TCONS_00055235 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055235
Unique NameTCONS_00055235
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2049

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055235 ID=TCONS_00055235|Name=TCONS_00055235|organism=Clytia hemisphaerica|type=transcript|length=2049bp
GGGGAATCCCTGATAGAAATAATTGCTATGTAGGAGACGAGAGAGAATGA
TAAAGCACATTCTCGACTGAAAACATGGCAGattgaagatttcaaaatac
TCAGTATTTTCCTAAAAGTTTTTCCAGTCTTCTTGCAtataaagaaagac
aaaatCAGCAATCATGTCAGTTAACTTAGGATAAGCTATAGACGTAAAAG
TAgaaaagaaaaatcacaaaaaaacatATTGGATAAgtcgaaaaaatcaa
acaaaaacagatTGGAGCAGCGGAGCCATGAGTGGAAGTGAGAAGCAGCC
AGCACCCTACACCAATGAAGAATATGACAAGCAGATTGCAGAGCTTGTGC
AAGTCAACGGTATATGGAAGAGGGATTACGAAGATCTACTtcatcaaaac
caaaaattaaaaGCAGCTCTCGGTATGAATCCACATTCGAGTCGATCAAC
TCGGTCTAACTCACCTAACCGTCACTTACAACAAACAAACACTGGACAAG
ACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTA
CAACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAACTCGGTC
TAACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAAGACCCAT
ACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTGCATGAA
ACTAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTC
ACCTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTACAGTTAG
CCAACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGAGTTATCA
ACTCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCACCGAGACC
ACACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCTTCACACT
CGATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGATAGTCAA
CACCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATATTCAATG
CGCTGTTGCGGATAtagagaaaatgaaagaacagATCAGATCATTCAAGG
AGCAATACGAGAGGGAGAGAGAAGAGAAAGAAAAGGAGAAATCGaagaac
aaaaatttgaaaaggaagTTGGCAGAAAATGAAGAAGTCACATTTCAATT
GCATCAAAGAATTGACATGTTggagaagaaaataaagaagatgGAAAGAA
CTGATAAAGTGGAACAACAAAGAAAGGCTGATCTTATGGGGCGAGGTGCT
TTCCCGAGAAACGAGCTTGGTTTCACTGGGTATAAAGACGAGAGGGATTC
CATGGCACCTAGAtatcaacaacaacagcaacaacaattGCATCAACATA
ATCGAAGGGAATTTGAAGGTGGAACTACTGAACTCAAACACCAAAAATTC
CGACAAATTTATCCCTTAATTTATTGAAACAGATTGAAATAATATTTCCA
CTGCTCTTATTTAAATTctcaaaagaatatttcaaccgATCAAGCATCTA
ATCTTATTGTATGTAACGTTGTTTAATATGCACACATTCTGAAAAATTTC
CGTAAATTTATTTTACCCTCTTTTGGGCGCGTTACAAGGGACTCCAGGGA
ATCAAGGCGGGGTCCTAATGCTTGCAATATTACGTAGTAAAAATAGTGCG
AGATCGTGGTTTTCTGcaaattatgcaaaattttttagatttgttaaaaa
atgtaaatcttACTGGAGCAGCTTATGACGTCACCAGGAAATATGGCAGA
TTTTTGGCAATTGGAACCATTAAGAAAAGGTCtaataaacaaaatttaaa
aaacaacacCATTTCTTTATCTACATATTTCACGATCTTTCAGATAAAAT
ActcgaaatttatttttgaaaacttcttgCAATGACCCCCAAATCGAATG
CGGGTTTTCTTGGTGGTTCTGGGACCAAAGGAACTCCTGTCAAGGCTAGA
ATCTTTTTTGAGCTAACTCTACTACCCTTCTTCACAACCAAACATGAAG
Run BLAST on NCBI

protein sequence of TCONS_00055235-protein

>TCONS_00055235-protein ID=TCONS_00055235-protein|Name=TCONS_00055235-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
MSGSEKQPAPYTNEEYDKQIAELVQVNGIWKRDYEDLLHQNQKLKAALGM
NPHSSRSTRSNSPNRHLQQTNTGQDPYSIRSTRSNSPHRHLQQTNTGQDP
YSIRSTRSNSPHRHLQQTNTGQDPYSIRSTRSNSPHRHLHETNTGQDPYS
IRSTRSNSPVRHSEASSLLQDLQLANTGPNPYVSPITTELSTPEDNSSYS
SLNLSPRPHRKQNAHSTPSYPPSHSILTPPTTYARSHSDSQHPNTGVNIG
QTEGYIQCAVADIEKMKEQIRSFKEQYEREREEKEKEKSKNKNLKRKLAE
NEEVTFQLHQRIDMLEKKIKKMERTDKVEQQRKADLMGRGAFPRNELGFT
GYKDERDSMAPRYQQQQQQQLHQHNRREFEGGTTELKHQKFRQIYPLIY
Run BLAST on NCBI

transcript from alignment at scaffold_251:592736..599491-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055235 ID=TCONS_00055235|Name=TCONS_00055235|organism=Clytia hemisphaerica|type=transcript|length=6756bp|location=Sequence derived from alignment at scaffold_251:592736..599491- (Clytia hemisphaerica)
GGGGAATCCCTGATAGAAATAATTGCTATGTAGGAGACGAGAGAGAATGA TAAAGCACATTCTCGACTGAAAACATGGCAGATTGAAGATTTCAAAATAC TCAGTATTTTCCTAAAAGTTTTTCCAGTCTTCTTGCATATAAAGAAAGAC AAAATCAGCAATCATGTCAGTTAACTTAGGATAAGCTATAGACGTAAAAG TAGAAAAGAAAAATCACAAAAAAACATATTGGATAAGTCGAAAAAATCAA ACAAAAACAGATTGGAGCAGCGGAGCCATGAGTGGAAGTGAGAAGCAGCC AGCACCCTACACCAATGAAGAATATGACAAGCAGATTGCAGAGGTACAGT ATAGTATGTTCCCAGCTTGTACACATCGTTGTTGTTTCGACGTTCATCTA ATAAAGTTCATCTAACGTTAGACAAGCGTTGAAATTTAGACTGGCATGCC AGTCGGTCTGGAGCGGTATCACGCAGGAAAAGTGAGCGTAGGAAGAAGTT TTTTCGGCGGCAAGAGCTGAAAGCAGCAGCCTCTCACCAACCTTTGCTAG TTCTCCTACACAGCTCCTATTCTAGCAAACGCCCGCCGCCTTTATGTTCC CGCCCTTTGACATGATTAATCAACAGACTAGTTTAGTAGTCTAGTTGAAA TTAAGTCATGTGTCAATCAGGCTCAAAAACGTTTTGACGTTTTTTTCCGT TTTCTTAGGCAAAGCGTTACTATAGGAACGGCATATAATCGGATTTTTGA ATATCTCAAATTACGCTAAATGGCTCTTGAAATGTAACGATCAATTTTCA TAATAAAGATACATATACCTTTCTCTTATAATCAGCTTGTGCAAGTCAAC GGTATATGGAAGAGGGATTACGAAGATCTACTTCATCAAAACCAAAAATT AAAAGCAGCTCTCGGTATGAATCCACATTCGAGTCGATCAACTCGGTCTA ACTCACCTAACCGTCACTTACAACAAACAAACACTGGACAAGACCCATAC TCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTACAACAAAC AAACACTGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTCAC CTCACCGTCACTTACAACAAACAAACACTGGACAAGACCCATACTCAATT CGATCAACTCGGTCTAACTCACCTCACCGTCACTTGCATGAAACTAACAC CGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTGTCA GACATTCAGAAGCGAGTAGTTTGTTACAAGACCTACAGTTAGCCAACACA GGACCAAATCCGTATGTTTCACCAATAACAACAGAGTTATCAACTCCAGA AGATAACTCCTCTTATTCTTCACTTAATCTTTCACCGAGACCACACAGAA AACAAAACGCCCATTCGACGCCTTCCTACCCGCCTTCACACTCGATTCTT ACGCCACCGACAACATACGCCAGATCACACAGCGATAGTCAACACCCAAA CACGGGTGTCAACATTGGACAAACAGAAGGGTATATTCAATGCGCTGTTG CGGATATAGAGAAAATGAAAGAACAGGTAATTCTCTTCTTATTTTTAATA CGCAATGTTATTTCAACATACATCTAAAGTTTATTGTTTTGACGTGTTTT ACACCCCTGTCTCAGAGTACCGGTGGAAGTTTTTTCCCCGACATCAGGGC ATAAAAATTCTGGATAAAAATCTTTATGGAAATCTCTATGGAAATCTAAA TGGGGAGAAATTCTACTGACTCAAAAGTTCCAGTTGGGATGTTTATGAAA TGCAATTTCCTTTGGACTTCAAATCGGGATGAACTTAAGGTCAATTTTTC AGTGGGGCTAAAATAGTAGTGTATTTTTTCAACAGGGACGACATTTTACA GTGTGGCGGGGTATCAACAAGTTTGTGACACTTGGTGTATTACACAAAAG TTCCTCAATAGTAAAACACCCCCTTCTCACATACCCGGTAGGCTTTTTTC AGCCAGTGGGGATAAAAATAACGGACTTAAACTCGATGGGGATTGATATT CCCACATTTGTTATGCCTGGGGATTTAAATTGTATTGTTTGCAAGTCAGA AAAATTCAGTGAGGACGAAATTTGGGGGTTAATTTTCCATCGGGGACGTT ACTTTGGCAAATTTTTTCTGTGGGAAGGGGTCCCAGTGGGTCTATGAGAA GGAGGTGTAGTAAATCAAATTTTGTTATATTTTAAAGATCAGATCATTCA AGGAGCAATACGAGAGGGAGAGAGAAGAGAAAGAAAAGGAGAAATCGAAG AACAAAAATTTGAAAAGGAAGTTGGCAGAAAATGAAGAAGTCACATTTCA ATTGCATCAAAGAATTGACATGTTGGAGAAGAAAATAAAGAAGATGGAAA GAACTGATAAAGTGGAACAACAAAGAAAGGTATTTTCCCAGTTGACACCC CTGTCTCACAGACCTGGTGAGACACCTGCCTCACTGGGGAATTTGGCCAA AATTTCATCCCAATTTTGCAATTCAACATCCACAATCAACAATGGAATTT TTTCGACTAAAGAACAGTATAATTTCTAACCCAATTAAAATTTCGATACA ATTTCTATTAGGGCTGTGAGACAAGGATATACCAGTTGACAGTGGATATT AATTAAGCTATGCTCATCTGACCTCGCAGATGATTATAAAATGCTATTAA AGATTTGGTATTTTGCGGTATATGTCTAGTCTCTGGCGTTTTATAATAAC GTGAGATGAACGTTATGTTCACGTTTGTGTTAAGTTAGATTTCTCACAGT AGTGTGCTAGCCGGCAGGGAGATGTAGAGGGAGATGTTCGTCAAAGTAGA AATTATTTTAAGGGGCACTGAATTGAGGCTCATCTTTGACTTGATACTGT TAGCCCCCTTTCCTCTTCCCATCTCTTCTCTTCATCTCTATTTTTGGATG TTGGAAAGTAACTTTCAAGTTGTTTATTTTTATAGTGCAACATTTTTCGT AAAGTTAAATAACCGCAAAAATGTACCACAAAACAAAACAGTAACCTTCT CAATCGAAAATTAATTAGTAGAAAGTCGTACGGCCGCAGCCTTTTTAAAT ATTTCCCGTTTTCCAAAAGGGAAATATTTGTTAAAACGGGCTTTCTCCTT CATAATAATAATAATAATTTCCCGTGTCAAAACGCCTTCCGTACGCCCTG ACTGACGCCCGTTTTTAATTTCACAGCAAAAAATGCATCCAGTGAAGTAT AAGTAATGTATCATGATTCGAGTCGACTGATAAACTATATATATAATATA TGTTACAAGTTCCTTACGGATTCTCAAGCCCGGTTATAATAAAACTATTA CATGTTAGTAGTTGACCCGACTGGCAGTTGTTATGTAGCAGGTTGAAACA TGATTTTTTGCTAGAAAGATGCAGTTTGTTTTCAAGTTAAATCTTTAAAA TAAATCAAACTGTGTGGGTTTCTTTACTTCCAAACAACCTACCAATAGTT TTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTGGTTATTGTTTGATTTC TTGACTTGTATATCTCATGGCAAATGGGATAGCAAATGACTTTTCATGTA TTGCTTGGCTCTACATATGATACCTCTAACTTTGCACAATCCAGAATGTT GAAAAAAGCATTTTATGAGATAAGTTTCGATTGTAATTTTCATGGAAATT TTTAAGCGACAGATTTGACTTGGCTTCAGTTTTGTTTGGTTGATAAATCT TTAGCTTCACCATGACCGTGGGATGATTTTCAATAAACTTTTGTTGTTAT ACACAGTCACTCTACACATGATGACTCCAGCCATGATTGGTATCAGACAG TCAGAATGTTGGAAAAAAGACATTTTACGAGAAATTGATGATAGAAATTA TATTGACTTGTTTTTACAATTTTGGTGGTGTGGGTTTTGTTGATTGATAA TGTTTACACCGTGGGATCCTGTTAGGGTATATTGATTGTTGTTTTTTGGA ATACACCGTTTAACAGTCTCGCCATCTCCACCGTACCGTAGAGAGGCGGG AGGTAGAAATGCTCACTTTAGTACTGTGGAAGGTTAGAGAGATGTAAACA TTGCCATTTTTTTCCTTCCTTTTTAAAGAGAATGTTTTAGATGGTTGAAC ATGATATTAATGACAATTTTATGTATCTCTCCTGAAAATTTCACAAAAAT TCATCAACACAAGAGGAAAAGAAGTTATGATTAAAAGGAGTTCTTTACCT ACCATTTCTCTGCTGGGTTTTCTTATGAGAACTGGATGTTTACCTACCAT TTTTTACGGGGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNACGGGGGAGAGTGAAGTTTCTCGTGGTTGCCA AAATCAAAACAATAGAAAATTGTTCATACGCGTGCGCAGCCGACACTGTT AAACGGTGTATTGATTATCAAAAAAAGAGAACCTTTTTTTGATAAATACT TTATTTTTTTCATGAACCATGTGGATGGTTGACATCTTTCTCTAGTCTAG TGTTGTAAACCAATGCAGTCTCTGTTTTCAAATCTTGAATTCTCTATACC TACTGAACTAAATATACCTTTTTTTAAAGAGGCAGCCATGTTGAATAGTT ATGTACTCCAGCATAAAAACAATGACACAGCCATGCATAATTTTTAAAAT ATACATGATACAGTAATTATGCATGGCTGTATCATTGTTTTTATGCTGGA GTACATAATTATTCAATATGGCTGCCTCTTTAAAAAAAGGTCTACTGTTT AAAGCTATTTAAATGCTTTAAAACTTTGAGCCACAGTTTTTTCTTTGTTG CTATTAAAGATAGATTCTTACTTTGTCGTAATGTAAATTTATTGTAAAGT TTTAGTTTTTGAGTTTAGTTCATCTGCAGTAGTATTTTTTCAGTGATCCT TAAATCTTGTGAATAAAGTAACATTTAACCAGACTTATTGCCCTCATTAT ATTCAAATTTGTATTTTTTTTAGGACTGATAAGTACATATTTTTAAACAC CAAAACAAAGCAAACAACATGCCAGTTCTTTCTGGACAAATATATATTTT ATTTTTATTTCCGTCTCTTTAATCACTCTTTATGAGTATATATAAACACA TCTAAAAAATATAATATACTTTATTATGTGTGCTTTTTTATATATGTCAA TAATGATCTTCATTTTTAAGGAAATATTTAGTCGCAATTTTGCGATTCTT GTTTGCTTTCAAAAGCATACTAATCAATTTGTCTTAAAAATTGGGGAAAT CTAGAATGTTCTTTAAGTCTTTTCTGCAACGCATAGCGTTCTAAATCTGA TGTCTAAACGTGCATTACTGTAATTGACGTCAGAATGTCTTTTTACCATA TTAGATAAATTTGCAATAAATGAATTTAATTTAAAACTACTATGTAAAAT TGCTAAGCTTTACAGAAACATTTTCAGGGAATGTCATTTTTTTTCGGAAA TTAATTCCACTCGAAAATAAGGCTGGTCCGGAAAAGCAAAATTTAACAAA TTGTTGGGCAAATAAAAAGTTAAAAATGAAACTAAAATGTAACAACAAAT TTTTTTACTGACGTTTCGACGGTGTGGTAGGAAAAACGTTGACGGAAAGT TGGAATAATTAGGTATCCTCTGAACCTCTGCCGGAAGAATAATAAGCTCG AAGATTTGTAAATTAAATATTTTCTTTCTACAGGCTGATCTTATGGGGCG AGGTGCTTTCCCGAGAAACGAGCTTGGTTTCACTGGGTATAAAGACGAGA GGGATTCCATGGCACCTAGATATCAACAACAACAGCAACAACAATTGCAT CAACATAATCGAAGGGAATTTGAAGGTGGAACTACTGAACTCAAACACCA AAAATTCCGACAAATTTATCCCTTAATTTATTGAAACAGATTGAAATAAT ATTTCCACTGCTCTTATTTAAATTCTCAAAAGAATATTTCAACCGATCAA GCATCTAATCTTATTGTATGTAACGTTGTTTAATATGCACACATTCTGAA AAATTTCCGTAAATTTATTTTACCCTCTTTTGGGCGCGTTACAAGGGACT CCAGGGAATCAAGGCGGGGTCCTAATGCTTGCAATATTACGTAGTAAAAA TAGTGCGAGATCGTGGTTTTCTGCAAATTATGCAAAATTTTTTAGATTTG TTAAAAAATGTAAATCTTACTGGAGCAGCTTATGACGTCACCAGGAAATA TGGCAGATTTTTGGCAATTGGAACCATTAAGAAAAGGTCTAATAAACAAA ATTTAAAAAACAACACCATTTCTTTATCTACATATTTCACGATCTTTCAG ATAAAATACTCGAAATTTATTTTTGAAAACTTCTTGCAATGACCCCCAAA TCGAATGCGGGTTTTCTTGGTGGTTCTGGGACCAAAGGAACTCCTGTCAA GGCTAGAATCTTTTTTGAGCTAACTCTACTACCCTTCTTCACAACCAAAC ATGAAG

Coding sequence (CDS) from alignment at scaffold_251:592736..599491-

>TCONS_00055235 ID=TCONS_00055235|Name=TCONS_00055235|organism=Clytia hemisphaerica|type=CDS|length=4800bp|location=Sequence derived from alignment at scaffold_251:592736..599491- (Clytia hemisphaerica)
GCTGATCTTATGGGGCGAGGTGCTTTCCCGAGAAACGAGCTTGGTTTCAC
TGGGTATAAAGACGAGAGGGATTCCATGGCACCTAGATATCAACAACAAC
AGCAACAACAATTGCATCAACATAATCGAAGGGAATTTGAAGGTGGAACT
ACTGAACTCAAACACCAAAAATTCCGACAAATTTATCCCTTAATTTATTG
AATCAGATCATTCAAGGAGCAATACGAGAGGGAGAGAGAAGAGAAAGAAA
AGGAGAAATCGAAGAACAAAAATTTGAAAAGGAAGTTGGCAGAAAATGAA
GAAGTCACATTTCAATTGCATCAAAGAATTGACATGTTGGAGAAGAAAAT
AAAGAAGATGGAAAGAACTGATAAAGTGGAACAACAAAGAAAGCTTGTGC
AAGTCAACGGTATATGGAAGAGGGATTACGAAGATCTACTTCATCAAAAC
CAAAAATTAAAAGCAGCTCTCGGTATGAATCCACATTCGAGTCGATCAAC
TCGGTCTAACTCACCTAACCGTCACTTACAACAAACAAACACTGGACAAG
ACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTA
CAACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAACTCGGTC
TAACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAAGACCCAT
ACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTGCATGAA
ACTAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTC
ACCTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTACAGTTAG
CCAACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGAGTTATCA
ACTCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCACCGAGACC
ACACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCTTCACACT
CGATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGATAGTCAA
CACCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATATTCAATG
CGCTGTTGCGGATATAGAGAAAATGAAAGAACAGATGAGTGGAAGTGAGA
AGCAGCCAGCACCCTACACCAATGAAGAATATGACAAGCAGATTGCAGAG
GCTGATCTTATGGGGCGAGGTGCTTTCCCGAGAAACGAGCTTGGTTTCAC
TGGGTATAAAGACGAGAGGGATTCCATGGCACCTAGATATCAACAACAAC
AGCAACAACAATTGCATCAACATAATCGAAGGGAATTTGAAGGTGGAACT
ACTGAACTCAAACACCAAAAATTCCGACAAATTTATCCCTTAATTTATTG
AATCAGATCATTCAAGGAGCAATACGAGAGGGAGAGAGAAGAGAAAGAAA
AGGAGAAATCGAAGAACAAAAATTTGAAAAGGAAGTTGGCAGAAAATGAA
GAAGTCACATTTCAATTGCATCAAAGAATTGACATGTTGGAGAAGAAAAT
AAAGAAGATGGAAAGAACTGATAAAGTGGAACAACAAAGAAAGCTTGTGC
AAGTCAACGGTATATGGAAGAGGGATTACGAAGATCTACTTCATCAAAAC
CAAAAATTAAAAGCAGCTCTCGGTATGAATCCACATTCGAGTCGATCAAC
TCGGTCTAACTCACCTAACCGTCACTTACAACAAACAAACACTGGACAAG
ACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTA
CAACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAACTCGGTC
TAACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAAGACCCAT
ACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTGCATGAA
ACTAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTC
ACCTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTACAGTTAG
CCAACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGAGTTATCA
ACTCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCACCGAGACC
ACACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCTTCACACT
CGATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGATAGTCAA
CACCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATATTCAATG
CGCTGTTGCGGATATAGAGAAAATGAAAGAACAGATGAGTGGAAGTGAGA
AGCAGCCAGCACCCTACACCAATGAAGAATATGACAAGCAGATTGCAGAG
GCTGATCTTATGGGGCGAGGTGCTTTCCCGAGAAACGAGCTTGGTTTCAC
TGGGTATAAAGACGAGAGGGATTCCATGGCACCTAGATATCAACAACAAC
AGCAACAACAATTGCATCAACATAATCGAAGGGAATTTGAAGGTGGAACT
ACTGAACTCAAACACCAAAAATTCCGACAAATTTATCCCTTAATTTATTG
AATCAGATCATTCAAGGAGCAATACGAGAGGGAGAGAGAAGAGAAAGAAA
AGGAGAAATCGAAGAACAAAAATTTGAAAAGGAAGTTGGCAGAAAATGAA
GAAGTCACATTTCAATTGCATCAAAGAATTGACATGTTGGAGAAGAAAAT
AAAGAAGATGGAAAGAACTGATAAAGTGGAACAACAAAGAAAGCTTGTGC
AAGTCAACGGTATATGGAAGAGGGATTACGAAGATCTACTTCATCAAAAC
CAAAAATTAAAAGCAGCTCTCGGTATGAATCCACATTCGAGTCGATCAAC
TCGGTCTAACTCACCTAACCGTCACTTACAACAAACAAACACTGGACAAG
ACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTA
CAACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAACTCGGTC
TAACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAAGACCCAT
ACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTGCATGAA
ACTAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTC
ACCTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTACAGTTAG
CCAACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGAGTTATCA
ACTCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCACCGAGACC
ACACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCTTCACACT
CGATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGATAGTCAA
CACCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATATTCAATG
CGCTGTTGCGGATATAGAGAAAATGAAAGAACAGATGAGTGGAAGTGAGA
AGCAGCCAGCACCCTACACCAATGAAGAATATGACAAGCAGATTGCAGAG
GCTGATCTTATGGGGCGAGGTGCTTTCCCGAGAAACGAGCTTGGTTTCAC
TGGGTATAAAGACGAGAGGGATTCCATGGCACCTAGATATCAACAACAAC
AGCAACAACAATTGCATCAACATAATCGAAGGGAATTTGAAGGTGGAACT
ACTGAACTCAAACACCAAAAATTCCGACAAATTTATCCCTTAATTTATTG
AATCAGATCATTCAAGGAGCAATACGAGAGGGAGAGAGAAGAGAAAGAAA
AGGAGAAATCGAAGAACAAAAATTTGAAAAGGAAGTTGGCAGAAAATGAA
GAAGTCACATTTCAATTGCATCAAAGAATTGACATGTTGGAGAAGAAAAT
AAAGAAGATGGAAAGAACTGATAAAGTGGAACAACAAAGAAAGCTTGTGC
AAGTCAACGGTATATGGAAGAGGGATTACGAAGATCTACTTCATCAAAAC
CAAAAATTAAAAGCAGCTCTCGGTATGAATCCACATTCGAGTCGATCAAC
TCGGTCTAACTCACCTAACCGTCACTTACAACAAACAAACACTGGACAAG
ACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTA
CAACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAACTCGGTC
TAACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAAGACCCAT
ACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTGCATGAA
ACTAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTC
ACCTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTACAGTTAG
CCAACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGAGTTATCA
ACTCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCACCGAGACC
ACACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCTTCACACT
CGATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGATAGTCAA
CACCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATATTCAATG
CGCTGTTGCGGATATAGAGAAAATGAAAGAACAGATGAGTGGAAGTGAGA
AGCAGCCAGCACCCTACACCAATGAAGAATATGACAAGCAGATTGCAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034786XLOC_034786Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055235-exon-scaffold_251-1575043694:599149..599491TCONS_00055235-exon-scaffold_251-1575043694:599149..599491Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1575043694:597916..598656TCONS_00055235-exon-scaffold_251-1575043694:597916..598656Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1575043694:597063..597254TCONS_00055235-exon-scaffold_251-1575043694:597063..597254Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1575043694:592736..593508TCONS_00055235-exon-scaffold_251-1575043694:592736..593508Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1510915933:599149..599491TCONS_00055235-exon-scaffold_251-1510915933:599149..599491Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1510915933:597916..598656TCONS_00055235-exon-scaffold_251-1510915933:597916..598656Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1510915933:597063..597254TCONS_00055235-exon-scaffold_251-1510915933:597063..597254Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1510915933:592736..593508TCONS_00055235-exon-scaffold_251-1510915933:592736..593508Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1491911889:599149..599491TCONS_00055235-exon-scaffold_251-1491911889:599149..599491Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1491911889:597916..598656TCONS_00055235-exon-scaffold_251-1491911889:597916..598656Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1491911889:597063..597254TCONS_00055235-exon-scaffold_251-1491911889:597063..597254Clytia hemisphaericaexon
TCONS_00055235-exon-scaffold_251-1491911889:592736..593508TCONS_00055235-exon-scaffold_251-1491911889:592736..593508Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055235-proteinTCONS_00055235-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:592736..599491 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.2268 13.4369 8.33714 9.1714 7.95695 6.74917 27.9146 32.3686 127.081 112.858 128 113.191 332.003 303.431 193.059 123.818 158.899 170.343 493.134 450.542 158.888 147.846 118.053 140.746 294.456 280.12 157.55 225.51 79.8921 83.815
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055235 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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