCGGCNCACATCCCCGTGGCCTTTCCTCA GGTATTTTCAATCTTGAAATTTCCCCCTGTTCCGTTTCAGCGGTTGGAAC GATCATTTACTGGGCAATCGGCTTCGCTTTCGCTTTTGGAGATGGTACGA TAAAAAACAGCAACTTCTTCTTATCCTATGATCGATTCTTCTTAATTGAT GCAAGCGATGATGATTATGCGCGGTTTGGAAGCGAACTGGTCTACCTGAT GTTGGTGCTGGTGTTATGTAACAGTGGATTTGTTTCCCGCATGCGCTATT GGGTTTATCCGTTGTTGACACTCTTTATTTCTGGTAAGCTCATATCTTTA TTTCTGTTCGTTTCTGTCTGTGTTTTCTGTTTGTCAATCTGTAATacttt aaaaagaaaagcgGTGAAGAAAtgtagtaagtaagtttgcggcCGCAGTC TAAGACGCTCCGAAGCTCACTCAAAGGTCGGGGAgagcgccactctttct ccctggattgtttCAAATGGGCAATATTCATACAGAGGGATGGACAAACA TTCCCAGAGGGCAATCggaaaaaatttccaaggggcgtttttcattttcc caagGGCTTAAAAGGttgttctaaaatttccaggggtaaaagactgattt tagttcgtccacatTCACTTTAAGGTACAAAAAGAGTATTTCCAAGGATA CTTTTTCTAAATAGATGGTATCTATAcatattgaatttttctttgTGACT AACAAAGGCTCGTCCAACTTTATGGTTTtcttaatggaacagcccaattg CTGAGAGTCAAACAGAGGGGCATTATACCGGGGATTAAACCCACCACCTT GTGCACCGTAGCCGAAAATGCTCTACCTTTGCACTGCGGTTGCATAATGA AGTGGTAGATTTTCATTAAGGCAAAAacttgaaattgaattttttgtatt attttcaCAAGGTGTTATATATCCTTTTGTGATCCACTGGACAAAACATC CGGAAGGCTGGTTGAAATCTGGTATCGAAGTAGAAATAGATGGAAAGGAC AAAATATTAAGTTATCAGGTATGTAAGCCCTTTTGTTTTAGCACAATAGT CTTGTCAAAACCCTCGGAACATGCAAGAAATTAGATGAAAATCAGGCCAC GCGAATATTCAAGATGCTCCAAGAGAATACGTGTTTCCTAATGATCAATA ATGACCGCATtccaaaagagaaaaaatggcAAATAGTGTGATTTTCCTAA AAACCTGATAGACCAACAAAGTGATAAAAAATCGCGCAGAGGGAAaattt agaccatgttcgcacgtgacggttccgtttcgctccgaaacggaatgaaa ccattctattggttagaagtgacgtaacacttgaatgtaaccaatagaat gacttCATTCTAGACTAACTCTGCCATACTCATTTTCAGGATGACGGGGG AGCGGCGTGGATTCACGTGCTCAGTGGTAGTGTCAGTTTGATCGGAACAA TTTTGTTGGCGCCACGAAAAGATCGACAGGGAAAGAAATTTCGTCCAGTT GGTGGAAACTTGACCCCCGTAAGTCAAAATTTGATTCTGTTAGTCACATT AAATTGGTCTTGAACTCATGTCACTGATCTAAATGGTTTTATGAGGAGTT TCACCACCAATGGATTTCATCCTCtcattttcaaatcaattaatCATAAG CTTTAAGGTATTGCTCTTGATAACGATGACCTGTCTTAGGAGATTATTCC CTGGAACAAAAAGAAGTCCATGGCTGATAAATAAAATACAACTTCTTGTG CccttacacttttttataataactCCAATTTTCACCACCGCTAATATTAT ACCATGCTTGCTTATTGGGTCAAAGGCTCAATGTCTGCCATGGACAGATT TATCGTTTGCCATGGATAGATTATCTATTTCTTTTCAAGATGGTAAAAAA ATCAGTTGATTAGAGCTCTGGAGCCTTCGCAACCTAGTTGCTTACATGTG TAATAGAGAATAAAGACATGTATTAAAAAAGTCATTCTAGAAAATATTTC TCTATCTATTTTCAGTTGATGCTAGTAGGATATTTCCTGGCTGTCATCGG TTTGCTAGCCAAACAACAGACAGGTAAAAGACACTTAGCCAACAGCCTTC TGGCGGCTGAAGGTGCCGCTTCGGTATCGTTCGCTTTGAAAAGGACTGGA TATTTTGGTGATCGATCATCGACTAAAGCTCTCATCAACGGAAGCATCTC TGGTTtggtgagtttttttttaatatgggGGAACTTGCAAACTTCCTTTA GTTCTCTTTTTATAGTTCTAATAGCACTCACGGttgtatcacgtccatca gtaaaatcaaaaagtgctTCAAgcggctctgggtacgagatttgGACACT TGCTTCTCATGGCTCTTTTATACCCTTCCCTTCCGTGCAAAAGACTTTGT ACATAAATCAACCCGCAACCTAAGTTCTAGTAAAAAATGGAAAGTCAAAT TTCTTAAACAACCACATCTGTTTGCTCAGATTCTGATGCTGAACTAAACG TACGGATGAGAGCAGAACTCTTGGACACGATTAATCTTCATACCTCTCTT TTAGGTGGCGATTTCAGTGCTTTCAAACGATTACCTAGCGTACAGTGCAT TCGTCGTGGGAGTGATAGGTGGTCTCGCCTTCACTGTATGGAGCGCGCTT TTACAATTATGTCGAATTGACGATCCAACTGACTCTGCAGCAGGTTGGTT CTGAAACACTTTTTGAAGATTGTGAGATCTTACTAAACACCTTCAcagtc tcacagccccggtggaactttttccttagtggggataaaaattcctattc aaatcccaatggggatagaaattccattGTTTCATGATTAAAAAATCcat tgggatggttttggagtacaatttttaaacattgaatttcgaatggtgat tgaatcaaagtcaattgcccagcgaggctgaaattctagggtattatTTT CCCACCGAGGAcgaaattttcgccaaattttccattggggctggggtccc agcgggtctgtggcACAGGTGTGTTGCTAAAGAGGAGACTGTGCTCGAAA TACAGCCTAGTCTTCATAACTCATAACTCTTTCACTCCTAATACGTATCC TTAGATTGAACAAATATTCAGGTCCCCTTCATCTAACTCACCCTTATTAT AGACAAGTCTCTAGAACTTGGAGGCTcaataacttgaaaaaatgtCCCTG TCCTGAGCTTGAGTGTTAATGGAGACTCTATGTAATATCGGTTCTAGTCT TATAGAAGAAATAACTTATTTCTTTCAACATCCAATTTCAGTTCACCTTG GTGCCGGCTTTTGGGCAGCCATCGCAAGTCCATTGTTTCGAAAAACCGGG GGTATCATTTATGATGTTAGCAAATACAATTTGCAGATGTTTGGTTGGCA CTTGTTGGCAGCGGTAGCCATCTTTGTGTGGAGTGGTCTGACTGTCTTCT TGGTACTCATATTCTTCGTGTTCGCAAGATCCATTAAATACAGTGGCCGA GAAGGTatgtcttttattttttattctatatATTCATTAAGCAATGTTTT CTATGGAAGCACCTAAAAAAGACCGGCTGTTTCACActaattttgattta aacaaCGTCAAAACTATTTCGGGTGCTCCTCTATAAAACATTAGTTTAGG TATAACTCTTTCTAAAGCGTTTaataattttgatatttatgATATTCAAT ACATTATGTTTTCTACGGTTTTCCCCGGTTTTGGCCGGTGGTGgcaaatt tttaaacaattttcctctagcttaaatttgccactactggaaAATAAACA AGGGTGtttccatagaaaacattacatcgtgaatattttgaattcatACG TCGATAAGTATACCAGTCTCAGAATCAAAAGCGCAGGTAAGAAAGTCATT TCTAATTTTGTTGACTCTTTCAACAGTGAACCACAATAACTATTACAGCT CATTGCTTATGAATTTcacgaattttattttaaaaacccTTAGCTGCAGA AATTGGTCTCGATCAATTGGAACACAAAGAACCAGCATATCCGGACCGCG AGCAATACACACCGGACAGAACTGACCAAATCTTGGACGATCTTTTCTTA AAAGATACCGGAATGTATGCATACGATAATCGGGCTTCACAAAACAGCGG AGCTTTCGATAACCGGGAATCAAGAAGAGATGGGAATGAACAATTTGCAA AATATTGAACACGATCTTcgttttggtttttgtttggaaaagaaaatcga aaatcgaaaaaacgACACATTTTTTAATGCAGAAATATTAAACATCTGTA GAAAGTTAAACAATAGCGAGGTTAAATAAATCGGTATAATCACGTCAACG GACAAAATAATATGTAGCAGGTTTGTGAGTTCcaaccaatcaaattctgt ATTTTAACTAGCCTATTACTATTTTCGTCCGTCTTCGTGATTAACCTCGC TAAGTCCTGATTAACGATTTGGACAGTTATCTGTAAAACAGGTGATAGAC ATCTTTAAGAGGAGGATGATAGCAATATTTTAGATAGTGAATTAATGTAT TTGGCGATGACAGCTATTGGAGGATGTGTTTAgatc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034240XLOC_034240Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054292-exon-scaffold_242-1491911889:1736696..1736943TCONS_00054292-exon-scaffold_242-1491911889:1736696..1736943Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1736696..1736943TCONS_00054292-exon-scaffold_242-1510915933:1736696..1736943Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1736696..1736943TCONS_00054292-exon-scaffold_242-1575043694:1736696..1736943Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1750078..1750167TCONS_00054292-exon-scaffold_242-1491911889:1750078..1750167Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1750078..1750167TCONS_00054292-exon-scaffold_242-1510915933:1750078..1750167Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1750078..1750167TCONS_00054292-exon-scaffold_242-1575043694:1750078..1750167Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1751386..1751628TCONS_00054292-exon-scaffold_242-1491911889:1751386..1751628Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1751386..1751628TCONS_00054292-exon-scaffold_242-1510915933:1751386..1751628Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1751386..1751628TCONS_00054292-exon-scaffold_242-1575043694:1751386..1751628Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1752257..1752363TCONS_00054292-exon-scaffold_242-1491911889:1752257..1752363Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1752257..1752363TCONS_00054292-exon-scaffold_242-1510915933:1752257..1752363Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1752257..1752363TCONS_00054292-exon-scaffold_242-1575043694:1752257..1752363Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1752735..1752863TCONS_00054292-exon-scaffold_242-1491911889:1752735..1752863Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1752735..1752863TCONS_00054292-exon-scaffold_242-1510915933:1752735..1752863Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1752735..1752863TCONS_00054292-exon-scaffold_242-1575043694:1752735..1752863Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1753361..1753552TCONS_00054292-exon-scaffold_242-1491911889:1753361..1753552Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1753361..1753552TCONS_00054292-exon-scaffold_242-1510915933:1753361..1753552Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1753361..1753552TCONS_00054292-exon-scaffold_242-1575043694:1753361..1753552Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1753900..1754038TCONS_00054292-exon-scaffold_242-1491911889:1753900..1754038Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1753900..1754038TCONS_00054292-exon-scaffold_242-1510915933:1753900..1754038Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1753900..1754038TCONS_00054292-exon-scaffold_242-1575043694:1753900..1754038Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1754637..1754849TCONS_00054292-exon-scaffold_242-1491911889:1754637..1754849Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1754637..1754849TCONS_00054292-exon-scaffold_242-1510915933:1754637..1754849Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1754637..1754849TCONS_00054292-exon-scaffold_242-1575043694:1754637..1754849Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1491911889:1755339..1755931TCONS_00054292-exon-scaffold_242-1491911889:1755339..1755931Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1510915933:1755339..1755931TCONS_00054292-exon-scaffold_242-1510915933:1755339..1755931Clytia hemisphaericaexon
TCONS_00054292-exon-scaffold_242-1575043694:1755339..1755931TCONS_00054292-exon-scaffold_242-1575043694:1755339..1755931Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1736696..1755931 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.4576 19.3751 11.6722 0.0324285 20.3962 15.2136 13.0183 14.5976 13.0383 16.7052 12.0115 11.0241 3.70899 1.62887 1.84485 4.37552 6.16654 12.2453 1.89446 1.02579 19.3429 17.4782 28.448 18.711 20.5383 19.9011 2.87213 1.57071 15.9018 16.5811
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054292 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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