TCONS_00054773 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00054773
Unique Name	TCONS_00054773
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2471

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_245:285974..295368+

transcript sequence

>TCONS_00054773 ID=TCONS_00054773|Name=TCONS_00054773|organism=Clytia hemisphaerica|type=transcript|length=2471bp
CGATAAACGAAAAAGTGTTCTTGGGCCACAATGGGTCAAACACTACTGTT
CATAtaccaaagaaaacaaaattctcACAATGGTACCTTACACGCAAACA
AATACAAAACTTAATGCAAACACTGATACAATCATCGTTACATCATGTAC
CCGGAGGCCAACAGAATCTTCAGAACGAAGATTTTTATTTGACATCACTG
GACAAGATCGCAGTCAACCATTAACTATGCAATGTTTGTCTGAAGATGAT
CGCAAACTATGGTTGGAAGTTATGGAAGGAAAAGAACCGATTTACATGGA
ATCAAATGAACTCAAACAAAATGATGGTGTTACAAACTTGGATCAAACAG
GTCTTCAATTCATCTTGAAATGTATGGAAGGCATTGAACGCCGagGTTTA
ACAGACCAAGGAATTTACAGGATAGCTGGAGTCTCATCTAAATTCAACAA
ATTACTAAATACTGGAATagATCCCAAACAAATTGACAGGTTGGATTTAA
CCACAGACGAAAGTCCATGGGAAGTAAAGACAATAACAAGTGCAatgaag
caatattttagGAACCTATCAGAACCTGTTTTTACATTCAAACTACACGA
TGACTTTCTAAGCACATTAAAACTTGAAACAGCGGAAAAGAAAGTTGCAA
AACTAAAAGAACTTGTCAATCAACTACCTAATGACAGAGGCAATGTTCTG
AATAGGCTGATGTATCACTTGAAATTggtTGCAGGTCAAAGTAAACAAAA
TCTCATGCAAGAAAGTAATTTGGGAGTTGTGTTAGGCCCAACTCTAATGC
GCTCTAGGGAAGAAACAATGGCTGCCATTATGAGTATTAAATTTCAGAGT
ATTGTGATCGAAACGATGATCAAAGAGTATGATCAGattttcACAGATGG
ACCTCCTCAATCTTTATTGTCTTCAATCAGCAGtaacaataacaataaca
cGGCAGCTCCTTTAAATGTGCCTGCAAATCCTATTGCTCCAAGAAGTCCT
GGTCGAAATTCCAAGAAGCGTGCGCCAGAACCGCCCACAGCAGCAACAAA
ACCAGTTGTGAAGTCGAGAAGTGAAGGTGAACCTGTGGGAGGCAAACCTC
CACCACCAGAACGACCACAACCATATGCTGCTGGAAGGCCTGatcaaaaa
gaaatattaaagaAGCAACACTCTACACCTGCTAATAATCCTATCAAACC
AAAATATCCTCCTCCAGGTCGCCCTCCAAACTTGGGTGGTAGTCTAAAGA
GATGGCCACATCTTGCAGCCAGACCTTCACCCAATGGTAAACCACTAATC
CCTCTTAACGGAGACGATAAAATACGGCTTGCAGAAACTGTCACTCCATT
CACGTCACCCCCTGAAGACGACAGTGAAGCAAAGAGTCGTCGCAACAGTT
ATGCAAAAGCTATGGATAAAATCGTGAAATCAGTAGATGTTGCTGAAAGT
GGTGGCGCTCCACCATTGAAAAGTCCTCCTCCGATTTCACAGAAACCCAA
ACTACAAAGTATCCAACAATCTTCTGCACCTTTTGCTAACAATCAAATCC
CTCCAAAACCTGGTGTCCCTCCTCCCCAAGTGCCAAAGAGAAAAGAATGg
aAAGTGAGAGCGTTATATGATTGTATCGCAGAAAACACTTCAGAACTTTC
TTTCAACAAGGGTGCTATCATTACAAATGttAAAAGTTCAACCGAAGAGG
GCTGGCTGATCGGAACATTAAATGGTCGCTCAGGATTCGTGCCTGAAAAC
TATTGTGAAAAGTTTGAAGACTAACATAGAGCTTTATAATATATTAATGT
AATGATGTAACATAGGAAGTTTTATGACATATATTCTTTATTTTACCCCC
TCTttaattattattgttattatagTAGTACAGATATTATTGTTATGATC
TAGAATAATTTTTAACTTCTTTGCAAATACTGTGTGAATCTGTTAGATTT
GCAAGTCTATCAAGGAAGAAGGCTTTAAAAAGCTTACAATTTAATATTAT
AACACTTtcgtcaaaaatttgaaatttttatctttcCTGGTAGTAATATT
TAGATTTAGtagaatgttttaaatttcaatccattttaaaagaatttttt
gggtgaaactttttgtaattttattatTGTAATGTCGAATAAactattaa
tttttgttttcacatCACCACTGTAATTAGCTACACTTATTACTTCAAAT
TGCATTATATTATTATGTTGTTGTTTTGTCGTTTTGAcaatttatttctt
tattttttgttgtgtggtttgaattttgatttttgttcgtttttttttca
ggattttatcttttaccaacagagaaattatttttgtattgttttttttg
ttcttttattattttattagaaTAGACCATATTGTTATCTTTATCAGAAA
TAGAAAGAGATTTTAAACAGTTGATTTACCTCCAATACCCCAAACTTCCC
CCAAAACATGAAATTGCCCTC

Run BLAST on NCBI

transcript from alignment at scaffold_245:285974..295368+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00054773 ID=TCONS_00054773|Name=TCONS_00054773|organism=Clytia hemisphaerica|type=transcript|length=9395bp|location=Sequence derived from alignment at scaffold_245:285974..295368+ (Clytia hemisphaerica)
CGATAAACGAAAAAGTATGTATTATTttgtctgaaaatattttgaagtgg
gaatttccccaaataataAAACCCGACCTTCCctaaactaatgaagcaat
ttcacacgtcgaaaattttgctgtaaatcATCTTAATCTTTTACATTGTA
CCCTAGACCTAATATTGCAAATACATCAAGATTTGTTTGACGATTCTTCA
TTAATATTCAGTAATTCAATAAGAATAGTCCTATCAACAAGTCTAAAAAA
GGTGATCTTCAGGTTTCATAAAACAACAAGTAGCAGAACCGTGTCTGAAT
GATAATTATACATTATATTTATATCTCAACAAAAAATCCTATTTCTGTTA
GGTGTTCTTGGGCCACAATGGGTCAAACACTACTGTTCATAtaccaaaga
aaacaaaattctcACAATGGTACCTTACACGCAAACAAATACAAAACTTG
TGAGTATTTACAAAACATTTAGTGGCACACAAACAGCTCAAGTTGTTGCA
GTAAAAGGCATAAAGTGCACTTCTTAAGAATTTAATGTTAAAACTACTAA
CAGTATGATATTGTATACTGTAAATTTTACAGTGCCTTGTTTTAAAACTA
GGTTTTCATATACTATCCTCTTCTACTAGCCGATGTTAACTTATATGATA
AATATAATGAAttgatatattttcttttattgCTTTTAACTATCTCTTCT
AATAATTTAGAATGCAAACACTGATACAATCATCGTTACATCATGTACCC
GGTAAGTTTTCACATAAATCACAATTGATATGATTATCCTatcgggtgcg
ccacaaaaaagtttctctctttgaaactgattttctcgaaatctaaaaat
gtttaaagaaccattcctattccattgagaagaagaaagataaacttaaa
ttttaatgggtcatttattaaattcggttcattagatcaaaagttatgct
caattgaataaaaaagttactttcagaaagtgcccgaaaacgttaaaaat
cgattCACATAAATCTTCACATTTTTTTCCCCATTCAGGAGGCCAACAGA
ATCTTCAGAACGAAGATTTTTATTTGACATCACTGGACAAGATCGCAGTC
AACCATTAACTATGCAATGTTTGTCTGAAGATGATCGCAAACTATGGTTG
GAAGTTATGGAAGGAAAAGAACCGGTAATTAAAAGCATTGTGCATATAAC
TCATTATGTGAACATCACTAATTAGATTGTACAATATGAAAATAAGATAA
TAATCATCAGTGGAGTGATTAATTTTTGCCTCGGTTTATTATAGATTTAC
ATGGAATCAAATGAACTCAAACAAAATGATGGTATTACTTTATTTCAATC
ATCCATTTTTATCTGAGGTGTAGTTCTATTGTTCTGAAATCCTCCTTTAC
AGGTGATCGGGGTTCGCACTTGAAATGTATGTTAGACATTATATCCGGTG
TGGTGACATATGAATAAAGACTTGCGAGAGCAAACTTTCGCTCTCGCTTG
CTTAAGTAATGTTGCCCCATGACTCTGTCGACTCACAACGACACAAGCAC
AAGATACATGATGACTGATCAGTGCAAATATAGAAGATTATAGAATAGAC
AGGATCACCCTTCCTTCTTCAtttgtattcaatttttcactttcaaaatc
TCATTCTTATAACGTTCTAATATGTTTTGTTTGTATTAAAATTTTAAGGT
GTTACAAACTTGGATCAAACAGGTCTTCAATTCATCTTGAAATGTATGGA
AGGCATTGAACGCCGaggtaaaaattttctttaattgaTTTAGGGTATGt
gagacacaaaattttgattaaattcTTGGTTTTTTGTTGTTAGTGATTTT
CACATTAATaatgtgaaagttttaaagattttgtaaacttcaaattaaaa
aaagaaaggcTAAACTTTAAAATACCCATGATAGTTTTTCATATTATGTG
TTCTTTAATGTATGTTTTTTTACAGGTTTAACAGACCAAGGAATTTACAG
GATAGCTGGAGTCTCATCTAAATTCAACAAATTACTAAATACTGGAATag
gtatttgaattttttacctATTTGATGTGACTAGGATGTGAGGGGATCGA
TTTCATTCAATTGTGGTTATCAtctgcaaaattaagttccaATGGAATTT
GAAACTTAGctcaggctgcatcatttgaggcgtgcgatagcacgcgcaca
cctccacacacacctaaaatgtctgaggagtgcgatcaatcacaccccat
aaagtaagtttcacaactgaaagttgtgcatagcactccttatcacacgc
ctaagttactaaaatttagattttaggagtgtgattgaccacacgcctga
aattttcaaatgatgcagcctgacTTAGCTCTTGtcaaaatacaattttc
ctttcaaaatctACGGCTTTTCTGTAATTCGTTTTTGAACTCATTTTTAG
ATCCCAAACAAATTGACAGGTTGGATTTAACCACAGACGAAAGTCCATGG
GAAGTAAAGACAATAACAAGTGCAatgaagcaatattttaggtaaaaatt
cattcaaatttaTTGTGATTGTCTTTTATTTAAGTGTTCGTCATTGGTGA
CTattgcaatatattttaactCTTTCctcttcaaatctttttttctagGA
ACCTATCAGAACCTGTTTTTACATTCAAACTACACGATGACTTTCTAAGC
ACATTAAGTAAGTTATGTTTTCTCCATGTATCATACGAGAAACGTTTTAC
TCAAATGCTAGGAGATTAAATTCTTCTGTTTTCTTATCTTACTCTTTACT
GTTTGTTATCCAATATTCATTTTTAGAACTTGAAACAGCGGAAAAGAAAG
TTGCAAAACTAAAAGAACTTGTCAATCAACTACCTAATGACAGAGGCAAT
GTTCTGAATAGGCTGATGTATCACTTGAAATTGTAAGAATTACTTTTtgt
tgaatgtatttttgtatAGCTTTTttttggaggtcctataaattaacccg
tgttcgttcgttcgttcgttcgtccgttcgttactagcttttctcgggat
tggctcaatagtttttcctaatttttggcacaaagatgcaaaatggtaat
gcccaaaatgtgacggagcccgattttcgaaaaaaattcatttccggccg
aagatgccggaaatatgccggaaaaaccggttttttggcattttctcgag
atttcatcattagttttttctgattttttgcacaaagatgcNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgatttttga
agccggaactttctaaaaattgccggaacagccgattttcgccggaaaaa
tggtatttcttgaatttctcgagctgtactttatatttttttatgaaatt
ttgcacactgatgtaaaatgacaatacctaaaaagtgatggagcccgatt
ttcgaaaaacatttttttccggccgaaattgccggaaatatgcctgaaaa
actggttttggccgtttttgcagattttcgttagattttttccttgtatt
tctatgtttttcacacaaaacgTTATccataacaatgctcaccatcaagc
atgattcaattgtcaataaaactgatttttgcgaccagaactttctattt
attttttccctacaacccttccctctccccccatcaacaatcaatgatga
atttattgcgttatgcattttcgctaaacgctatattttctgactgattt
ttttctcctcgcagtgttatctaactttcatcatcaggtaggtccattca
gcatctagcttgtttagtACTAGTCTGAttaaattttttaacctttctaa
ttttattttcagggtTGCAGGTCAAAGTAAACAAAATCTCATGCAAGAAA
GTAATTTGGGAGTTGTGTTAGGCCCAACTCTAATGCGCTCTAGGGAAGAA
ACAATGGCTGCCATTATGAGTATTAAATTTCAGAGTATTGTGATCGAAAC
GATGATCAAAGAGTATGATCAGGTATTGATATCATAAcagaattctcaat
atattttatccAGGTCTGACTTCATTCATCTTTTTTTATGTTGTCAAGGG
GAGTCAAATACAGTACACAAATATGATAACTTCAActtttgataacttta
ttaTAGCTGTAATGTTAGATGTTTTATGTCTtatttttcatagattttcA
CAGATGGACCTCCTCAATCTTTATTGTCTTCAATCAGCAGtaacaataac
aataacacGGCAGCTCCTTTAAATGTGCCTGCAAATCCTATTGCTCCAAG
AAGTCCTGGTCGAAATTCCAAGAAGCGTGCGCCAGAACCGCCCACAGCAG
CAACAAAACCAGTTGTGAAGTCGAGAAGTGGTAAGCCTAAGAATAGAACT
AAGAGGGTTGTTATCATCAAAGACTTGGAAGTAAAACGTGATTCATATAA
ACtaataaacaaataaatttgACTGTGGACTGGCTGAATCTCAGAGTTTC
GGAAAAGTTAAAAGTTTCTCTATTCATTCGACTAATAACTAAATAGTTTT
AGTACCAGACTAGTATCTAACTTTATCTTTTTATAACAGAAAATTTATAG
TTCTCTTTATgaatcgaaacaaaaaggtttcaACTAAGACGTTTTTTAAA
GCTTTGATTATGTCTTGTAGATAACTTATTGTATTCAGCTTTGTAGATAT
TTTAGAAAAACTGTGAAGAGATTTTTTAGCATGTCAttgattgaaataaa
ttttttcctcAGTCATGTATGTCTAGGGTATTTTCATGAAATAGAAGATT
GATAGCTTTTAAATATGAAGAAGATTTGACAAAAGGTTGCACTCATTGAA
AGTCATTCCAGGTAAGATTAGAAGATTATGTATTTTAGAGTTTCATTTTA
AATCCTTAAAATTCAACTAACACCTCCTGCATTTTGTactttatattata
ttatattgtaTTCATTCTTCTGTTTCCTTCTATGCGTTTAAATCGCCGGT
ACTTCTTTAACCTTCTGTTTTTTTATAGAAGGTGAACCTGTGGGAGGCAA
ACCTCCACCACCAGAACGACCACAACCATATGCTGCTGGAAGGCCTGGTA
AGATCTCTTCAGATGGTAAGACCTCATTGATTCTTTATAATTTGTCTTGA
TGGATGGGATAGCAATATGGGAGTTGAAGGGAATTGGAACAAGTACTATT
GAGAAACCAGAGAAATTAATATCTATGACTCTTTATTGAACTAATTCATT
GATTAATGAACTAATCTCTCATCAAACTTACTAATGATATTTTAgatcaa
aaagaaatattaaagaAGCAACACTCTACACCTGCTAATAATCCTATCAA
ACCAAAATATCCTCCTCCAGGTTTGCAATCCAAACTAATCTTTCATTTAA
TCCTGAGACTAATACTTCAGTTGACTAATAATACTTATCAGAATCCAGTC
TATACTTATGAANTCCAAACTAATCTTTTATTTAATACTTACTTCAAAAC
TAATACCTGACTAATAAGACCTATCAGAATCCAGTCTATACTTATGAAAT
CTCACTCCTTTGTACAACAACAGTACTTTTACATCCTATTTTGAGATATC
TTTATTGCCTAGtgatttttggtaattttttttactcatTCCTTTCAGGT
CGCCCTCCAAACTTGGGTGGTAGGTAAGAAGGAGCTTTATATACTTAGGA
TTTGCTTATATACACCTCACTGAATGCTAACTTGCACTTGTGcgcttttc
caggaaaaaattaaatatggaaggtagaggatataacattttttggaaat
ttatcccccggacattgtgacttttgatccccggacaagcatcagttgac
ccccggacattcataattacccctaaacagagcagttttgcccccccccc
caaacaaggtaaattttgtagatttttcactaacccccggacaatatatt
cAATTTATCCTCCGATACCTCCCATGTACAATAATTTTCCGGAAGAGCCC
AATGCATGTACGATAAAACACAATCACAACACAAACActacaaaaatctt
tttggaaTGCCTTTCCAGCTCTTTTAACAAGCCTTGTATACTGAAAACCT
CTTTTAATGTACTTAATGTAATTATCGAGAGAAGATTATTGGTCTGCTAC
AAATAAATAGGCTTGTGTGAGCGGGAAAGGCATTCCACTCACACAAATGC
ACAAACAACACACCAAAACACAAAGCTCTTTTTGATTAACGAAGCTGACT
TGTGATAACGTGTTATTTAGTCTAAAGAGATGGCCACATCTTGCAGCCAG
ACCTTCACCCAATGGTAAACCACTAATCCCTCTTAACGGAGACGATAAAA
TACGGTACGACAACTACTTGTTCTGTTTGTGTTGAACTGTTCGTGTTATG
CACAAAATTGTTGCAAGGTTTAGCACATGCATGACATTTTTCCTGTTTGG
GTTTTTCCAACACACTCTCAGCTTTCATGCATGTGTCTGTACCTTACAAT
AATATTGAAGGACCGACAAAAAAACATATCCTATCATTACATCCAATAAA
ACTGACATTTAATTGTATAATCACTGACGGTGAAATGTGATGACCGTGAA
AATTGACTGTTGTATGCACCCACCTAACACATTTGCTCTGACTGTATATT
TTTCCTAAAACAGAAGCCTTTTTAATTAACAGTGCATATGgttcattttt
gataaaaactttgAATTAATTTAGCTTGAAACGCTTTTCGTTCAATAGGC
TTGCAGAAACTGTCACTCCATTCACGTCACCCCCTGAAGACGACAGGTTG
GTGGTTTGAGCTGTTTACCAGAgagtttgaattttaaaatctcTTCAAAA
ATTTCTCAATCTATTTACAGAGAGCTAATATTTGTATTTTCGCCTGATTA
ATCCAAACCTGATACTAAATTTTATAGTGCCTCATAAATACTGAATAGAT
CTAATAAAGGCAAATTTAGTTTTGGTGTAGGTCCAAACTATTTTCATAAA
GTTACTTTATCCTTTCTCACGTGTTTTTGGTAACATTTATATAATGCTTT
GTAACAAACTCGTTTATAGTGAAGCAAAGAGTCGTCGCAACAGTTATGCA
AAAGCTATGGATAAAATCGTGAAATCAGTAGATGTTGCTGAAAGTGGTGG
CGCTCCACCATTGAAAAGTCCTCCTCCGATTTCACAGAAACCCAAACTAC
AAAGTATCCAACAATCTTCTGCACCTTTTGCTAACAATCAAATCCCTCCA
AAACCTGGTGTCCCTCCTCCCCAAGTGCCAAAGAGAAAAGAATGGTATGA
CTGAAAGAACCAACCTGTTTATTTCGTATTTATTTTAGTCATTTTAAATC
TgtttgtaaaataaaaagttagttGCTAGATGTTCGGTAGTCTTTTCTCC
TTTAACTTTTCTTAATTTCTTCTcaggttttggtcaatttcccTCCTAAA
ATTGTTTTAACAAAAACAAGtgtatttgcaaaaaaaagttttgttttgat
tttcttctttttcaggaAAGTGAGAGCGTTATATGATTGTATCGCAGAAA
ACACTTCAGAACTTTCTTTCAACAAGGGTGCTATCATTACAAATGGTAAT
TCATTTCAAATCTAAGAGTGGGAATGTGTTCGGTTAGACACCATAGCTCT
GATACATCAGTTTATAAAACTCTTTCTTACTCTATTCTTATTTTCGTAAG
CACCTTCGATCTattagaccatgttcgcacgtgacggttccgaagccatt
ctattggttagaagtgacgtaacacttgaatgCAACCAATAGAATgattc
atttcgtttcggagcgaaacggaaccgtcacgtgcgaacatggtcttaga
ggtcacccacatagtacgtacgcaaaaatTCGCGTAATTTTTAACAAAAG
GGAGGGGGCCTTGTACGCAGTGAACAGAATAAATGACGTAATGAAAACAA
TGGACGTACGCATGTGTTAAATCCCCGTCTTCGCCTTCTCTGCGTATACC
TTCCATATTGATGGTTTCTTACACCAGCCTTCGGCTATGAGAATTGGTTC
TTGATTTTTTCGTTGGCTGTGTATTCACGGTGTATTTCAATACAACTGAC
TGTCTTGGTTTGTgatggtgtcaatttttttatattttgattttgttttt
tagttAAAAGTTCAACCGAAGAGGGCTGGCTGATCGGAACATTAAATGGT
CGCTCAGGATTCGTGCCTGAAAACTATTGTGAAAAGTTTGAAGACTAACA
TAGAGCTTTATAATATATTAATGTAATGATGTAACATAGGAAGTTTTATG
ACATATATTCTTTATTTTACCCCCTCTttaattattattgttattatagT
AGTACAGATATTATTGTTATGATCTAGAATAATTTTTAACTTCTTTGCAA
ATACTGTGTGAATCTGTTAGATTTGCAAGTCTATCAAGGAAGAAGGCTTT
AAAAAGCTTACAATTTAATATTATAACACTTtcgtcaaaaatttgaaatt
tttatctttcCTGGTAGTAATATTTAGATTTAGtagaatgttttaaattt
caatccattttaaaagaattttttgggtgaaactttttgtaattttatta
tTGTAATGTCGAATAAactattaatttttgttttcacatCACCACTGTAA
TTAGCTACACTTATTACTTCAAATTGCATTATATTATTATGTTGTTGTTT
TGTCGTTTTGAcaatttatttctttattttttgttgtgtggtttgaattt
tgatttttgttcgtttttttttcaggattttatcttttaccaacagagaa
attatttttgtattgttttttttgttcttttattattttattagaaTAGA
CCATATTGTTATCTTTATCAGAAATAGAAAGAGATTTTAAACAGTTGATT
TACCTCCAATACCCCAAACTTCCCCCAAAACATGAAATTGCCCTC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_034501	XLOC_034501	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_245	supercontig	scaffold_245:285974..295368 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0.00147925	0.0224907	0	0	0	0.0533396	7.64998e-09	0	0	0	0	0	0	0	0	0	0	0

Blast

[Close]

BLAST of TCONS_00054773 vs. Swiss-Prot (Human)
Match: RHG26 (Rho GTPase-activating protein 26 OS=Homo sapiens GN=ARHGAP26 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.476e-83
Identity = 137/296 (46.28%), Postives = 196/296 (66.22%), Query Frame = 2

Query:    5 KRKSVLGPQWVKHYCSYTKENKILTMVPYTQTNTKLNANTDTIIVTSCTRRPTESSERRFLFDITGQDRSQPLTMQCLSEDDRKLWLEVMEGKEPIYMESNELKQNDGVTNLDQTGLQFILKCMEGIERRGLTDQGIYRIAGVSSKFNKLLNTGIDPKQIDRLDLTTDESPWEVKTITSAMKQYFRNLSEPVFTFKLHDDFLSTLKLETAEKKVAKLKELVNQLPNDRGNVLNRLMYHLKLVAGQSKQNLMQESNLGVVLGPTLMRSREETMAAIMSIKFQSIVIETMIKEYDQIF 892
            + K   G  WVKHYC+Y +++K +TMVP+ Q +       +++I+ SCTRR T+S E+RF FD+   DR   +TMQ LSE+DR+LW+E M+G+EP+Y  SN+  Q++G   LD  G   I KC+  +E RG+ +QG+YRI GV+S+  KLL+  +DPK     + T   + WE+KTITSA+K Y R L  P+  ++    F+   KLE  E +V+++  LV++LP     +L  LM HL  VA   KQNLM  +NLGVV GPTL+R +EET+AAIM IKFQ+IVIE +I+ +++IF
Sbjct:  275 QEKRHFGTSWVKHYCTYQRDSKQITMVPFDQKSGGKGGEDESVILKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVY-NSNKDSQSEGTAQLDSIGFSIIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKTASETE-TDICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIF 568

The following BLAST results are available for this feature:

BLAST of TCONS_00054773 vs. Swiss-Prot (Human)

BLAST of TCONS_00054773 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RHG26	1.476e-83	46.28	Rho GTPase-activating protein 26 OS=Homo sapiens G...	[more]

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TCONS_00054773 (transcript) - C. hemisphaerica